Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945411
Identifier: 119945411
GI number: 119945411
Start: 2080353
End: 2080778
Strand: Reverse
Name: 119945411
Synonym: Ping_1705
Alternate gene names: NA
Gene position: 2080778-2080353 (Counterclockwise)
Preceding gene: 119945412
Following gene: 119945409
Centisome position: 45.64
GC content: 38.97
Gene sequence:
>426_bases ATGAGTTTACAACCGTTTCACTTAGCCATTCCAGTATACGATGTCCCTTTAGCTCGCCAGTTTTATCGCGAAGTTTTAGA ATTAGAAGAAGGCCGCTCTTGTGATGAATGGGTAGATTTCAATTTTTATGGTCATCAGTTAGTTATTCACCATCACTCTA AAACGACTGATCAAGATGAAAAAGAAACAAACCCGGTAGATGGTCATGATGTTCCAGTTCCTCATTTTGGGATTGTTCTT ACTTGGGAGCAGTGGGAGGAACTTGCAATGCGGCTCAAGAAACATAATGTAAAATTTGTTATTGAGCCTTATATTAGATT TAAAGGGCTTGCGGGTGAGCAAGCTACATTGTTTTTCTTAGATCCTTGCGGCAATGCTTTAGAGTTCAAGGCATTTAAAG ATATGAGCCAACTTTTCGCAAAGTAA
Upstream 100 bases:
>100_bases AATCTCTGAAAACTGCCCCCCTTGAGAAGAGCAAATATGCACTTCAAAATTGAATCTGCCACAGTTAAAGATAACGAAAT CTAATCAAAAGGAAAAAACA
Downstream 100 bases:
>100_bases GTATAAAAGAAAAGATGGAAAAAGATGGGACAGCCAAAGGTTTTCTTTTCTAAAGCACTAAACCAATGCGGATAGGCCAT TTCCGTAAGTTTTTCTTGAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase Domain Protein; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Lactoylglutathione Lyase Protein; Extradiol Dioxygenase
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLQPFHLAIPVYDVPLARQFYREVLELEEGRSCDEWVDFNFYGHQLVIHHHSKTTDQDEKETNPVDGHDVPVPHFGIVL TWEQWEELAMRLKKHNVKFVIEPYIRFKGLAGEQATLFFLDPCGNALEFKAFKDMSQLFAK
Sequences:
>Translated_141_residues MSLQPFHLAIPVYDVPLARQFYREVLELEEGRSCDEWVDFNFYGHQLVIHHHSKTTDQDEKETNPVDGHDVPVPHFGIVL TWEQWEELAMRLKKHNVKFVIEPYIRFKGLAGEQATLFFLDPCGNALEFKAFKDMSQLFAK >Mature_140_residues SLQPFHLAIPVYDVPLARQFYREVLELEEGRSCDEWVDFNFYGHQLVIHHHSKTTDQDEKETNPVDGHDVPVPHFGIVLT WEQWEELAMRLKKHNVKFVIEPYIRFKGLAGEQATLFFLDPCGNALEFKAFKDMSQLFAK
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16534; Mature: 16403
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQPFHLAIPVYDVPLARQFYREVLELEEGRSCDEWVDFNFYGHQLVIHHHSKTTDQDE CCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEECCCEECCEEEEEECCCCCCCCC KETNPVDGHDVPVPHFGIVLTWEQWEELAMRLKKHNVKFVIEPYIRFKGLAGEQATLFFL CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCEEEEEE DPCGNALEFKAFKDMSQLFAK CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLQPFHLAIPVYDVPLARQFYREVLELEEGRSCDEWVDFNFYGHQLVIHHHSKTTDQDE CCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEECCCEECCEEEEEECCCCCCCCC KETNPVDGHDVPVPHFGIVLTWEQWEELAMRLKKHNVKFVIEPYIRFKGLAGEQATLFFL CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCEEEEEE DPCGNALEFKAFKDMSQLFAK CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA