| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944702
Identifier: 119944702
GI number: 119944702
Start: 1175323
End: 1175760
Strand: Reverse
Name: 119944702
Synonym: Ping_0941
Alternate gene names: NA
Gene position: 1175760-1175323 (Counterclockwise)
Preceding gene: 119944703
Following gene: 119944700
Centisome position: 25.79
GC content: 38.81
Gene sequence:
>438_bases ATGCTCAATTTTTACCAACTCATTGTGGACAAAATGCAATGTTACTTTACCCCTATATTGCTGTTATTCACCCGTCTTTG GGTCGCCTCTGTGTATCTAAAATCTGGTTATTTAAAAATAACCAGCTGGGATAGTACCTTGTACCTATTTGAAGAGGAGT ATCAGGTTCCCTTTTTACCCTGGGAATTAGCCGCATATTTAGGAACAGCAGCAGAGTTGCTACTGCCGATATTTCTGATT TTAGGTTTATTAACACGCCCAATGGCGGCCATTTTATTTGTTTTTAATATTATGGCCGTTGTCTCATACCCGGTTCTTTG GGAGGGTGGTTTCTATGATCACCAGCTATGGGGCTTAATGATATTAATAAATGTTGCTTGGGGAGCGGGATTAATCTCGA TTGATCAGCCATTAAAGAAACATTTTTTTGCAAAATAA
Upstream 100 bases:
>100_bases TGGGGCAAATAGCGCCACAATCGTTACTTGAGGGATTGCCTCAATTATTAGAGAAAGATCTACTTTACGGATTTACATTA ATAAATGCCTAGGAGGCATT
Downstream 100 bases:
>100_bases TTTAGAGTCTGCTTATCTTTCGAGGTTAATTCTTGGAAATTAACAGATCCCAGCCGTAATAACCTTTTTGGATATGACGG CGCAGGCAATTTTATTTTTT
Product: DoxX family protein
Products: NA
Alternate protein names: DoxD Family Protein; DoxX Family Protein; NADH Dehydrogenase
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLNFYQLIVDKMQCYFTPILLLFTRLWVASVYLKSGYLKITSWDSTLYLFEEEYQVPFLPWELAAYLGTAAELLLPIFLI LGLLTRPMAAILFVFNIMAVVSYPVLWEGGFYDHQLWGLMILINVAWGAGLISIDQPLKKHFFAK
Sequences:
>Translated_145_residues MLNFYQLIVDKMQCYFTPILLLFTRLWVASVYLKSGYLKITSWDSTLYLFEEEYQVPFLPWELAAYLGTAAELLLPIFLI LGLLTRPMAAILFVFNIMAVVSYPVLWEGGFYDHQLWGLMILINVAWGAGLISIDQPLKKHFFAK >Mature_145_residues MLNFYQLIVDKMQCYFTPILLLFTRLWVASVYLKSGYLKITSWDSTLYLFEEEYQVPFLPWELAAYLGTAAELLLPIFLI LGLLTRPMAAILFVFNIMAVVSYPVLWEGGFYDHQLWGLMILINVAWGAGLISIDQPLKKHFFAK
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16795; Mature: 16795
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFYQLIVDKMQCYFTPILLLFTRLWVASVYLKSGYLKITSWDSTLYLFEEEYQVPFLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCH WELAAYLGTAAELLLPIFLILGLLTRPMAAILFVFNIMAVVSYPVLWEGGFYDHQLWGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHH ILINVAWGAGLISIDQPLKKHFFAK HHHHHHHCCCEEECCHHHHHHCCCC >Mature Secondary Structure MLNFYQLIVDKMQCYFTPILLLFTRLWVASVYLKSGYLKITSWDSTLYLFEEEYQVPFLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCH WELAAYLGTAAELLLPIFLILGLLTRPMAAILFVFNIMAVVSYPVLWEGGFYDHQLWGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHH ILINVAWGAGLISIDQPLKKHFFAK HHHHHHHCCCEEECCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA