Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944618
Identifier: 119944618
GI number: 119944618
Start: 1074583
End: 1074867
Strand: Direct
Name: 119944618
Synonym: Ping_0857
Alternate gene names: NA
Gene position: 1074583-1074867 (Clockwise)
Preceding gene: 119944617
Following gene: 119944619
Centisome position: 23.57
GC content: 39.65
Gene sequence:
>285_bases ATGGGATTTTTTAAACAGTTCGCGCAATTAATTAGCGGCAAACCGGCTCCTGCCGTGGTTTTTCCAAGTATTGAATACAA AGGGTTTACTATTAGACCGGAACCAATGAAGGATAACGGGCAATTTCGCGTTGCAGCTATGATAGAAAAAGGGGAAGGTG AAACACTTAAACAACATCATTTTATCCGCTCTGATAGTCAGGCAAGCAGTGAAAAAACCGCTGAATTAACGCTGTTGAAA TGTAAAATGTTTATCGATCAGTCTGGTGATGACATCTTTAAATAG
Upstream 100 bases:
>100_bases GTACAACTTAGGTTATGCAGAAAAAGTATTGGTATGATTAAAATAGTTCAATATTCATACTAATACTAACAACAGTTCCA GACAAAAATGAGGATGTAAA
Downstream 100 bases:
>100_bases GGCTGCAGGCGAAAACATTAAGTAACAATGTTAAATAATAATGTTAAGTAATGTTTTTATTTTTTTATTTTTCTGTTTTG ATGGCGAATAAAAAAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MGFFKQFAQLISGKPAPAVVFPSIEYKGFTIRPEPMKDNGQFRVAAMIEKGEGETLKQHHFIRSDSQASSEKTAELTLLK CKMFIDQSGDDIFK
Sequences:
>Translated_94_residues MGFFKQFAQLISGKPAPAVVFPSIEYKGFTIRPEPMKDNGQFRVAAMIEKGEGETLKQHHFIRSDSQASSEKTAELTLLK CKMFIDQSGDDIFK >Mature_93_residues GFFKQFAQLISGKPAPAVVFPSIEYKGFTIRPEPMKDNGQFRVAAMIEKGEGETLKQHHFIRSDSQASSEKTAELTLLKC KMFIDQSGDDIFK
Specific function: Unknown
COG id: COG5453
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10572; Mature: 10441
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFKQFAQLISGKPAPAVVFPSIEYKGFTIRPEPMKDNGQFRVAAMIEKGEGETLKQHH CCHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCHHHHH FIRSDSQASSEKTAELTLLKCKMFIDQSGDDIFK CCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCCC >Mature Secondary Structure GFFKQFAQLISGKPAPAVVFPSIEYKGFTIRPEPMKDNGQFRVAAMIEKGEGETLKQHH CHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCHHHHH FIRSDSQASSEKTAELTLLKCKMFIDQSGDDIFK CCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA