| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944611
Identifier: 119944611
GI number: 119944611
Start: 1062772
End: 1063323
Strand: Reverse
Name: 119944611
Synonym: Ping_0850
Alternate gene names: NA
Gene position: 1063323-1062772 (Counterclockwise)
Preceding gene: 119944613
Following gene: 119944601
Centisome position: 23.32
GC content: 43.84
Gene sequence:
>552_bases ATGTCAAACTTCAAAATCCATACCATTGAGTCGGCTCCCGCAGAAAGTAAAGAAATCCTAGAAGGTGCAAAAGAAAAGAT GGGTGTTGTTCCTGGTCTTTTCGGCGTACTGTCTGAATCCCCCAACACACTTAAAGCTTACACTCAGTTACACCAGCTCT TTGCAAGCTCATCTTTTGATGCAGAAGAGCTAACCGTTGTATGGCAAACAATTAACGTTGAGCACGACTGTCATTACTGC GTGCCTGCGCACACAGGTATTGCACATTCAATGAAGGTCGATCCTGCTCTGACTGAAGCGTTACGTAACAGTGAAGCAAT GCCAACTGAGAAACTACAAGCATTACAAGACTTTACCTTAAGCATGGTGCGTAACCGTGGTAATGTTTCTGAGCAACAGA CGCAAGCATTCTTTGCTGCGGGCTACGGACAACAGCAGATTCTTGAAGTGATTCTTGGTCTTTCTCAAAAAGTGATCAGT AACTACGTGAACCACTCTGCAAAAACGCCCGTCGATCCTATGTTTGAACAATTCGCTTGGACTAAAAAATAA
Upstream 100 bases:
>100_bases TAAATCTTGAACGATCGCTCAATTGTATTTATAGTACTCTTAATTCAAGGAACAACGGTTCCAATTAAATGAAATTTAAA TCAATAGAGAGAGAACCATT
Downstream 100 bases:
>100_bases GCGTCATAAAAAATTAAGATTGCTTCTTCTCTTTTTGAAGGGGCAAACCAAGTGTCATCATTTTTCTTCACCATCCGGTT ATATTGCTCTTTGCTATATT
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: Alkylhydroperoxidase; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase AhpD Domain Protein; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; 24 KDa Macrophage-Induced Protein; AhpD-Like Alkylhydroperoxidase; 4-Carboxymuconolactone Decarboxylase; Macrophage Infectivity Potentiator Protein; Macrophage Infectivity Potentiator-Related Protein; Peroxidase; Alkylhydroperoxidase AhpD Family Protein; AhpD Family Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSNFKIHTIESAPAESKEILEGAKEKMGVVPGLFGVLSESPNTLKAYTQLHQLFASSSFDAEELTVVWQTINVEHDCHYC VPAHTGIAHSMKVDPALTEALRNSEAMPTEKLQALQDFTLSMVRNRGNVSEQQTQAFFAAGYGQQQILEVILGLSQKVIS NYVNHSAKTPVDPMFEQFAWTKK
Sequences:
>Translated_183_residues MSNFKIHTIESAPAESKEILEGAKEKMGVVPGLFGVLSESPNTLKAYTQLHQLFASSSFDAEELTVVWQTINVEHDCHYC VPAHTGIAHSMKVDPALTEALRNSEAMPTEKLQALQDFTLSMVRNRGNVSEQQTQAFFAAGYGQQQILEVILGLSQKVIS NYVNHSAKTPVDPMFEQFAWTKK >Mature_182_residues SNFKIHTIESAPAESKEILEGAKEKMGVVPGLFGVLSESPNTLKAYTQLHQLFASSSFDAEELTVVWQTINVEHDCHYCV PAHTGIAHSMKVDPALTEALRNSEAMPTEKLQALQDFTLSMVRNRGNVSEQQTQAFFAAGYGQQQILEVILGLSQKVISN YVNHSAKTPVDPMFEQFAWTKK
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20299; Mature: 20168
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFKIHTIESAPAESKEILEGAKEKMGVVPGLFGVLSESPNTLKAYTQLHQLFASSSFD CCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC AEELTVVWQTINVEHDCHYCVPAHTGIAHSMKVDPALTEALRNSEAMPTEKLQALQDFTL HHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH SMVRNRGNVSEQQTQAFFAAGYGQQQILEVILGLSQKVISNYVNHSAKTPVDPMFEQFAW HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC TKK CCC >Mature Secondary Structure SNFKIHTIESAPAESKEILEGAKEKMGVVPGLFGVLSESPNTLKAYTQLHQLFASSSFD CCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC AEELTVVWQTINVEHDCHYCVPAHTGIAHSMKVDPALTEALRNSEAMPTEKLQALQDFTL HHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH SMVRNRGNVSEQQTQAFFAAGYGQQQILEVILGLSQKVISNYVNHSAKTPVDPMFEQFAW HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC TKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA