| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is secA
Identifier: 119944911
GI number: 119944911
Start: 1444874
End: 1447594
Strand: Direct
Name: secA
Synonym: Ping_1155
Alternate gene names: 119944911
Gene position: 1444874-1447594 (Clockwise)
Preceding gene: 119944909
Following gene: 119944912
Centisome position: 31.69
GC content: 40.5
Gene sequence:
>2721_bases ATGATTACAGGGCTAATAACAAAAATAATAGGCAGTCGTAATGACCGTTATTTGAAGAAGCTACGTAAAGTAGCAGATGA AATTAATAAGTTAGAACCACAAATGAAAGCGCTGTCGGATGAGGAATTAAAAGCTAAAACGATCGAGTTTAAAGAACGTC TCGCATCGGGTGAAAGCTTAGATAAAATTCTTGTTGAAGCCTTTGCTGTGGTACGTAATGCATCCGAGCGTGTCTTTGGT ATGCGTCAGTTTGATGTGCAATTAATTGGCGGTATGGTCTTAAATGACAATAAAATTGCTGAAATGCGTACTGGTGAAGG TAAAACATTAACGGCTACATTGCCAGCTTATCTTAATGCACTAAGCGGTAAAGGTGTGCATATTATAACGGTAAATGACT ATCTTGCAGGTCGTGATGCTAAGTGGAATGCTAAACTTTTTGAATTTTTAGGGCTCACCGTTGGTATTAATATATCGGGT ATGTCCGGGGATCAAAAACGAGCTGCTTATGCCGCTGATATCACTTATGGCACTAATAATGAATTTGGTTTTGATTACCT GCGCGATAATATGGCGTTTGAAGCGCAGCAGCGTGTTATGCGCTCGTTACATTATGCCATTATCGATGAAGTTGACTCAA TCTTAATCGATGAAGCGAGAACGCCGCTTATTATATCAGGCCCGACTGATGGTGATGCTACTTTATATACTGAGTTGAAT ACTGTTATCCCAATGTTAACTCAACAGGACAAAGAAGATACTGAAGAATATATCGGGGAAGGGGATTTTACTGTTGATGA AAAAAATAAGCAGGTTTTACTCACTGAACGTGGCCAAGAAAAAGTAGAGGTTATCTTACAAGAGCGTGGTTTACTTGATG AAAATCAATCACTCTATTCAGCCGCCAGTATTAGTTTATTACACCATGTCAATGCAGCATTGCGTGCGCATACCCTGTTT GAAAAAGATGTTGAATATATAGTCACAGAAAAAGGCGAAGTCGTTATTGTTGATGAACACTCTGGACGGACAATGCCCGG ACGGCGCTGGTCTGAAGGTTTACACCAGGCGGTAGAAGCTAAAGAAGGTGTACAAATTCAAAATGAGAACCAAACATTAG CATCGATCACTTTCCAAAACTATTTCCGTCTCTATGAAAAATTGGCCGGCATGACCGGTACTGCTGATACTGAGGCATTT GAATTTCAGTCTATTTATGGTTTAGAAACCATTGTGATTCCAACCAATCAAGCGATGATCCGTAAAGATGGCGGAGACTT GGTTTATTTAACTGAACAGGAAAAATATCAAGCTATTGTCGATGATATTAAACCGCGTCTGGAGAAAGGACAACCAATCT TGGTTGGAACGGTATCTATTGAACACTCTGAGTTATTATCCGATTTAATGGATAAGGCAAAAATAAAACACAGTGTTTTA AACGCTAAATTTCATGCCAAAGAAGCAGATATTATTGCTCAAGCGGGTGCATTAGGCAGTGTCACCATTGCAACAAATAT GGCGGGCCGTGGTACCGATATTGTTCTGGGTGGTAATCTGGAAGCTCGTTTGGATAAGTTAGGCGATGTGAGCCCCAAGG AAATAGAAGCAGAAAAAGAGCTTTGGAAAGAAGAGCATAAAAAAGTATTAAAGGCGGGTGGCTTATATATTGTCGGTACT GAACGGCACGAATCTCGTCGTATTGATAACCAACTACGTGGCCGCTCTGGGCGACAAGGTGATCCTGGTGAAAGCCGTTT CTATTTATCAATGGAAGACTCTCTGATGCGTATCTTTGCTTCAGAGAAAGTATCTAATATGATGAAAAAATTGGGCATGG AAAAAGGGGAGGCAATTGAGCACCCTTGGGTCTCACGTGCTATTGAGAATGCACAACGTAAAGTTGAAGGTCGAAACTTC GATATGCGTAAATCTCTTCTCGATTTTGATGATGTGTCTAATGAACAACGTAAAGTGATTTATCAGCAGCGTAACGGTGT GATTGACAGTGAAGAGATCACAGAAACAATTGAGCAAATCTGGGATGATGTATTTCATAATTGTGTTAATGAATATGTTC CTCCCCATTCACTCACTGAACAATGGGATCTTGAAGGGTTAGAGCAGCGGTTAAAAGCTGATTTTTTAGTCGATTTACCT GTTCGACAATGGTCAATTGATGATGCAAACCTGCAAGAAGGAAGCATTCGTGAAAAAGTGGTTGAGCATGCAAAAGCTTC ATATCTCGCGAAAAAAGAACAGGTTGGTCCAGCAATTATTGGTAGTTTCGAAAAATCTGTCATGCTGCAAACTATTGATA CTTTGTGGAAAGAGCACCTTGCTGCAATGGATCATCTACGCCAGGGTATTCATTTACGTGGTTATGCACAAAAAGATCCT AAACAAGAGTACAAACGCGAGTCATTTGAATTGTTTTTACAAATGTTGGAAAACTTAAAACGTGAAGTTGTGGTTATCCT TTCAAAAGTGCAAGTGCAGTCAAAGGAAGAAGCTGACGTAATTCAAGAACAACGTCGTCAGGCTGAAGCTAAGGCTCAGC TGGAAATGAAGCATGCACAGGTAAATAAGGGGGAAGTGGTTAGCGATGAAAATACGGGCGATGACACTTTTGTACGCAAC GAAAAAAAAGTGGGGCGCAATGAACCCTGCCCATGCGGCTCTGGCAAAAAATACAAACAGTGTCATGGTAAACTTGATTA G
