Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is maeA [H]
Identifier: 119945447
GI number: 119945447
Start: 2122690
End: 2124405
Strand: Reverse
Name: maeA [H]
Synonym: Ping_1744
Alternate gene names: 119945447
Gene position: 2124405-2122690 (Counterclockwise)
Preceding gene: 119945457
Following gene: 119945445
Centisome position: 46.59
GC content: 40.85
Gene sequence:
>1716_bases ATGGGTAAAGGTAAATATTTAAAATGGGAAGATTCTGAGGGTAACGTTTTTAGACCTGTTTCCCTTACTGGAAACGAATT ACTCAACAATAGGACGCTCAATAAGAGTACGGCATTTACTTATCAAGAGCGTGAAGATTTTGATCTTAATGGTCTTTTAC CACCACGCGTACAAACCTTTGAAGATCAACTGAAACGGGTTTACCAGGGATTTAGCGCTTCCTCTACGGATATTGAAAAA TACCAATATTTACGTGCCTTGCAGGATAGGAATGAAACATTATTTTATGCCCTTATCTCACGTAATATTGAAGAGATGAC GCCTATTATCTATACCCCGACGGTAGGTAAAGCCTGTCAAGAATTTAGCCATAGGTTTCAAATAGCCAGAGGACTTTATT TAACAACGGATAATATTCATGATGTCGGCAGCATGGCACGAGAATTTACAGGTAAAGATATCCAAATTATCGTTGTAACA GATAGCCAGGGCATTCTTGGCATTGGCGATCAAGGTGTTGGAGGAATGGGCATACCAATTGGTAAATTATCACTTTATAC CTTAGGTGCCGGTATTCACCCGGATCATTGCATGCCAATCGCATTAGACATAGGGACAGATAATCAGGATTTACTTGCTG ATCCTATGTATTTAGGGATTCCCAAAAAACGTTTAACAGGTGAACCTTATAAAGCGTTTATTAAAACCTTTGTTGAACAG GTGAAATTACATTTTCCAAAAGCCGTTTTGCAATGGGAAGATTTCAGTAAATCTAACGCCTTTGATAATTTATCTGATTA CGAAGATGAGTTGCCATCATTTAATGATGACGTACAAGGCACGGGTGCTGTTGTATTAGCCGGGATAATTGGCTCCACAA AAATGAAAGGTGAAACATTAATAGATCAGACTTATGCTGTTTACGGCGCAGGAGCAGGTGGTGTTGGTGTTGCCGATCAA ATTTTTGCGGGTTTACTTAAAGAAGGTCTGTCCCACCAAGAGGCGCGCGATAGAATATTTATCCTTGATTCCCGCGGTGT GGTGTTTGCAGATAGAGAAGGTTTAGATGAATACAAAAAACGTTTTGCTAAACCTGTTGAGTTAGCAAAAGATTGGCAAC TGGCAGATAGCAATAAGGTCAATCTTACTGAGTTACTCGATAATGTTCCCGTTACCGTTTTATTAGGCTGCAGTGGTGTA GGTGGTGCATTTAAAGAGCATCATATTAAGAAAATGTTAGATCATACAGCACGACCTATGATCTTCCCGCTTTCTAACCC AACCAGTTGTTGTGAAGCGGTGCCGGAAGATATTTATAAGTGGTCCGATGGCCAAGCTATTGTTGCAACGGGCAGTCCTT TTGCTGATCTGCATTTTAAGGACAATATCTATCGCATCGGACAGGGAAATAACATCTTTATTTTCCCCGGTGTCGGGCTC GCAGCGATCACTGCTGAAGTGAAAAAAATCACCAAGGATATGTTTACTACTGCCTCTTTTGCATTAGCCGATTATGTGTC ACAAGAAGATCTTGATGCAGGTTGCGTATTTCCAAAAATTAGTGAGCTGAGAGATGTTTCTCTCCATGTTGCTAAGGCAA TACTTGAGCAAATTCAGCAAACGGATCCTGAGTGTCATCTGCGTGATAAAGATATCACTAAAGAGCTTGCATTACGGATG TGGGAACCGGCGTACTTGCCCTACCGCAGAGCTTAA
Upstream 100 bases:
>100_bases AATACTTTTATTAATGATATTACGGGGTATAGTTCAGTTCATTCGAATGCTTTATCTTAGCTGCCAGTATTCGAATACTA TAATAATAATGGAGAGCGTA
Downstream 100 bases:
>100_bases AACCACCAGCCCTGTTAAATAACAGGGCTTTTTTTTAACCGGTAAACGATTATCTCTTCAAAACTCAACTTCCTGAACCA TCAAAAGAGGATTCACAACC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME 2 [H]
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MGKGKYLKWEDSEGNVFRPVSLTGNELLNNRTLNKSTAFTYQEREDFDLNGLLPPRVQTFEDQLKRVYQGFSASSTDIEK YQYLRALQDRNETLFYALISRNIEEMTPIIYTPTVGKACQEFSHRFQIARGLYLTTDNIHDVGSMAREFTGKDIQIIVVT DSQGILGIGDQGVGGMGIPIGKLSLYTLGAGIHPDHCMPIALDIGTDNQDLLADPMYLGIPKKRLTGEPYKAFIKTFVEQ VKLHFPKAVLQWEDFSKSNAFDNLSDYEDELPSFNDDVQGTGAVVLAGIIGSTKMKGETLIDQTYAVYGAGAGGVGVADQ IFAGLLKEGLSHQEARDRIFILDSRGVVFADREGLDEYKKRFAKPVELAKDWQLADSNKVNLTELLDNVPVTVLLGCSGV GGAFKEHHIKKMLDHTARPMIFPLSNPTSCCEAVPEDIYKWSDGQAIVATGSPFADLHFKDNIYRIGQGNNIFIFPGVGL AAITAEVKKITKDMFTTASFALADYVSQEDLDAGCVFPKISELRDVSLHVAKAILEQIQQTDPECHLRDKDITKELALRM WEPAYLPYRRA
Sequences:
>Translated_571_residues MGKGKYLKWEDSEGNVFRPVSLTGNELLNNRTLNKSTAFTYQEREDFDLNGLLPPRVQTFEDQLKRVYQGFSASSTDIEK YQYLRALQDRNETLFYALISRNIEEMTPIIYTPTVGKACQEFSHRFQIARGLYLTTDNIHDVGSMAREFTGKDIQIIVVT DSQGILGIGDQGVGGMGIPIGKLSLYTLGAGIHPDHCMPIALDIGTDNQDLLADPMYLGIPKKRLTGEPYKAFIKTFVEQ VKLHFPKAVLQWEDFSKSNAFDNLSDYEDELPSFNDDVQGTGAVVLAGIIGSTKMKGETLIDQTYAVYGAGAGGVGVADQ IFAGLLKEGLSHQEARDRIFILDSRGVVFADREGLDEYKKRFAKPVELAKDWQLADSNKVNLTELLDNVPVTVLLGCSGV GGAFKEHHIKKMLDHTARPMIFPLSNPTSCCEAVPEDIYKWSDGQAIVATGSPFADLHFKDNIYRIGQGNNIFIFPGVGL AAITAEVKKITKDMFTTASFALADYVSQEDLDAGCVFPKISELRDVSLHVAKAILEQIQQTDPECHLRDKDITKELALRM WEPAYLPYRRA >Mature_570_residues GKGKYLKWEDSEGNVFRPVSLTGNELLNNRTLNKSTAFTYQEREDFDLNGLLPPRVQTFEDQLKRVYQGFSASSTDIEKY QYLRALQDRNETLFYALISRNIEEMTPIIYTPTVGKACQEFSHRFQIARGLYLTTDNIHDVGSMAREFTGKDIQIIVVTD SQGILGIGDQGVGGMGIPIGKLSLYTLGAGIHPDHCMPIALDIGTDNQDLLADPMYLGIPKKRLTGEPYKAFIKTFVEQV KLHFPKAVLQWEDFSKSNAFDNLSDYEDELPSFNDDVQGTGAVVLAGIIGSTKMKGETLIDQTYAVYGAGAGGVGVADQI FAGLLKEGLSHQEARDRIFILDSRGVVFADREGLDEYKKRFAKPVELAKDWQLADSNKVNLTELLDNVPVTVLLGCSGVG GAFKEHHIKKMLDHTARPMIFPLSNPTSCCEAVPEDIYKWSDGQAIVATGSPFADLHFKDNIYRIGQGNNIFIFPGVGLA AITAEVKKITKDMFTTASFALADYVSQEDLDAGCVFPKISELRDVSLHVAKAILEQIQQTDPECHLRDKDITKELALRMW EPAYLPYRRA
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=520, Percent_Identity=39.8076923076923, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI62420882, Length=524, Percent_Identity=37.5954198473282, Blast_Score=386, Evalue=1e-107, Organism=Homo sapiens, GI62420880, Length=524, Percent_Identity=37.5954198473282, Blast_Score=386, Evalue=1e-107, Organism=Homo sapiens, GI239049447, Length=524, Percent_Identity=37.5954198473282, Blast_Score=386, Evalue=1e-107, Organism=Homo sapiens, GI4505145, Length=552, Percent_Identity=35.8695652173913, Blast_Score=358, Evalue=6e-99, Organism=Homo sapiens, GI270265879, Length=457, Percent_Identity=38.074398249453, Blast_Score=323, Evalue=3e-88, Organism=Escherichia coli, GI87081919, Length=551, Percent_Identity=40.8348457350272, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI1788806, Length=372, Percent_Identity=25.2688172043011, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17537199, Length=536, Percent_Identity=38.2462686567164, Blast_Score=368, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6322823, Length=561, Percent_Identity=39.9286987522282, Blast_Score=413, Evalue=1e-116, Organism=Drosophila melanogaster, GI281362674, Length=529, Percent_Identity=37.6181474480151, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI281362672, Length=529, Percent_Identity=37.6181474480151, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI21356279, Length=529, Percent_Identity=37.6181474480151, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI24646388, Length=522, Percent_Identity=39.272030651341, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI24646386, Length=522, Percent_Identity=39.272030651341, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI281363505, Length=514, Percent_Identity=35.2140077821012, Blast_Score=340, Evalue=2e-93, Organism=Drosophila melanogaster, GI78707236, Length=514, Percent_Identity=35.2140077821012, Blast_Score=340, Evalue=2e-93, Organism=Drosophila melanogaster, GI78707232, Length=510, Percent_Identity=35.2941176470588, Blast_Score=339, Evalue=3e-93, Organism=Drosophila melanogaster, GI281363503, Length=512, Percent_Identity=34.9609375, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI78707240, Length=528, Percent_Identity=33.7121212121212, Blast_Score=333, Evalue=3e-91, Organism=Drosophila melanogaster, GI78707242, Length=521, Percent_Identity=34.5489443378119, Blast_Score=332, Evalue=5e-91, Organism=Drosophila melanogaster, GI78707238, Length=521, Percent_Identity=34.5489443378119, Blast_Score=332, Evalue=5e-91, Organism=Drosophila melanogaster, GI19922384, Length=515, Percent_Identity=27.9611650485437, Blast_Score=235, Evalue=6e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 63452; Mature: 63321
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00331 MALIC_ENZYMES ; PS00422 GRANINS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKGKYLKWEDSEGNVFRPVSLTGNELLNNRTLNKSTAFTYQEREDFDLNGLLPPRVQTF CCCCCEEEEECCCCCEEEEEECCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH EDQLKRVYQGFSASSTDIEKYQYLRALQDRNETLFYALISRNIEEMTPIIYTPTVGKACQ HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCHHHCCCEEECCCHHHHHH EFSHRFQIARGLYLTTDNIHDVGSMAREFTGKDIQIIVVTDSQGILGIGDQGVGGMGIPI HHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCCCC GKLSLYTLGAGIHPDHCMPIALDIGTDNQDLLADPMYLGIPKKRLTGEPYKAFIKTFVEQ CCEEEEEECCCCCCCCCEEEEEEECCCCHHHHCCCHHCCCCHHHCCCCHHHHHHHHHHHH VKLHFPKAVLQWEDFSKSNAFDNLSDYEDELPSFNDDVQGTGAVVLAGIIGSTKMKGETL HHHHCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCCCHH IDQTYAVYGAGAGGVGVADQIFAGLLKEGLSHQEARDRIFILDSRGVVFADREGLDEYKK HHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCHHHHHH RFAKPVELAKDWQLADSNKVNLTELLDNVPVTVLLGCSGVGGAFKEHHIKKMLDHTARPM HHCCHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE IFPLSNPTSCCEAVPEDIYKWSDGQAIVATGSPFADLHFKDNIYRIGQGNNIFIFPGVGL EEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCEEEECCCCEEEEECCCCH AAITAEVKKITKDMFTTASFALADYVSQEDLDAGCVFPKISELRDVSLHVAKAILEQIQQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TDPECHLRDKDITKELALRMWEPAYLPYRRA CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GKGKYLKWEDSEGNVFRPVSLTGNELLNNRTLNKSTAFTYQEREDFDLNGLLPPRVQTF CCCCEEEEECCCCCEEEEEECCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH EDQLKRVYQGFSASSTDIEKYQYLRALQDRNETLFYALISRNIEEMTPIIYTPTVGKACQ HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCHHHCCCEEECCCHHHHHH EFSHRFQIARGLYLTTDNIHDVGSMAREFTGKDIQIIVVTDSQGILGIGDQGVGGMGIPI HHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCCCC GKLSLYTLGAGIHPDHCMPIALDIGTDNQDLLADPMYLGIPKKRLTGEPYKAFIKTFVEQ CCEEEEEECCCCCCCCCEEEEEEECCCCHHHHCCCHHCCCCHHHCCCCHHHHHHHHHHHH VKLHFPKAVLQWEDFSKSNAFDNLSDYEDELPSFNDDVQGTGAVVLAGIIGSTKMKGETL HHHHCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCCCHH IDQTYAVYGAGAGGVGVADQIFAGLLKEGLSHQEARDRIFILDSRGVVFADREGLDEYKK HHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCHHHHHH RFAKPVELAKDWQLADSNKVNLTELLDNVPVTVLLGCSGVGGAFKEHHIKKMLDHTARPM HHCCHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE IFPLSNPTSCCEAVPEDIYKWSDGQAIVATGSPFADLHFKDNIYRIGQGNNIFIFPGVGL EEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCEEEECCCCEEEEECCCCH AAITAEVKKITKDMFTTASFALADYVSQEDLDAGCVFPKISELRDVSLHVAKAILEQIQQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TDPECHLRDKDITKELALRMWEPAYLPYRRA CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 12949160 [H]