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The map label for this gene is ydfG [C]

Identifier: 119944758

GI number: 119944758

Start: 1256765

End: 1257487

Strand: Direct

Name: ydfG [C]

Synonym: Ping_1000

Alternate gene names: 119944758

Gene position: 1256765-1257487 (Clockwise)

Preceding gene: 119944757

Following gene: 119944759

Centisome position: 27.56

GC content: 39.56

Gene sequence:

>723_bases
ATGAAACGTATCTTAATTACAGGCGCCACCTCCGGCATTGGTAAAGCCTTGTGTTTGCTTTATCAGAAGCAAGGTTATGC
CGTTATTGCCTGTGGTCGTAATCAACAAGCCTTAGATGAACTGCGTAGTTTAAAAAATGTGTCAACATTAAGCTTTGATA
TCAGTGACAAAGAGCAAGTCGAAGAGGCTCTGAGAACACTGCCTGAGTTAGACATGGTTATTTTAAATGCGGGTAGTTGC
GAATATATCGATAATGCCAAAAATTTTGACGGGGATCTCTTTGCACGCGTTATTACCACCAATTTAATCGCTTTGGGCTA
TTGCTTACAGAGTGTGTTACCGAAAATAAAAAAAGGCGGACAACTCGCTTTAATGGGCTCAAGCGCAATTTATTTACCTT
TTTCTCGGGCAGAAGCCTACGGGGCGAGTAAAGCGGGGGTTGCTTATTTAGCTAAAACCTTGGCGATCGACCTTATTGAT
GATCAGATCAGTGTTTGTTTGATTAATCCCGGTTTTGTGAAAACGCCTTTAACGGATAAAAATGCTTTTTCTATGCCTAT
GCTGATAACAGCTGATAAGGCTGCTGACTATATTTTTAAAGGGTTGCTTAAAGGTAAAAAAGAAATACATTTTCCTGCTT
TTTTTACCTTTACGCTGAAAATATTAGCCTTCTTTCCGGACGCCGTTTGGTTTTTTATTGCGACAAGGATGATTAATAAA
TGA

Upstream 100 bases:

>100_bases
TTTATTACCACCGAGATTTTCTTGATATGGGGCAAATGTTGTATGAGCATCTGCCCTTGCTCGGTGGCGTTATTCGAATG
GTTAAAAACCGGGTTGCTTC

Downstream 100 bases:

>100_bases
AAAAAATAGCCATTGTAGGAAGTGGTATTTCGGGACTTACTTGTGCGCATCTGTTAAATGAAAAACACGATATCTCTGTT
TTTGAAGCAGGGAATTATAT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKRILITGATSGIGKALCLLYQKQGYAVIACGRNQQALDELRSLKNVSTLSFDISDKEQVEEALRTLPELDMVILNAGSC
EYIDNAKNFDGDLFARVITTNLIALGYCLQSVLPKIKKGGQLALMGSSAIYLPFSRAEAYGASKAGVAYLAKTLAIDLID
DQISVCLINPGFVKTPLTDKNAFSMPMLITADKAADYIFKGLLKGKKEIHFPAFFTFTLKILAFFPDAVWFFIATRMINK

Sequences:

>Translated_240_residues
MKRILITGATSGIGKALCLLYQKQGYAVIACGRNQQALDELRSLKNVSTLSFDISDKEQVEEALRTLPELDMVILNAGSC
EYIDNAKNFDGDLFARVITTNLIALGYCLQSVLPKIKKGGQLALMGSSAIYLPFSRAEAYGASKAGVAYLAKTLAIDLID
DQISVCLINPGFVKTPLTDKNAFSMPMLITADKAADYIFKGLLKGKKEIHFPAFFTFTLKILAFFPDAVWFFIATRMINK
>Mature_240_residues
MKRILITGATSGIGKALCLLYQKQGYAVIACGRNQQALDELRSLKNVSTLSFDISDKEQVEEALRTLPELDMVILNAGSC
EYIDNAKNFDGDLFARVITTNLIALGYCLQSVLPKIKKGGQLALMGSSAIYLPFSRAEAYGASKAGVAYLAKTLAIDLID
DQISVCLINPGFVKTPLTDKNAFSMPMLITADKAADYIFKGLLKGKKEIHFPAFFTFTLKILAFFPDAVWFFIATRMINK

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=29.8969072164948, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787820, Length=178, Percent_Identity=32.0224719101124, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789378, Length=187, Percent_Identity=25.668449197861, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=190, Percent_Identity=26.8421052631579, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=204, Percent_Identity=26.4705882352941, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=223, Percent_Identity=29.5964125560538, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6322226, Length=185, Percent_Identity=28.1081081081081, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24643142, Length=193, Percent_Identity=33.160621761658, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI23397609, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574402, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26328; Mature: 26328

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILITGATSGIGKALCLLYQKQGYAVIACGRNQQALDELRSLKNVSTLSFDISDKEQV
CCEEEEECCCCHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCHHHH
EEALRTLPELDMVILNAGSCEYIDNAKNFDGDLFARVITTNLIALGYCLQSVLPKIKKGG
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QLALMGSSAIYLPFSRAEAYGASKAGVAYLAKTLAIDLIDDQISVCLINPGFVKTPLTDK
EEEEECCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHEECCCEEEEEECCCEEECCCCCC
NAFSMPMLITADKAADYIFKGLLKGKKEIHFPAFFTFTLKILAFFPDAVWFFIATRMINK
CCCCCCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRILITGATSGIGKALCLLYQKQGYAVIACGRNQQALDELRSLKNVSTLSFDISDKEQV
CCEEEEECCCCHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCHHHH
EEALRTLPELDMVILNAGSCEYIDNAKNFDGDLFARVITTNLIALGYCLQSVLPKIKKGG
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QLALMGSSAIYLPFSRAEAYGASKAGVAYLAKTLAIDLIDDQISVCLINPGFVKTPLTDK
EEEEECCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHEECCCEEEEEECCCEEECCCCCC
NAFSMPMLITADKAADYIFKGLLKGKKEIHFPAFFTFTLKILAFFPDAVWFFIATRMINK
CCCCCCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]