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The map label for this gene is ychK [C]

Identifier: 119945540

GI number: 119945540

Start: 2241279

End: 2242154

Strand: Reverse

Name: ychK [C]

Synonym: Ping_1844

Alternate gene names: 119945540

Gene position: 2242154-2241279 (Counterclockwise)

Preceding gene: 119945555

Following gene: 119945539

Centisome position: 49.17

GC content: 40.41

Gene sequence:

>876_bases
ATGACAAAAATAAAGAAAAAAACAGTTTCTCTCGTACTTGGCAGTGGAGGCGCGAGGGGAATGGCGCACATTGGCGTAAT
ACGCTGGTTATTAACCCATGGTTACGAAATAAAATCAATCTCCGGTAGTTCGGTTGGTGCATTGGTAGGCGGTATGTATG
CAGCGGGAAAATTGGATGAATTTGAAGCATGGGCCGCGAGTATTACAACGCTCTACAAATTGAAATTATTTTATATTAAT
TGGAACCATGAAGCACGTGGCGATAAAATAATGAATGTTTTAATCGAGCTTTTTGGTGATTATAAGATAGAAGATTTGCC
TATCACCTATACTGCCGTTGCATCGGACATTAGAAATGAAAAAGAGATTTGGATAAACAAAGGATCCTTGTTTCAAGCAC
TGCGCGCATCTATGGCAATGCCTTTGTTTTTTACCCCTGTTGTCCGTAACGGGGTTGACCTCATTGATGGTGGCGTTTTA
AACCCAGTCCCTATTGCCCCCACTTTTAGCGACCATACGGATTTAACTATTGCAGTAAATCTTGGCGGACCCATTCATCA
TCAACAACATAAATTAGCAGAAAAACCTCACAACGGCTTGGGCATCCCGGTAAACTTAGACGCGATAACGAAACATTTTT
CCCCAAGTAAAAAAATGCAACAGGAAAAAGGCATTGATTGGAAAATATACAATATTGCAGAATTGGCTATTGATGCCATG
CAAAGTACTATTGCACGTCAAAAATTAGCGGCTTATCCTGCTGATCATATTATTGAAATATCAAGAGATGCTTGCGGTAC
CCTGGAATTTGAACGTTCCGCAGAAATGGTAAAATTAGGTTATCAAATGGCAGATCGTTGCCTGCAGAATGTCTAA

Upstream 100 bases:

>100_bases
GATAAAAGTGAACGTTGATCTTCCCAGTCTAACAAAATATTGCGTTAAACAGTATCTGCTTCGAACCACAAAGATTAACA
CTTAATATGTAAGGCTCACC

Downstream 100 bases:

>100_bases
TTGAATGTCTGATGAATACACAGCTCAGAATGATTTTTCCTAAAGCGGTGAAAAAATTAAAATAATGACTCATTTATGGT
AGTAAGTGAGTCATTGTTGC

Product: patatin-like protein of phospholipase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTKIKKKTVSLVLGSGGARGMAHIGVIRWLLTHGYEIKSISGSSVGALVGGMYAAGKLDEFEAWAASITTLYKLKLFYIN
WNHEARGDKIMNVLIELFGDYKIEDLPITYTAVASDIRNEKEIWINKGSLFQALRASMAMPLFFTPVVRNGVDLIDGGVL
NPVPIAPTFSDHTDLTIAVNLGGPIHHQQHKLAEKPHNGLGIPVNLDAITKHFSPSKKMQQEKGIDWKIYNIAELAIDAM
QSTIARQKLAAYPADHIIEISRDACGTLEFERSAEMVKLGYQMADRCLQNV

Sequences:

>Translated_291_residues
MTKIKKKTVSLVLGSGGARGMAHIGVIRWLLTHGYEIKSISGSSVGALVGGMYAAGKLDEFEAWAASITTLYKLKLFYIN
WNHEARGDKIMNVLIELFGDYKIEDLPITYTAVASDIRNEKEIWINKGSLFQALRASMAMPLFFTPVVRNGVDLIDGGVL
NPVPIAPTFSDHTDLTIAVNLGGPIHHQQHKLAEKPHNGLGIPVNLDAITKHFSPSKKMQQEKGIDWKIYNIAELAIDAM
QSTIARQKLAAYPADHIIEISRDACGTLEFERSAEMVKLGYQMADRCLQNV
>Mature_290_residues
TKIKKKTVSLVLGSGGARGMAHIGVIRWLLTHGYEIKSISGSSVGALVGGMYAAGKLDEFEAWAASITTLYKLKLFYINW
NHEARGDKIMNVLIELFGDYKIEDLPITYTAVASDIRNEKEIWINKGSLFQALRASMAMPLFFTPVVRNGVDLIDGGVLN
PVPIAPTFSDHTDLTIAVNLGGPIHHQQHKLAEKPHNGLGIPVNLDAITKHFSPSKKMQQEKGIDWKIYNIAELAIDAMQ
STIARQKLAAYPADHIIEISRDACGTLEFERSAEMVKLGYQMADRCLQNV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=291, Percent_Identity=27.8350515463918, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI148727290, Length=291, Percent_Identity=27.8350515463918, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI260656039, Length=184, Percent_Identity=32.0652173913043, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI260656037, Length=184, Percent_Identity=32.0652173913043, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI260656043, Length=184, Percent_Identity=32.0652173913043, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI260656041, Length=184, Percent_Identity=32.0652173913043, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI116256487, Length=184, Percent_Identity=32.0652173913043, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI226510936, Length=297, Percent_Identity=31.3131313131313, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71997299, Length=148, Percent_Identity=30.4054054054054, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=148, Percent_Identity=30.4054054054054, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=187, Percent_Identity=29.4117647058824, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32118; Mature: 31986

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIKKKTVSLVLGSGGARGMAHIGVIRWLLTHGYEIKSISGSSVGALVGGMYAAGKLDE
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCHH
FEAWAASITTLYKLKLFYINWNHEARGDKIMNVLIELFGDYKIEDLPITYTAVASDIRNE
HHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCEEHHHHHHHHCCC
KEIWINKGSLFQALRASMAMPLFFTPVVRNGVDLIDGGVLNPVPIAPTFSDHTDLTIAVN
CEEEEECHHHHHHHHHHHCCCCEEHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEEEE
LGGPIHHQQHKLAEKPHNGLGIPVNLDAITKHFSPSKKMQQEKGIDWKIYNIAELAIDAM
CCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHCCCCHHHHHHHCCCCEEEEHHHHHHHHHH
QSTIARQKLAAYPADHIIEISRDACGTLEFERSAEMVKLGYQMADRCLQNV
HHHHHHHHHHHCCCHHEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKIKKKTVSLVLGSGGARGMAHIGVIRWLLTHGYEIKSISGSSVGALVGGMYAAGKLDE
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCHH
FEAWAASITTLYKLKLFYINWNHEARGDKIMNVLIELFGDYKIEDLPITYTAVASDIRNE
HHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCEEHHHHHHHHCCC
KEIWINKGSLFQALRASMAMPLFFTPVVRNGVDLIDGGVLNPVPIAPTFSDHTDLTIAVN
CEEEEECHHHHHHHHHHHCCCCEEHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEEEE
LGGPIHHQQHKLAEKPHNGLGIPVNLDAITKHFSPSKKMQQEKGIDWKIYNIAELAIDAM
CCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHCCCCHHHHHHHCCCCEEEEHHHHHHHHHH
QSTIARQKLAAYPADHIIEISRDACGTLEFERSAEMVKLGYQMADRCLQNV
HHHHHHHHHHHCCCHHEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]