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The map label for this gene is yacF [C]

Identifier: 119944916

GI number: 119944916

Start: 1450847

End: 1451578

Strand: Direct

Name: yacF [C]

Synonym: Ping_1160

Alternate gene names: 119944916

Gene position: 1450847-1451578 (Clockwise)

Preceding gene: 119944915

Following gene: 119944917

Centisome position: 31.82

GC content: 35.52

Gene sequence:

>732_bases
ATGGTCGCTTTTGAATACCCTCTGAATGAGAAAAATCGTAGTTATTTACGTTTTGAATTTCTCTTCGCTCAGCTTAAAAT
GAGTATCTCTTTTGAGCATGTAAATGACTCAACTATTTTTTTTAAAGCCTTATTGGAATTGCTTGAATTAGCTGAACGTA
GCGACATTCGTCATGAGTTAGTCAAAGATTTGCGTTTGTTATCTGAGCAGATGAAAAATTGGTTAAACCATGATGGAGTG
GATCATAAAAAAGAGACTGATTTAATCTCAGAAATTGAGGGACTCATTCAAGATGTACTGCGCCTGTCAAAAAAACTGCG
GTTTTTTAAAGACAACCGTTTTTTAACTTCTTTAAAACAGCGTTTTTTTATTCCCGGTGGTACCTGTAATTTTGATTTGC
CACAGTTTCACTTTTGGTTAGCCAGTGACCTGGAAAAACGCCAGAATGATGCACAATCCTGGTTTAGCCATTTTGCCAGT
TTAGAAAAAGCATTAACATTTTTTCTAACAATAAAGCGTTCTCAAGCTATCAATACAAAACAGATTGCTAAAAATGGTTT
TTATCAGGCAGAAGTTGAAAAGTGTGGTTTTATTGTTGTCAAAGTGGATAAAAACCAAGCCGTGTATCCTGTTATAAGCG
GTCACAAACAGCGTTATTCAATCCGATTTATGAGCGCCGAAAGTGAAAAAAATACGTCAGACAGTATTGAGTTTCAGCAA
ATTTGTTGCTAG

Upstream 100 bases:

>100_bases
TTTCGTAAGTTGAAAAACTAATCAAATAACTGATATTTGTTTCCTGTTTGCCCACTTTTACTGTATTGTTACCATTTTTA
GTCGAGATATCTAGATAAAA

Downstream 100 bases:

>100_bases
AAGTTTTATATTGCTAGGAGTTTTGTATGATAGTTAACTGCCCAACCTGTAAAAAACAAGTCGAATGGATAATTGAAAAC
AGTCACCGTCCATTTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MVAFEYPLNEKNRSYLRFEFLFAQLKMSISFEHVNDSTIFFKALLELLELAERSDIRHELVKDLRLLSEQMKNWLNHDGV
DHKKETDLISEIEGLIQDVLRLSKKLRFFKDNRFLTSLKQRFFIPGGTCNFDLPQFHFWLASDLEKRQNDAQSWFSHFAS
LEKALTFFLTIKRSQAINTKQIAKNGFYQAEVEKCGFIVVKVDKNQAVYPVISGHKQRYSIRFMSAESEKNTSDSIEFQQ
ICC

Sequences:

>Translated_243_residues
MVAFEYPLNEKNRSYLRFEFLFAQLKMSISFEHVNDSTIFFKALLELLELAERSDIRHELVKDLRLLSEQMKNWLNHDGV
DHKKETDLISEIEGLIQDVLRLSKKLRFFKDNRFLTSLKQRFFIPGGTCNFDLPQFHFWLASDLEKRQNDAQSWFSHFAS
LEKALTFFLTIKRSQAINTKQIAKNGFYQAEVEKCGFIVVKVDKNQAVYPVISGHKQRYSIRFMSAESEKNTSDSIEFQQ
ICC
>Mature_243_residues
MVAFEYPLNEKNRSYLRFEFLFAQLKMSISFEHVNDSTIFFKALLELLELAERSDIRHELVKDLRLLSEQMKNWLNHDGV
DHKKETDLISEIEGLIQDVLRLSKKLRFFKDNRFLTSLKQRFFIPGGTCNFDLPQFHFWLASDLEKRQNDAQSWFSHFAS
LEKALTFFLTIKRSQAINTKQIAKNGFYQAEVEKCGFIVVKVDKNQAVYPVISGHKQRYSIRFMSAESEKNTSDSIEFQQ
ICC

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=243, Percent_Identity=33.7448559670782, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023144
- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28615; Mature: 28615

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAFEYPLNEKNRSYLRFEFLFAQLKMSISFEHVNDSTIFFKALLELLELAERSDIRHEL
CEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VKDLRLLSEQMKNWLNHDGVDHKKETDLISEIEGLIQDVLRLSKKLRFFKDNRFLTSLKQ
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RFFIPGGTCNFDLPQFHFWLASDLEKRQNDAQSWFSHFASLEKALTFFLTIKRSQAINTK
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QIAKNGFYQAEVEKCGFIVVKVDKNQAVYPVISGHKQRYSIRFMSAESEKNTSDSIEFQQ
HHHHCCCCEEEHHHCCEEEEEECCCCEEEHHHCCCCCEEEEEEEECCCCCCCCCCCHHHH
ICC
HCC
>Mature Secondary Structure
MVAFEYPLNEKNRSYLRFEFLFAQLKMSISFEHVNDSTIFFKALLELLELAERSDIRHEL
CEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VKDLRLLSEQMKNWLNHDGVDHKKETDLISEIEGLIQDVLRLSKKLRFFKDNRFLTSLKQ
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RFFIPGGTCNFDLPQFHFWLASDLEKRQNDAQSWFSHFASLEKALTFFLTIKRSQAINTK
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QIAKNGFYQAEVEKCGFIVVKVDKNQAVYPVISGHKQRYSIRFMSAESEKNTSDSIEFQQ
HHHHCCCCEEEHHHCCEEEEEECCCCEEEHHHCCCCCEEEEEEEECCCCCCCCCCCHHHH
ICC
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA