Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944726
Identifier: 119944726
GI number: 119944726
Start: 1213725
End: 1215650
Strand: Direct
Name: 119944726
Synonym: Ping_0967
Alternate gene names: NA
Gene position: 1213725-1215650 (Clockwise)
Preceding gene: 119944725
Following gene: 119944727
Centisome position: 26.62
GC content: 41.33
Gene sequence:
>1926_bases ATGAAGATCAACATAAGCTCCAGTCATCAACAACTAGCAGGCCAATTAATGACAGCCGAACTACTCGAAATTCAAAGTTT TATTGCTCAGTACGCCCCTTTTGATCAGCTTCCTGAACAAGTAATAGTTAAAGTTGCGCAAAGTGTTGAAATCTCTTATT ACCGTGCAGATAGCATGATTATTGACTTTAATGACAAAATTCATGAACTGTATATTATCCGCAGTGGGGTAGTAGAGTTA TATCGCCGTAAAGGTGAACTTTATAATCGTCTTGATCAAGGGCAGTTATTTGGACAAATGGGGTTGCTAACGAATAATAA AGTACGTTTTCCTGCCAAAGCGGTAAAAGACACACTTTTATACGTTATTCCTGAGTCTGTCTTCAATGAGTTGTGCGAAT CTTATGACGATTTCGCTGACTTTGTTGAGGTAGAGGACAGCATGCGTTTAAAACAGGCGGTAAAAGGTAAAAGCGACAGT GATAAAGCGCTGACCACGTCCAAAGTAAAAACATTGCTGACTAGAGCGCCACTGGTGCTTCCCCGCAGCAGCACTATTCA AGCGGTCGCGCAGATAATGGCCAGCGAAAATATTTCTGCAGCATTGATTAATGATCCTGATGCGGAGGATGAGGAGGGTA GCAGTTTCGTGGGTATTATTACGGAACATGATCTCTGCGCTAACGTTATTGCATTGGGATTAAGTGTTGATAATCCTATT TCACAAGTCATGTCGACTGATTTAATTTCACTGGATCATAACGCTTATATTTTTGAGGCGATGCTGCTTATGCTGCGTTA TAACATTCATCACCTACCTATTCTAAAAAACAAAAAACCCATTGGTCTGATTGAAGTGGCAGATATTATCCGTTACGAAT CGCAAAATAGTTTGTTATTTGTAAGCAGTATCTTCCAGCAAAAAAGTAGCGAGGATTTAGCACATCTTTCTGCGCAGTTA AAAAACTGTTTTGTACGCATGGTTAATGAGGATGCTAATTCTCATATGGTTGGACGTGCAATGTCTGAAATTGGCCGCAG CTTTAAGCAGCGTTTACTGACGCTCGCAGAAGAAAAGTTGGGCCCACCCCCTATACCCTACTGTTTTTTAGCGCTTGGCT CGATGGCTCGAGATGAACAGCTTATGGTCACCGATCAGGATAATGCTCTTATTCTTGATAATAGTTATCAGATCGATCTG CATGGTCCATATTTCGAGCAGTTAGCCGAGTTTGTTTGTGATGGTTTAGCCGCCTGTGGTTACACTTACTGCACGGGTTA TATTATGGCAACCAATCCTGAGTACCGTAAAACACAATCCCAGTGGGAAGATTGTTTTGCTGACTGGATAGATAATCCAA ACCCGCAAGCTTTATTAAACTGCTCTATTTTCTTTGATTTGACGGGTGTTTATGGCAGGTTAAAATGGGCTGAGCAGTTA AATGCTTTTATCCTGCGTAGAGCCAAGAAAAATAACCGTTTCCTTGCCTGTTTGGCGCAAAATGCGCGTAATCGGACTCC TCCATTGGGTTTCTTTAAAGATTTTGTGATGGAAAAAGACGGCCGCCATAACAATTCAATTAATTTAAAACGTCGTGGCA CGGCGCCGCTTGCGGATCTTGTGCGCGTGCATGCACTGGCGATTGGCTCGCCATCGCAAAACTCATTTGAACGCTTAGAC GATATTATCGAAGCGGGTATTTTGCCAAAATCAAAGGGCGAAGATCTAAAGCATGCAATGGAGCTTCTCTCTCTGGTACG TTTACGTCATCAGGCAATGGATATAAAGTCGGGGATTGAACCGGATAATAATATTGAACCAGAAAGTATGTCTGATTTTG AAAGGCGTAATCTTAAAGATGCCTTTTTAGTGCTTAGCAATGCGCAAAACTTTTTAAAATATCGTTATAGTGGCAATAAA TTTTAA
Upstream 100 bases:
>100_bases TTTGAGACAGAGAGATCTGCATGCCTTAGTTTTTTTACTATTATTACGCGATGATATGCCTGTAAATTAGGGGCTGACCT TTTACTCCTATAATATCTAC
Downstream 100 bases:
>100_bases AGGTTAAATAATGAATAATTTCAATGACCATGAGATTTTAAACTGGGCAGCCTTTCTGCAGTTAAAAGAGCAGCTCAGTA AAGATTCACGTTTGAAGAAT
Product: nucleotidyltransferase
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; Signal Protein; CBS Domain Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; Cyclic-Nucleotide Signal Transduction Protein; DNA Polymerase III Subunit Epsilon; Multidomain-Containing Protein; CBS Signal-Transduction Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MKINISSSHQQLAGQLMTAELLEIQSFIAQYAPFDQLPEQVIVKVAQSVEISYYRADSMIIDFNDKIHELYIIRSGVVEL YRRKGELYNRLDQGQLFGQMGLLTNNKVRFPAKAVKDTLLYVIPESVFNELCESYDDFADFVEVEDSMRLKQAVKGKSDS DKALTTSKVKTLLTRAPLVLPRSSTIQAVAQIMASENISAALINDPDAEDEEGSSFVGIITEHDLCANVIALGLSVDNPI SQVMSTDLISLDHNAYIFEAMLLMLRYNIHHLPILKNKKPIGLIEVADIIRYESQNSLLFVSSIFQQKSSEDLAHLSAQL KNCFVRMVNEDANSHMVGRAMSEIGRSFKQRLLTLAEEKLGPPPIPYCFLALGSMARDEQLMVTDQDNALILDNSYQIDL HGPYFEQLAEFVCDGLAACGYTYCTGYIMATNPEYRKTQSQWEDCFADWIDNPNPQALLNCSIFFDLTGVYGRLKWAEQL NAFILRRAKKNNRFLACLAQNARNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLVRVHALAIGSPSQNSFERLD DIIEAGILPKSKGEDLKHAMELLSLVRLRHQAMDIKSGIEPDNNIEPESMSDFERRNLKDAFLVLSNAQNFLKYRYSGNK F
Sequences:
>Translated_641_residues MKINISSSHQQLAGQLMTAELLEIQSFIAQYAPFDQLPEQVIVKVAQSVEISYYRADSMIIDFNDKIHELYIIRSGVVEL YRRKGELYNRLDQGQLFGQMGLLTNNKVRFPAKAVKDTLLYVIPESVFNELCESYDDFADFVEVEDSMRLKQAVKGKSDS DKALTTSKVKTLLTRAPLVLPRSSTIQAVAQIMASENISAALINDPDAEDEEGSSFVGIITEHDLCANVIALGLSVDNPI SQVMSTDLISLDHNAYIFEAMLLMLRYNIHHLPILKNKKPIGLIEVADIIRYESQNSLLFVSSIFQQKSSEDLAHLSAQL KNCFVRMVNEDANSHMVGRAMSEIGRSFKQRLLTLAEEKLGPPPIPYCFLALGSMARDEQLMVTDQDNALILDNSYQIDL HGPYFEQLAEFVCDGLAACGYTYCTGYIMATNPEYRKTQSQWEDCFADWIDNPNPQALLNCSIFFDLTGVYGRLKWAEQL NAFILRRAKKNNRFLACLAQNARNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLVRVHALAIGSPSQNSFERLD DIIEAGILPKSKGEDLKHAMELLSLVRLRHQAMDIKSGIEPDNNIEPESMSDFERRNLKDAFLVLSNAQNFLKYRYSGNK F >Mature_641_residues MKINISSSHQQLAGQLMTAELLEIQSFIAQYAPFDQLPEQVIVKVAQSVEISYYRADSMIIDFNDKIHELYIIRSGVVEL YRRKGELYNRLDQGQLFGQMGLLTNNKVRFPAKAVKDTLLYVIPESVFNELCESYDDFADFVEVEDSMRLKQAVKGKSDS DKALTTSKVKTLLTRAPLVLPRSSTIQAVAQIMASENISAALINDPDAEDEEGSSFVGIITEHDLCANVIALGLSVDNPI SQVMSTDLISLDHNAYIFEAMLLMLRYNIHHLPILKNKKPIGLIEVADIIRYESQNSLLFVSSIFQQKSSEDLAHLSAQL KNCFVRMVNEDANSHMVGRAMSEIGRSFKQRLLTLAEEKLGPPPIPYCFLALGSMARDEQLMVTDQDNALILDNSYQIDL HGPYFEQLAEFVCDGLAACGYTYCTGYIMATNPEYRKTQSQWEDCFADWIDNPNPQALLNCSIFFDLTGVYGRLKWAEQL NAFILRRAKKNNRFLACLAQNARNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLVRVHALAIGSPSQNSFERLD DIIEAGILPKSKGEDLKHAMELLSLVRLRHQAMDIKSGIEPDNNIEPESMSDFERRNLKDAFLVLSNAQNFLKYRYSGNK F
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72377; Mature: 72377
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINISSSHQQLAGQLMTAELLEIQSFIAQYAPFDQLPEQVIVKVAQSVEISYYRADSMI CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHEEEEEECCCEE IDFNDKIHELYIIRSGVVELYRRKGELYNRLDQGQLFGQMGLLTNNKVRFPAKAVKDTLL EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHH YVIPESVFNELCESYDDFADFVEVEDSMRLKQAVKGKSDSDKALTTSKVKTLLTRAPLVL HEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEC PRSSTIQAVAQIMASENISAALINDPDAEDEEGSSFVGIITEHDLCANVIALGLSVDNPI CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHH SQVMSTDLISLDHNAYIFEAMLLMLRYNIHHLPILKNKKPIGLIEVADIIRYESQNSLLF HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEH VSSIFQQKSSEDLAHLSAQLKNCFVRMVNEDANSHMVGRAMSEIGRSFKQRLLTLAEEKL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GPPPIPYCFLALGSMARDEQLMVTDQDNALILDNSYQIDLHGPYFEQLAEFVCDGLAACG CCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHCC YTYCTGYIMATNPEYRKTQSQWEDCFADWIDNPNPQALLNCSIFFDLTGVYGRLKWAEQL HHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHH NAFILRRAKKNNRFLACLAQNARNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADL HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH VRVHALAIGSPSQNSFERLDDIIEAGILPKSKGEDLKHAMELLSLVRLRHQAMDIKSGIE HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PDNNIEPESMSDFERRNLKDAFLVLSNAQNFLKYRYSGNKF CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKINISSSHQQLAGQLMTAELLEIQSFIAQYAPFDQLPEQVIVKVAQSVEISYYRADSMI CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHEEEEEECCCEE IDFNDKIHELYIIRSGVVELYRRKGELYNRLDQGQLFGQMGLLTNNKVRFPAKAVKDTLL EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHH YVIPESVFNELCESYDDFADFVEVEDSMRLKQAVKGKSDSDKALTTSKVKTLLTRAPLVL HEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEC PRSSTIQAVAQIMASENISAALINDPDAEDEEGSSFVGIITEHDLCANVIALGLSVDNPI CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHH SQVMSTDLISLDHNAYIFEAMLLMLRYNIHHLPILKNKKPIGLIEVADIIRYESQNSLLF HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEH VSSIFQQKSSEDLAHLSAQLKNCFVRMVNEDANSHMVGRAMSEIGRSFKQRLLTLAEEKL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GPPPIPYCFLALGSMARDEQLMVTDQDNALILDNSYQIDLHGPYFEQLAEFVCDGLAACG CCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHCC YTYCTGYIMATNPEYRKTQSQWEDCFADWIDNPNPQALLNCSIFFDLTGVYGRLKWAEQL HHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHH NAFILRRAKKNNRFLACLAQNARNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADL HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH VRVHALAIGSPSQNSFERLDDIIEAGILPKSKGEDLKHAMELLSLVRLRHQAMDIKSGIE HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PDNNIEPESMSDFERRNLKDAFLVLSNAQNFLKYRYSGNKF CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA