Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is purC
Identifier: 119945558
GI number: 119945558
Start: 2262408
End: 2263511
Strand: Reverse
Name: purC
Synonym: Ping_1862
Alternate gene names: 119945558
Gene position: 2263511-2262408 (Counterclockwise)
Preceding gene: 119945560
Following gene: 119945555
Centisome position: 49.64
GC content: 40.04
Gene sequence:
>1104_bases ATGAGTCTTGCCGACAAAGTATTAGCTGTTAATAATGATCTACCCATTCGCTCCACACAACCTGTGCACAGTGGTAAAGT ACGCTCAGTCTATTGGTTAACAGAATCCGATAGCCGCCGTCTAATCGCAGAAAAAGGTTATAATGTTGCAGCCGATGCGC CACTGGCTATTATGGTTATTAGTGATCGTATCTCTGCTTTTGATTGCATTTGGCACGCAGAAGGTGGCATGAATGGCGTA CCGGGAAAAGGGGCTGCCCTTAATGCTATTTCTAACCATTGGTTCAAACTGTTTAAGGATCAGGGACTCGCTGATAGTCA TATCTTAGATATCCCCCATCCGTTAGTTTGGATAGTACAAAAAGCCCGACCGGTAATGATTGAAGCGATTTGCCGTCAAT ATATCACCGGTTCAATGTGGCGCGCTTACGAAAAGGGGGAACGTGAATTCTGTGGTATTGAAATAGCAGATGGGTTGAAA AAAGATCAAAAATTACCCGAATTACTGACCACACCTTCAACTAAAGGAATTCTTGAGGGGATTCCCGGCGTAGCAGCCGT GGATGATGTCAATATTACCCGTCAAAATATAGAAGATAACTTTGCTGCTTTTAACTTTACCACAACACAAGACATTGCTC TTTATGAGAAATTATTAAAAGAAGGCTTTAACGTTATAAGTCATGAATTAGCTAAAATCGGTCAGATTTTTGTGGATACT AAATTTGAATTTGGTTACGTGAAGGATAAAGCGGGCAATGAGAAACTCATCTATATGGATGAAGTGGGTACACCTGATTC ATCGCGGATTTGGGATGCGGCAGAATACCAAAAAGGGAATATTGTAGAAAACTCTAAAGAAGATTTCCGACAGTTATTAT TAAATCACTTCCCTGATCCGGATATTCTGTTAAACAAAGACCGGATGGCGGAGAGAAGTGATCTTGCTAAAAATAATGCC CTTCCAGCGGCAGTATTAATGAAAATATCTGCAACCTATATTAGCATTGCTGAAAAAATCATTGGTCATAAAATAACACT TTCGGATAATCCAAAAGCTGAAATCATTGAAATTCTTGACAGGCAGTATGGTTTAATTGACTAG
Upstream 100 bases:
>100_bases GAAATGCACCGGTAAATCTATTCTGCTATTATGATCCATCTAATCTATTCCGAGACAAGGCACTCTTGTTTCATCTAAAT TTTCATATAGGAAGTTGTTT
Downstream 100 bases:
>100_bases AAATATTCTAAAATAATAATAGCAGGGATTTTTCCTGCTATTTATACTTACTGAGACCTGTTTGGAAAGTGGAACATAGG CCCACCTTGGATATTGAACG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSLADKVLAVNNDLPIRSTQPVHSGKVRSVYWLTESDSRRLIAEKGYNVAADAPLAIMVISDRISAFDCIWHAEGGMNGV PGKGAALNAISNHWFKLFKDQGLADSHILDIPHPLVWIVQKARPVMIEAICRQYITGSMWRAYEKGEREFCGIEIADGLK KDQKLPELLTTPSTKGILEGIPGVAAVDDVNITRQNIEDNFAAFNFTTTQDIALYEKLLKEGFNVISHELAKIGQIFVDT KFEFGYVKDKAGNEKLIYMDEVGTPDSSRIWDAAEYQKGNIVENSKEDFRQLLLNHFPDPDILLNKDRMAERSDLAKNNA LPAAVLMKISATYISIAEKIIGHKITLSDNPKAEIIEILDRQYGLID
Sequences:
>Translated_367_residues MSLADKVLAVNNDLPIRSTQPVHSGKVRSVYWLTESDSRRLIAEKGYNVAADAPLAIMVISDRISAFDCIWHAEGGMNGV PGKGAALNAISNHWFKLFKDQGLADSHILDIPHPLVWIVQKARPVMIEAICRQYITGSMWRAYEKGEREFCGIEIADGLK KDQKLPELLTTPSTKGILEGIPGVAAVDDVNITRQNIEDNFAAFNFTTTQDIALYEKLLKEGFNVISHELAKIGQIFVDT KFEFGYVKDKAGNEKLIYMDEVGTPDSSRIWDAAEYQKGNIVENSKEDFRQLLLNHFPDPDILLNKDRMAERSDLAKNNA LPAAVLMKISATYISIAEKIIGHKITLSDNPKAEIIEILDRQYGLID >Mature_366_residues SLADKVLAVNNDLPIRSTQPVHSGKVRSVYWLTESDSRRLIAEKGYNVAADAPLAIMVISDRISAFDCIWHAEGGMNGVP GKGAALNAISNHWFKLFKDQGLADSHILDIPHPLVWIVQKARPVMIEAICRQYITGSMWRAYEKGEREFCGIEIADGLKK DQKLPELLTTPSTKGILEGIPGVAAVDDVNITRQNIEDNFAAFNFTTTQDIALYEKLLKEGFNVISHELAKIGQIFVDTK FEFGYVKDKAGNEKLIYMDEVGTPDSSRIWDAAEYQKGNIVENSKEDFRQLLLNHFPDPDILLNKDRMAERSDLAKNNAL PAAVLMKISATYISIAEKIIGHKITLSDNPKAEIIEILDRQYGLID
Specific function: Unknown
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=347, Percent_Identity=27.9538904899135, Blast_Score=99, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PUR7_PSYIN (A1SVX4)
Other databases:
- EMBL: CP000510 - RefSeq: YP_943238.1 - ProteinModelPortal: A1SVX4 - SMR: A1SVX4 - STRING: A1SVX4 - GeneID: 4625245 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_1862 - eggNOG: COG0152 - HOGENOM: HBG555040 - OMA: SSRIWDG - PhylomeDB: A1SVX4 - ProtClustDB: PRK13960 - BioCyc: PING357804:PING_1862-MONOMER - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR014106 - InterPro: IPR001636 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR02735
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 40972; Mature: 40841
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLADKVLAVNNDLPIRSTQPVHSGKVRSVYWLTESDSRRLIAEKGYNVAADAPLAIMVI CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCEECCCCEEEEEE SDRISAFDCIWHAEGGMNGVPGKGAALNAISNHWFKLFKDQGLADSHILDIPHPLVWIVQ CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHH KARPVMIEAICRQYITGSMWRAYEKGEREFCGIEIADGLKKDQKLPELLTTPSTKGILEG HCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHCCHHHHHCHHHHCCCCCCHHHHC IPGVAAVDDVNITRQNIEDNFAAFNFTTTQDIALYEKLLKEGFNVISHELAKIGQIFVDT CCCCEEECCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC KFEFGYVKDKAGNEKLIYMDEVGTPDSSRIWDAAEYQKGNIVENSKEDFRQLLLNHFPDP CEEECEEECCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCC DILLNKDRMAERSDLAKNNALPAAVLMKISATYISIAEKIIGHKITLSDNPKAEIIEILD CEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH RQYGLID HHCCCCC >Mature Secondary Structure SLADKVLAVNNDLPIRSTQPVHSGKVRSVYWLTESDSRRLIAEKGYNVAADAPLAIMVI CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCEECCCCEEEEEE SDRISAFDCIWHAEGGMNGVPGKGAALNAISNHWFKLFKDQGLADSHILDIPHPLVWIVQ CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHH KARPVMIEAICRQYITGSMWRAYEKGEREFCGIEIADGLKKDQKLPELLTTPSTKGILEG HCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHCCHHHHHCHHHHCCCCCCHHHHC IPGVAAVDDVNITRQNIEDNFAAFNFTTTQDIALYEKLLKEGFNVISHELAKIGQIFVDT CCCCEEECCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC KFEFGYVKDKAGNEKLIYMDEVGTPDSSRIWDAAEYQKGNIVENSKEDFRQLLLNHFPDP CEEECEEECCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCC DILLNKDRMAERSDLAKNNALPAAVLMKISATYISIAEKIIGHKITLSDNPKAEIIEILD CEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH RQYGLID HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA