Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945420
Identifier: 119945420
GI number: 119945420
Start: 2088784
End: 2089182
Strand: Reverse
Name: 119945420
Synonym: Ping_1715
Alternate gene names: NA
Gene position: 2089182-2088784 (Counterclockwise)
Preceding gene: 119945428
Following gene: 119945418
Centisome position: 45.82
GC content: 49.87
Gene sequence:
>399_bases GTGTTTAATCGCTTCTGGCAGATCACGCCCCAGCACAAACTGGCGTCTCATTCCCATCATTGCCTGATCGAAGGCGGCAC GTACTGCCGCTTGATCATTAAATGCAGCCTATCAGCGCCACCCTCTTTTCTCAACCGGTTTGATAAGCTTGCCCGTCACA AACAGCCTAAGGCTAGCAGCATTAACCACCGGGAACTTGGACTCATCAAGGCAATCTGCACAGGTAATTTTATCTTCAAT CAGGGCATCAATACTCTACTTGTCCGGCACTCAAGCAGCGCTTCGGCCAGGCACATAAGGACTGGTTATTTAGCCCGTAC ACAAAAAATATTTCAATTATTGTCGGCGCAGCTTCTGTTCGCAAAACGCCCACCAATTCAGCCGCACGCGCGGAAATAG
Upstream 100 bases:
>100_bases AAAGCACTAGGAAATTAGCGTAATACATCAGCATCCGTTCGAGCCACTTCCCCGAGTATGTCCTATAAATAGGTATAACC ACGGGACTAATACTTTTGCT
Downstream 100 bases:
>100_bases ATATTCACTCTTCAATAGAAAGCCGAGTATCGGCCACCAAGATATTAATGACATCTGTTTCATCGGCCGGATGTGAAGCC GAATTTTTTCACGGCATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MFNRFWQITPQHKLASHSHHCLIEGGTYCRLIIKCSLSAPPSFLNRFDKLARHKQPKASSINHRELGLIKAICTGNFIFN QGINTLLVRHSSSASARHIRTGYLARTQKIFQLLSAQLLFAKRPPIQPHARK
Sequences:
>Translated_132_residues MFNRFWQITPQHKLASHSHHCLIEGGTYCRLIIKCSLSAPPSFLNRFDKLARHKQPKASSINHRELGLIKAICTGNFIFN QGINTLLVRHSSSASARHIRTGYLARTQKIFQLLSAQLLFAKRPPIQPHARK >Mature_132_residues MFNRFWQITPQHKLASHSHHCLIEGGTYCRLIIKCSLSAPPSFLNRFDKLARHKQPKASSINHRELGLIKAICTGNFIFN QGINTLLVRHSSSASARHIRTGYLARTQKIFQLLSAQLLFAKRPPIQPHARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15051; Mature: 15051
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRFWQITPQHKLASHSHHCLIEGGTYCRLIIKCSLSAPPSFLNRFDKLARHKQPKASS CCCCEEECCCCHHHHCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC INHRELGLIKAICTGNFIFNQGINTLLVRHSSSASARHIRTGYLARTQKIFQLLSAQLLF CCCHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKRPPIQPHARK HCCCCCCCCCCC >Mature Secondary Structure MFNRFWQITPQHKLASHSHHCLIEGGTYCRLIIKCSLSAPPSFLNRFDKLARHKQPKASS CCCCEEECCCCHHHHCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC INHRELGLIKAICTGNFIFNQGINTLLVRHSSSASARHIRTGYLARTQKIFQLLSAQLLF CCCHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKRPPIQPHARK HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA