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The map label for this gene is yeaP [C]

Identifier: 119944952

GI number: 119944952

Start: 1495519

End: 1497378

Strand: Direct

Name: yeaP [C]

Synonym: Ping_1200

Alternate gene names: 119944952

Gene position: 1495519-1497378 (Clockwise)

Preceding gene: 119944951

Following gene: 119944953

Centisome position: 32.8

GC content: 41.29

Gene sequence:

>1860_bases
ATGGTACAAAATAAAAAATCAGCAGTAAGGAAGGTTGATGACTCAAGTCAAATCTATCGGATGCCAGATGGATTACTACC
AGATCCTATCGCTGATTTCATCAAGTTGTCTGCTGCCGAAGGTGATCTCCTGTTCTGGCAATGGGAACCAAATTTAGGGC
GCGTCGACTTCTATACGCCAGAAAAAGCGGCGGAAAAACAAAATTTACGGCGTCTTGGCGAAAATATATCAAACTTGATC
GCTTCTAGGGTTGATAGTTTTACACTTCGCAGTGAAAAATATGAGATTAAAATTTGTGACCCTCAGGGCAATGCGACATG
GAAAAAGATTTCCCTGCGATTTTTCTTGGGAGCGGATGGGGAAATTGAACGGGTGGTTGGTACTGCGCAGGACATCACAG
ATTTGATAGCAATGCAATTGGGGCTTGAAAACCAACTCGATTTTATTAATACCCTTCTGGATAGCTTGAGCAGTCCGGTA
TTTTTCAAGGATGCTGAACTGGTGTATCGCCATTGCAACAAAGCCTTTGAAGAATATTTGGGCAAGCCAAAGAAGGATAT
CCTTGCAAAGACGGTATTTGATTTGTGTCCCCCGCATTTGGCGGAAATTTATCACCGAGCAGATCGGGATCTTCTTGAGC
AGCGCTTACCACAAGTGTATCAAACAAAAGTACATTCAGCCGATGGGATGGAGCACAATGTGATTTTCAACAAATCGATG
GTGTTCAACAAAAAGGGCGAGATAACTGGAATGATTGGTATCATCAATGACATTGATGATCGCGTCCAGATGGAAAATAG
ACTGCAAAGGATAATGGACATTAAAGACGCGATCATGGAGATAAACCGTGCAATCACTGATGCGAACACATCGGAACAGT
TTTATGCGATTGTCCTTGACTGTATTCTTTCGGCCATGCAATCGGCTGAAACCTGCGGTTTCCTGATGCTTGATTCTGTA
GGCAACTTAAAAATGGTGGCTGCCAGTGGATTATACAACGCATGGAAAAAACCAGTGCAGGTGGAATTGGAAAAATCCAT
GGCCTGGAATGCGATGGCAGAAAATAAAAAAAGCTGTTTTTATATCGATGATATCCACAAATTTTCCAGGCAAAAAAGCA
TTGAATCGCATGCTTTATTGCAGCAACTGAAAATACGTTCCCTGCTCGGTGCTCCTATTCTTAACGAAGGAAAATTGATC
GGATTCATTACTGTCGGCAGCCGCAATATTGACGCCTATGACGAAACTGACCTGTTTATTATGGAGTATGTGCGCAGTCA
AATAATCCAGGTTCTTAATCGACAATTTTTATATGATAAGAATGTTACTCTGGCGCGATATGATAGTTTGACGGGGTTGC
TCAACCGCAGATATTTTGAAGAATTATTTGAAAGACATCAGAATCGCGCAAAGCGTTATGATGAAAAATTTCATTTGGTC
GTAATAGACCTTGATAATTTTAAAGAGATTAATGACCAATGTGGCCATCTTTGTGGGGATGCGGTACTTGTAGATTTCGC
CAAAAAATTGACCGCCTTATTTCGTGAATCTGATATTATTTGCCGCTTTGGCGGTGATGAATTCCTCCTTGTATTAATAG
ATATAAATATCAGCAAACTGGTGCAGAAGATTGAATTAATAAAAACAAAACTTCAAACTATCCCCTTTATTTACAATGAA
AACAGTCTGCCTTATAGTTTCAGTTATGGAATAGCGGAATGGCCTGCGGACGGTGCCAATCTGGATCTCCTGACTTGCCG
TGCGGATAATGAGATGTACAAGAACAAGCGCGCGTCAAAAAAACAGCCGAATAAGATGCACCACGCCAGTCAAAAAACAG
AATCTGCGGCATTTATTTGA

Upstream 100 bases:

>100_bases
TAAATTTTTTGGTGCATTTCTAACCCCTAAATTAGATTTTACTCAGCTCCACAGATCAAAAAATGACTGTTCCTAACTGT
TTGCTTGGAGAATTTTAAAA

Downstream 100 bases:

>100_bases
GGTTTGGTGGTCATTAATAAGTGCTAAGAGAAAATTTTCCAGGGTCTTTAAAGCAGATCCTTTTTATGCAGATACCCAGG
TGGTATTTTCCACGAAATAA

Product: diguanylate cyclase with PAS/PAC sensor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MVQNKKSAVRKVDDSSQIYRMPDGLLPDPIADFIKLSAAEGDLLFWQWEPNLGRVDFYTPEKAAEKQNLRRLGENISNLI
ASRVDSFTLRSEKYEIKICDPQGNATWKKISLRFFLGADGEIERVVGTAQDITDLIAMQLGLENQLDFINTLLDSLSSPV
FFKDAELVYRHCNKAFEEYLGKPKKDILAKTVFDLCPPHLAEIYHRADRDLLEQRLPQVYQTKVHSADGMEHNVIFNKSM
VFNKKGEITGMIGIINDIDDRVQMENRLQRIMDIKDAIMEINRAITDANTSEQFYAIVLDCILSAMQSAETCGFLMLDSV
GNLKMVAASGLYNAWKKPVQVELEKSMAWNAMAENKKSCFYIDDIHKFSRQKSIESHALLQQLKIRSLLGAPILNEGKLI
GFITVGSRNIDAYDETDLFIMEYVRSQIIQVLNRQFLYDKNVTLARYDSLTGLLNRRYFEELFERHQNRAKRYDEKFHLV
VIDLDNFKEINDQCGHLCGDAVLVDFAKKLTALFRESDIICRFGGDEFLLVLIDINISKLVQKIELIKTKLQTIPFIYNE
NSLPYSFSYGIAEWPADGANLDLLTCRADNEMYKNKRASKKQPNKMHHASQKTESAAFI

Sequences:

>Translated_619_residues
MVQNKKSAVRKVDDSSQIYRMPDGLLPDPIADFIKLSAAEGDLLFWQWEPNLGRVDFYTPEKAAEKQNLRRLGENISNLI
ASRVDSFTLRSEKYEIKICDPQGNATWKKISLRFFLGADGEIERVVGTAQDITDLIAMQLGLENQLDFINTLLDSLSSPV
FFKDAELVYRHCNKAFEEYLGKPKKDILAKTVFDLCPPHLAEIYHRADRDLLEQRLPQVYQTKVHSADGMEHNVIFNKSM
VFNKKGEITGMIGIINDIDDRVQMENRLQRIMDIKDAIMEINRAITDANTSEQFYAIVLDCILSAMQSAETCGFLMLDSV
GNLKMVAASGLYNAWKKPVQVELEKSMAWNAMAENKKSCFYIDDIHKFSRQKSIESHALLQQLKIRSLLGAPILNEGKLI
GFITVGSRNIDAYDETDLFIMEYVRSQIIQVLNRQFLYDKNVTLARYDSLTGLLNRRYFEELFERHQNRAKRYDEKFHLV
VIDLDNFKEINDQCGHLCGDAVLVDFAKKLTALFRESDIICRFGGDEFLLVLIDINISKLVQKIELIKTKLQTIPFIYNE
NSLPYSFSYGIAEWPADGANLDLLTCRADNEMYKNKRASKKQPNKMHHASQKTESAAFI
>Mature_619_residues
MVQNKKSAVRKVDDSSQIYRMPDGLLPDPIADFIKLSAAEGDLLFWQWEPNLGRVDFYTPEKAAEKQNLRRLGENISNLI
ASRVDSFTLRSEKYEIKICDPQGNATWKKISLRFFLGADGEIERVVGTAQDITDLIAMQLGLENQLDFINTLLDSLSSPV
FFKDAELVYRHCNKAFEEYLGKPKKDILAKTVFDLCPPHLAEIYHRADRDLLEQRLPQVYQTKVHSADGMEHNVIFNKSM
VFNKKGEITGMIGIINDIDDRVQMENRLQRIMDIKDAIMEINRAITDANTSEQFYAIVLDCILSAMQSAETCGFLMLDSV
GNLKMVAASGLYNAWKKPVQVELEKSMAWNAMAENKKSCFYIDDIHKFSRQKSIESHALLQQLKIRSLLGAPILNEGKLI
GFITVGSRNIDAYDETDLFIMEYVRSQIIQVLNRQFLYDKNVTLARYDSLTGLLNRRYFEELFERHQNRAKRYDEKFHLV
VIDLDNFKEINDQCGHLCGDAVLVDFAKKLTALFRESDIICRFGGDEFLLVLIDINISKLVQKIELIKTKLQTIPFIYNE
NSLPYSFSYGIAEWPADGANLDLLTCRADNEMYKNKRASKKQPNKMHHASQKTESAAFI

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI87081977, Length=241, Percent_Identity=30.7053941908714, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1787541, Length=159, Percent_Identity=35.2201257861635, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1786584, Length=155, Percent_Identity=29.6774193548387, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI145693134, Length=178, Percent_Identity=31.4606741573034, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87081881, Length=153, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788381, Length=104, Percent_Identity=40.3846153846154, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788956, Length=170, Percent_Identity=35.8823529411765, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787802, Length=177, Percent_Identity=26.5536723163842, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787816, Length=156, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI87082007, Length=207, Percent_Identity=29.4685990338164, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081974, Length=158, Percent_Identity=29.1139240506329, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788085, Length=206, Percent_Identity=29.126213592233, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787262, Length=161, Percent_Identity=26.0869565217391, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330
- InterPro:   IPR000014
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 70965; Mature: 70965

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQNKKSAVRKVDDSSQIYRMPDGLLPDPIADFIKLSAAEGDLLFWQWEPNLGRVDFYTP
CCCCHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEECCCC
EKAAEKQNLRRLGENISNLIASRVDSFTLRSEKYEIKICDPQGNATWKKISLRFFLGADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCEEEEEEEEEECCCC
EIERVVGTAQDITDLIAMQLGLENQLDFINTLLDSLSSPVFFKDAELVYRHCNKAFEEYL
CHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHH
GKPKKDILAKTVFDLCPPHLAEIYHRADRDLLEQRLPQVYQTKVHSADGMEHNVIFNKSM
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCE
VFNKKGEITGMIGIINDIDDRVQMENRLQRIMDIKDAIMEINRAITDANTSEQFYAIVLD
EECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
CILSAMQSAETCGFLMLDSVGNLKMVAASGLYNAWKKPVQVELEKSMAWNAMAENKKSCF
HHHHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCEE
YIDDIHKFSRQKSIESHALLQQLKIRSLLGAPILNEGKLIGFITVGSRNIDAYDETDLFI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
MEYVRSQIIQVLNRQFLYDKNVTLARYDSLTGLLNRRYFEELFERHQNRAKRYDEKFHLV
HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VIDLDNFKEINDQCGHLCGDAVLVDFAKKLTALFRESDIICRFGGDEFLLVLIDINISKL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCHHHH
VQKIELIKTKLQTIPFIYNENSLPYSFSYGIAEWPADGANLDLLTCRADNEMYKNKRASK
HHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHCCCC
KQPNKMHHASQKTESAAFI
CCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVQNKKSAVRKVDDSSQIYRMPDGLLPDPIADFIKLSAAEGDLLFWQWEPNLGRVDFYTP
CCCCHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEECCCC
EKAAEKQNLRRLGENISNLIASRVDSFTLRSEKYEIKICDPQGNATWKKISLRFFLGADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCEEEEEEEEEECCCC
EIERVVGTAQDITDLIAMQLGLENQLDFINTLLDSLSSPVFFKDAELVYRHCNKAFEEYL
CHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHH
GKPKKDILAKTVFDLCPPHLAEIYHRADRDLLEQRLPQVYQTKVHSADGMEHNVIFNKSM
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCE
VFNKKGEITGMIGIINDIDDRVQMENRLQRIMDIKDAIMEINRAITDANTSEQFYAIVLD
EECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
CILSAMQSAETCGFLMLDSVGNLKMVAASGLYNAWKKPVQVELEKSMAWNAMAENKKSCF
HHHHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCEE
YIDDIHKFSRQKSIESHALLQQLKIRSLLGAPILNEGKLIGFITVGSRNIDAYDETDLFI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
MEYVRSQIIQVLNRQFLYDKNVTLARYDSLTGLLNRRYFEELFERHQNRAKRYDEKFHLV
HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VIDLDNFKEINDQCGHLCGDAVLVDFAKKLTALFRESDIICRFGGDEFLLVLIDINISKL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCHHHH
VQKIELIKTKLQTIPFIYNENSLPYSFSYGIAEWPADGANLDLLTCRADNEMYKNKRASK
HHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHCCCC
KQPNKMHHASQKTESAAFI
CCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]