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The map label for this gene is pspC [H]

Identifier: 119945332

GI number: 119945332

Start: 1970912

End: 1971322

Strand: Reverse

Name: pspC [H]

Synonym: Ping_1616

Alternate gene names: 119945332

Gene position: 1971322-1970912 (Counterclockwise)

Preceding gene: 119945333

Following gene: 119945331

Centisome position: 43.23

GC content: 33.33

Gene sequence:

>411_bases
ATGAATAAGAAAAGACTCCATCGTGATCCTAAAAATGCCAAGTTAGGAGGTGTATGCGCCGGAATAGCAGAGTATTTTGA
GATTGAAGTATGGTTTGTCCGGTTATTAGTGGTATCAGCCTTTTTATTTACCGCAGGATTTATTGTGTTTCTCATCTATA
TTGTGGCTTATTTTACGCTAGATGAAATGCCGGAAAAGCAACAGTGGCAACAAAATGCCTATAAAAAGCATAAGGTAAAA
AAGAAAGCTTGGCAGACAGGTGATTCTGCACAGCAAATATTAGAAGATATCAGCATTGAATTAGATAAAATGCAGAAAAA
TATTGAGCAGATGGAAGACTATGTAACCTCATTAGAATACAAAATAAATCGTGAATTTAAAAATAAAAATAAAAATAATA
AAACCAAGTAG

Upstream 100 bases:

>100_bases
AAAATTTACAATCCCTTGTGAATCGTACTGAAGAGATGCAGCAGCGGATAGCTTCATTAGAAGAAATTCTTGATAAAGAA
GCACCGCAATGGAGAAATAA

Downstream 100 bases:

>100_bases
TTAACTACCACTCAAGCTTAATGCGCGCGCATAAAAGGATACATCTATTATACTATAAAAGATCCGCTCACCTCGGTGTC
TTTATTTTATAATAATTTGA

Product: phage shock protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNKKRLHRDPKNAKLGGVCAGIAEYFEIEVWFVRLLVVSAFLFTAGFIVFLIYIVAYFTLDEMPEKQQWQQNAYKKHKVK
KKAWQTGDSAQQILEDISIELDKMQKNIEQMEDYVTSLEYKINREFKNKNKNNKTK

Sequences:

>Translated_136_residues
MNKKRLHRDPKNAKLGGVCAGIAEYFEIEVWFVRLLVVSAFLFTAGFIVFLIYIVAYFTLDEMPEKQQWQQNAYKKHKVK
KKAWQTGDSAQQILEDISIELDKMQKNIEQMEDYVTSLEYKINREFKNKNKNNKTK
>Mature_136_residues
MNKKRLHRDPKNAKLGGVCAGIAEYFEIEVWFVRLLVVSAFLFTAGFIVFLIYIVAYFTLDEMPEKQQWQQNAYKKHKVK
KKAWQTGDSAQQILEDISIELDKMQKNIEQMEDYVTSLEYKINREFKNKNKNNKTK

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=124, Percent_Identity=30.6451612903226, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 16115; Mature: 16115

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRLHRDPKNAKLGGVCAGIAEYFEIEVWFVRLLVVSAFLFTAGFIVFLIYIVAYFTL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEMPEKQQWQQNAYKKHKVKKKAWQTGDSAQQILEDISIELDKMQKNIEQMEDYVTSLEY
HCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KINREFKNKNKNNKTK
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKKRLHRDPKNAKLGGVCAGIAEYFEIEVWFVRLLVVSAFLFTAGFIVFLIYIVAYFTL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEMPEKQQWQQNAYKKHKVKKKAWQTGDSAQQILEDISIELDKMQKNIEQMEDYVTSLEY
HCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KINREFKNKNKNNKTK
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]