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The map label for this gene is rsmI [H]

Identifier: 119944933

GI number: 119944933

Start: 1468454

End: 1469314

Strand: Direct

Name: rsmI [H]

Synonym: Ping_1178

Alternate gene names: 119944933

Gene position: 1468454-1469314 (Clockwise)

Preceding gene: 119944928

Following gene: 119944934

Centisome position: 32.21

GC content: 42.16

Gene sequence:

>861_bases
ATGTCTGAAAAGAGCCAAATTTCATCTCAACTACCTGCCAAACTCTATATAGTGGCTACCCCCATTGGAAATATCAGTGA
TATTACCTACCGGGCAATAGAAATATTACAACAAGTCGATTTGATTGCAGCTGAAGATACACGTCATAGTGGAAAATTAT
TAAGCCATTATCATATCAAAAAACCCATGTTTCCGTTACATGATCATAACGAGCGTCAACGCGGGCAAGTCCTGATAGAA
AAAATTAAAGCCGGGCAGTCAATCGCATTAATATCCGATGCGGGGACGCCATTAATAAGTGATCCGGGTTACCACCTCGT
TAATGAATGCCGCGCAGCAGGTGTTGATATTGTGCCGATTCCTGGTGCCTGTGCGGCAATAGCGGCATTAAGCGCGGCGG
GAATGCCATCGGACAGATTTTCTTTTGAAGGTTTTTTACCTGCCAAGGGAAAAAGTAAACAAGATAAATTAAAAGCCTTA
ATTGAAGAATCCCGCACTATGATTTTTTATGAGTCACCACGTCGCGTTCAAGATACTGTTGAGCAGATTATCAGTATATT
TGGTGGTGACCGTAAACTGGTTATTGCGCGCGAGTTAACTAAAATCTTTGAATCCTTTTATGCACTGACTGCCGAGGAGA
TGTTAGTTTGGTTAAAAGAGGATACCAACCATTGCCGTGGTGAATTTGTTTTAATGGTGGCGGGCGCTCAAAAAGATGAT
GATGCCATTCCACAGGTTGCGCTGAACACCCTGACTTTATTAAAGGAGCAGCTGCCGCTTAAAAAAGCCGCCGCTTTAAC
GGCGCAAATTCACGATCAGAAAAAAAATGAGCTCTATAAATGGGGATTAGAAAACTTATAA

Upstream 100 bases:

>100_bases
CTTTTTAGCTCGCAAGTATTCGATGTAGGTATCAAGATGGCTATAGTGTAATATTGCCGCATCAGTTAAACAATCTTATT
CACTTTATCAAGGCGATTAT

Downstream 100 bases:

>100_bases
CCCAGTAACAAAGACTTTCCTTGTCATTCGCGTCCATTATCCCGTATAATCCGCCGCGGAGTTGGCCAGATCGTCGCCGC
TTTTATTGCTTGCAATAAGA

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSEKSQISSQLPAKLYIVATPIGNISDITYRAIEILQQVDLIAAEDTRHSGKLLSHYHIKKPMFPLHDHNERQRGQVLIE
KIKAGQSIALISDAGTPLISDPGYHLVNECRAAGVDIVPIPGACAAIAALSAAGMPSDRFSFEGFLPAKGKSKQDKLKAL
IEESRTMIFYESPRRVQDTVEQIISIFGGDRKLVIARELTKIFESFYALTAEEMLVWLKEDTNHCRGEFVLMVAGAQKDD
DAIPQVALNTLTLLKEQLPLKKAAALTAQIHDQKKNELYKWGLENL

Sequences:

>Translated_286_residues
MSEKSQISSQLPAKLYIVATPIGNISDITYRAIEILQQVDLIAAEDTRHSGKLLSHYHIKKPMFPLHDHNERQRGQVLIE
KIKAGQSIALISDAGTPLISDPGYHLVNECRAAGVDIVPIPGACAAIAALSAAGMPSDRFSFEGFLPAKGKSKQDKLKAL
IEESRTMIFYESPRRVQDTVEQIISIFGGDRKLVIARELTKIFESFYALTAEEMLVWLKEDTNHCRGEFVLMVAGAQKDD
DAIPQVALNTLTLLKEQLPLKKAAALTAQIHDQKKNELYKWGLENL
>Mature_285_residues
SEKSQISSQLPAKLYIVATPIGNISDITYRAIEILQQVDLIAAEDTRHSGKLLSHYHIKKPMFPLHDHNERQRGQVLIEK
IKAGQSIALISDAGTPLISDPGYHLVNECRAAGVDIVPIPGACAAIAALSAAGMPSDRFSFEGFLPAKGKSKQDKLKALI
EESRTMIFYESPRRVQDTVEQIISIFGGDRKLVIARELTKIFESFYALTAEEMLVWLKEDTNHCRGEFVLMVAGAQKDDD
AIPQVALNTLTLLKEQLPLKKAAALTAQIHDQKKNELYKWGLENL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=272, Percent_Identity=58.8235294117647, Blast_Score=327, Evalue=5e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31717; Mature: 31586

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKSQISSQLPAKLYIVATPIGNISDITYRAIEILQQVDLIAAEDTRHSGKLLSHYHIK
CCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
KPMFPLHDHNERQRGQVLIEKIKAGQSIALISDAGTPLISDPGYHLVNECRAAGVDIVPI
CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEC
PGACAAIAALSAAGMPSDRFSFEGFLPAKGKSKQDKLKALIEESRTMIFYESPRRVQDTV
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHH
EQIISIFGGDRKLVIARELTKIFESFYALTAEEMLVWLKEDTNHCRGEFVLMVAGAQKDD
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
DAIPQVALNTLTLLKEQLPLKKAAALTAQIHDQKKNELYKWGLENL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEKSQISSQLPAKLYIVATPIGNISDITYRAIEILQQVDLIAAEDTRHSGKLLSHYHIK
CCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
KPMFPLHDHNERQRGQVLIEKIKAGQSIALISDAGTPLISDPGYHLVNECRAAGVDIVPI
CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEC
PGACAAIAALSAAGMPSDRFSFEGFLPAKGKSKQDKLKALIEESRTMIFYESPRRVQDTV
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHH
EQIISIFGGDRKLVIARELTKIFESFYALTAEEMLVWLKEDTNHCRGEFVLMVAGAQKDD
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
DAIPQVALNTLTLLKEQLPLKKAAALTAQIHDQKKNELYKWGLENL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]