Upstream 100 bases:
>100_bases AACGCGTAGTTTTAAAGAAGTGTTAACAGTTTTCAAACGTATCGTTGGTGCAAAACGCGTTTACATCAAAATTTTAATTT TTATAGAATGAGAAAGTGAA
Downstream 100 bases:
>100_bases TTTTTTTAAAATTTGATGGCTAGAAAAAGGCTCTTTTAACAAGAGCCTTTTTTATGCTTTTAAAAGGACTTTTATGAAAA ATATTGATATCAGTATTGCG
Product: preprotein translocase, SecA subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 906; Mature: 906
Protein sequence:
>906_residues MITGLITKIIGSRNDRYLKKLRKVADEINKLEPQMKALSDEELKAKTIEFKERLASGESLDKILVEAFAVVRNASERVFG MRQFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLPAYLNALSGKGVHIITVNDYLAGRDAKWNAKLFEFLGLTVGINISG MSGDQKRAAYAADITYGTNNEFGFDYLRDNMAFEAQQRVMRSLHYAIIDEVDSILIDEARTPLIISGPTDGDATLYTELN TVIPMLTQQDKEDTEEYIGEGDFTVDEKNKQVLLTERGQEKVEVILQERGLLDENQSLYSAASISLLHHVNAALRAHTLF EKDVEYIVTEKGEVVIVDEHSGRTMPGRRWSEGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAF EFQSIYGLETIVIPTNQAMIRKDGGDLVYLTEQEKYQAIVDDIKPRLEKGQPILVGTVSIEHSELLSDLMDKAKIKHSVL NAKFHAKEADIIAQAGALGSVTIATNMAGRGTDIVLGGNLEARLDKLGDVSPKEIEAEKELWKEEHKKVLKAGGLYIVGT ERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDSLMRIFASEKVSNMMKKLGMEKGEAIEHPWVSRAIENAQRKVEGRNF DMRKSLLDFDDVSNEQRKVIYQQRNGVIDSEEITETIEQIWDDVFHNCVNEYVPPHSLTEQWDLEGLEQRLKADFLVDLP VRQWSIDDANLQEGSIREKVVEHAKASYLAKKEQVGPAIIGSFEKSVMLQTIDTLWKEHLAAMDHLRQGIHLRGYAQKDP KQEYKRESFELFLQMLENLKREVVVILSKVQVQSKEEADVIQEQRRQAEAKAQLEMKHAQVNKGEVVSDENTGDDTFVRN EKKVGRNEPCPCGSGKKYKQCHGKLD
Sequences:
>Translated_906_residues MITGLITKIIGSRNDRYLKKLRKVADEINKLEPQMKALSDEELKAKTIEFKERLASGESLDKILVEAFAVVRNASERVFG MRQFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLPAYLNALSGKGVHIITVNDYLAGRDAKWNAKLFEFLGLTVGINISG MSGDQKRAAYAADITYGTNNEFGFDYLRDNMAFEAQQRVMRSLHYAIIDEVDSILIDEARTPLIISGPTDGDATLYTELN TVIPMLTQQDKEDTEEYIGEGDFTVDEKNKQVLLTERGQEKVEVILQERGLLDENQSLYSAASISLLHHVNAALRAHTLF EKDVEYIVTEKGEVVIVDEHSGRTMPGRRWSEGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAF EFQSIYGLETIVIPTNQAMIRKDGGDLVYLTEQEKYQAIVDDIKPRLEKGQPILVGTVSIEHSELLSDLMDKAKIKHSVL NAKFHAKEADIIAQAGALGSVTIATNMAGRGTDIVLGGNLEARLDKLGDVSPKEIEAEKELWKEEHKKVLKAGGLYIVGT ERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDSLMRIFASEKVSNMMKKLGMEKGEAIEHPWVSRAIENAQRKVEGRNF DMRKSLLDFDDVSNEQRKVIYQQRNGVIDSEEITETIEQIWDDVFHNCVNEYVPPHSLTEQWDLEGLEQRLKADFLVDLP VRQWSIDDANLQEGSIREKVVEHAKASYLAKKEQVGPAIIGSFEKSVMLQTIDTLWKEHLAAMDHLRQGIHLRGYAQKDP KQEYKRESFELFLQMLENLKREVVVILSKVQVQSKEEADVIQEQRRQAEAKAQLEMKHAQVNKGEVVSDENTGDDTFVRN EKKVGRNEPCPCGSGKKYKQCHGKLD >Mature_906_residues MITGLITKIIGSRNDRYLKKLRKVADEINKLEPQMKALSDEELKAKTIEFKERLASGESLDKILVEAFAVVRNASERVFG MRQFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLPAYLNALSGKGVHIITVNDYLAGRDAKWNAKLFEFLGLTVGINISG MSGDQKRAAYAADITYGTNNEFGFDYLRDNMAFEAQQRVMRSLHYAIIDEVDSILIDEARTPLIISGPTDGDATLYTELN TVIPMLTQQDKEDTEEYIGEGDFTVDEKNKQVLLTERGQEKVEVILQERGLLDENQSLYSAASISLLHHVNAALRAHTLF EKDVEYIVTEKGEVVIVDEHSGRTMPGRRWSEGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAF EFQSIYGLETIVIPTNQAMIRKDGGDLVYLTEQEKYQAIVDDIKPRLEKGQPILVGTVSIEHSELLSDLMDKAKIKHSVL NAKFHAKEADIIAQAGALGSVTIATNMAGRGTDIVLGGNLEARLDKLGDVSPKEIEAEKELWKEEHKKVLKAGGLYIVGT ERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDSLMRIFASEKVSNMMKKLGMEKGEAIEHPWVSRAIENAQRKVEGRNF DMRKSLLDFDDVSNEQRKVIYQQRNGVIDSEEITETIEQIWDDVFHNCVNEYVPPHSLTEQWDLEGLEQRLKADFLVDLP VRQWSIDDANLQEGSIREKVVEHAKASYLAKKEQVGPAIIGSFEKSVMLQTIDTLWKEHLAAMDHLRQGIHLRGYAQKDP KQEYKRESFELFLQMLENLKREVVVILSKVQVQSKEEADVIQEQRRQAEAKAQLEMKHAQVNKGEVVSDENTGDDTFVRN EKKVGRNEPCPCGSGKKYKQCHGKLD
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family
Homologues:
Organism=Escherichia coli, GI1786287, Length=908, Percent_Identity=65.5286343612335, Blast_Score=1233, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECA_PSYIN (A1SU27)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942591.1 - ProteinModelPortal: A1SU27 - SMR: A1SU27 - STRING: A1SU27 - GeneID: 4624544 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_1155 - eggNOG: COG0653 - HOGENOM: HBG284200 - OMA: GGMVLHD - PhylomeDB: A1SU27 - BioCyc: PING357804:PING_1155-MONOMER - GO: GO:0005737 - HAMAP: MF_01382 - InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 - Gene3D: G3DSA:1.10.3060.10 - PRINTS: PR00906 - SMART: SM00957 - SMART: SM00958 - TIGRFAMs: TIGR00963
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW
EC number: NA
Molecular weight: Translated: 102285; Mature: 102285
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGLITKIIGSRNDRYLKKLRKVADEINKLEPQMKALSDEELKAKTIEFKERLASGESL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCHH DKILVEAFAVVRNASERVFGMRQFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCEEEEEHHHHHHH LSGKGVHIITVNDYLAGRDAKWNAKLFEFLGLTVGINISGMSGDQKRAAYAADITYGTNN HCCCCEEEEEECHHHCCCCCCCCHHHHHHHCCEEEEEEECCCCCCHHHEEEEEEEECCCC EFGFDYLRDNMAFEAQQRVMRSLHYAIIDEVDSILIDEARTPLIISGPTDGDATLYTELN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHH TVIPMLTQQDKEDTEEYIGEGDFTVDEKNKQVLLTERGQEKVEVILQERGLLDENQSLYS HHHHHHHCCCHHHHHHHCCCCCCEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHH AASISLLHHVNAALRAHTLFEKDVEYIVTEKGEVVIVDEHSGRTMPGRRWSEGLHQAVEA HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHH KEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQSIYGLETIVIPTNQAMI HCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEE RKDGGDLVYLTEQEKYQAIVDDIKPRLEKGQPILVGTVSIEHSELLSDLMDKAKIKHSVL EECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH NAKFHAKEADIIAQAGALGSVTIATNMAGRGTDIVLGGNLEARLDKLGDVSPKEIEAEKE CCHHCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHH LWKEEHKKVLKAGGLYIVGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDSLMRIFA HHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH SEKVSNMMKKLGMEKGEAIEHPWVSRAIENAQRKVEGRNFDMRKSLLDFDDVSNEQRKVI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCHHHHHH YQQRNGVIDSEEITETIEQIWDDVFHNCVNEYVPPHSLTEQWDLEGLEQRLKADFLVDLP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEECC VRQWSIDDANLQEGSIREKVVEHAKASYLAKKEQVGPAIIGSFEKSVMLQTIDTLWKEHL CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AAMDHLRQGIHLRGYAQKDPKQEYKRESFELFLQMLENLKREVVVILSKVQVQSKEEADV HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IQEQRRQAEAKAQLEMKHAQVNKGEVVSDENTGDDTFVRNEKKVGRNEPCPCGSGKKYKQ HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEECCHHHCCCCCCCCCCCCCHHHH CHGKLD HCCCCC >Mature Secondary Structure MITGLITKIIGSRNDRYLKKLRKVADEINKLEPQMKALSDEELKAKTIEFKERLASGESL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCHH DKILVEAFAVVRNASERVFGMRQFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCEEEEEHHHHHHH LSGKGVHIITVNDYLAGRDAKWNAKLFEFLGLTVGINISGMSGDQKRAAYAADITYGTNN HCCCCEEEEEECHHHCCCCCCCCHHHHHHHCCEEEEEEECCCCCCHHHEEEEEEEECCCC EFGFDYLRDNMAFEAQQRVMRSLHYAIIDEVDSILIDEARTPLIISGPTDGDATLYTELN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHH TVIPMLTQQDKEDTEEYIGEGDFTVDEKNKQVLLTERGQEKVEVILQERGLLDENQSLYS HHHHHHHCCCHHHHHHHCCCCCCEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHH AASISLLHHVNAALRAHTLFEKDVEYIVTEKGEVVIVDEHSGRTMPGRRWSEGLHQAVEA HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHH KEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQSIYGLETIVIPTNQAMI HCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEE RKDGGDLVYLTEQEKYQAIVDDIKPRLEKGQPILVGTVSIEHSELLSDLMDKAKIKHSVL EECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH NAKFHAKEADIIAQAGALGSVTIATNMAGRGTDIVLGGNLEARLDKLGDVSPKEIEAEKE CCHHCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHH LWKEEHKKVLKAGGLYIVGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDSLMRIFA HHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH SEKVSNMMKKLGMEKGEAIEHPWVSRAIENAQRKVEGRNFDMRKSLLDFDDVSNEQRKVI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCHHHHHH YQQRNGVIDSEEITETIEQIWDDVFHNCVNEYVPPHSLTEQWDLEGLEQRLKADFLVDLP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEECC VRQWSIDDANLQEGSIREKVVEHAKASYLAKKEQVGPAIIGSFEKSVMLQTIDTLWKEHL CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AAMDHLRQGIHLRGYAQKDPKQEYKRESFELFLQMLENLKREVVVILSKVQVQSKEEADV HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IQEQRRQAEAKAQLEMKHAQVNKGEVVSDENTGDDTFVRNEKKVGRNEPCPCGSGKKYKQ HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEECCHHHCCCCCCCCCCCCCHHHH CHGKLD HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA