| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944609
Identifier: 119944609
GI number: 119944609
Start: 1058990
End: 1060291
Strand: Direct
Name: 119944609
Synonym: Ping_0848
Alternate gene names: NA
Gene position: 1058990-1060291 (Clockwise)
Preceding gene: 119944608
Following gene: 119944610
Centisome position: 23.23
GC content: 47.7
Gene sequence:
>1302_bases ATGAAAAATATATTATTAAAAACCTGCTTAACCGCTTTGGCTTTGTCCGTTGCTGGTTTAGCAAATGCTCAAGATGCAGG CGAACCAGTAAAAATCTTTAAGGAGCAGTTGACGTCCCATGCTGCTATATCCGCTGCTGCGATAAGTATCTCTGCAGACT CTTTCGTAGACGGTCATATAGCTTCGCAAGCGGCCGTTACCACAGGAGCTGGGTCTGTAGTTCAAAACATCGTTAGTGGC GCCGCTACGGGTATAGGGGCAGCTGCTAAAACCTGCGATATTTATGCTGGAGCCGCCATTGCCGTAGGCGCGGGCAGTAC AGTCGGCATTTTGAGTGCAGGTGGAGCTGTCACGTTGGGCGCGTTGGCGGATAGAGATGTGATTTGCGATTCAGCGCCAG CGGTAGTCACCAGCGACTTCGATGCAGCGAACGCTCAGATAAAAAGTGCACAGTCTGCTTTAGATACTATCCCCGCTTCC TCATTAGTGGATGCGTATACGTTGGTAGGCAGCATGGACACTGGCGTATATGAGGGCGCTGCTATTACCATACCCGCGAA CACGCTCATTACGTTTGATGCTAATGGGGAGGACGGGGTTTGGATTTTCAAATTGAGTGGGGCAATGACCGTAGGTGCAG GTAGTGAATTTGAAATAATTAACGCAGGCGATAATAATGCTGTTATTTGGGATATAGGCGGCGCACTTACTCTGGGTGCT GGCTCAACTTTCCTTGGCACCGCATTTGTAGAGGGCGCCGTGTCCGGTGCGACCGCATCGGTTAGTTGTGGTAACTTATA TGCTACGGGCGCCATCTCTATCGGCAACATCGGTAGCATCGGGGGTGATGATTGTAAAGTCGCAGCTGACCAGTTGGCCG ATTTTTCGATAGAAGAAGGTGAATATTCTTTTATACCACAGGGGAAGCGAATTTCCGAGTGCCCATTATGGGAGAAATTG GATGCAAATTACGGGGGAGACGCATGGAAACATTACAGGGACATAATATTTAAATCGCCGGATTTAAAATTAAAAGAAGC ACCAGCATCCACAGGTTATGGCGGACTTGCCACTAAATATCGATTCGATAGCCCCACTTCATATGGACAGTTCCTCGTCA TCACAGACGCACAATATAGTATCATGAACTCGATTTTCCTTCGTCATACCGACTTAAGCGATGGATATACTTCCAATGTT GCTAGAATAAAGCAAGATGATATGCTCAAAAAGGATTACGATGAAGCCGCCGCCGCTTGCCGCACGGATTTACACGATAT TTTTATAAACCAGACCAACTGA
Upstream 100 bases:
>100_bases CACTTCACGTAATGAGTGTTGATTAATTGGAGGTCCTTACCTCACAAATACAGTCACCTCATGATGGGGTATCTCACATT ATATTAAATGGAAGTAAATA
Downstream 100 bases:
>100_bases GCTGGGAGAGGCTTCGTTTATCATAGAGGTGCAATCCTTAGTTCCCAGTCCAGCCTTGACCCATCGCTGCCAACGTTTTA CATACTGACCTAAGGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKNILLKTCLTALALSVAGLANAQDAGEPVKIFKEQLTSHAAISAAAISISADSFVDGHIASQAAVTTGAGSVVQNIVSG AATGIGAAAKTCDIYAGAAIAVGAGSTVGILSAGGAVTLGALADRDVICDSAPAVVTSDFDAANAQIKSAQSALDTIPAS SLVDAYTLVGSMDTGVYEGAAITIPANTLITFDANGEDGVWIFKLSGAMTVGAGSEFEIINAGDNNAVIWDIGGALTLGA GSTFLGTAFVEGAVSGATASVSCGNLYATGAISIGNIGSIGGDDCKVAADQLADFSIEEGEYSFIPQGKRISECPLWEKL DANYGGDAWKHYRDIIFKSPDLKLKEAPASTGYGGLATKYRFDSPTSYGQFLVITDAQYSIMNSIFLRHTDLSDGYTSNV ARIKQDDMLKKDYDEAAAACRTDLHDIFINQTN
Sequences:
>Translated_433_residues MKNILLKTCLTALALSVAGLANAQDAGEPVKIFKEQLTSHAAISAAAISISADSFVDGHIASQAAVTTGAGSVVQNIVSG AATGIGAAAKTCDIYAGAAIAVGAGSTVGILSAGGAVTLGALADRDVICDSAPAVVTSDFDAANAQIKSAQSALDTIPAS SLVDAYTLVGSMDTGVYEGAAITIPANTLITFDANGEDGVWIFKLSGAMTVGAGSEFEIINAGDNNAVIWDIGGALTLGA GSTFLGTAFVEGAVSGATASVSCGNLYATGAISIGNIGSIGGDDCKVAADQLADFSIEEGEYSFIPQGKRISECPLWEKL DANYGGDAWKHYRDIIFKSPDLKLKEAPASTGYGGLATKYRFDSPTSYGQFLVITDAQYSIMNSIFLRHTDLSDGYTSNV ARIKQDDMLKKDYDEAAAACRTDLHDIFINQTN >Mature_433_residues MKNILLKTCLTALALSVAGLANAQDAGEPVKIFKEQLTSHAAISAAAISISADSFVDGHIASQAAVTTGAGSVVQNIVSG AATGIGAAAKTCDIYAGAAIAVGAGSTVGILSAGGAVTLGALADRDVICDSAPAVVTSDFDAANAQIKSAQSALDTIPAS SLVDAYTLVGSMDTGVYEGAAITIPANTLITFDANGEDGVWIFKLSGAMTVGAGSEFEIINAGDNNAVIWDIGGALTLGA GSTFLGTAFVEGAVSGATASVSCGNLYATGAISIGNIGSIGGDDCKVAADQLADFSIEEGEYSFIPQGKRISECPLWEKL DANYGGDAWKHYRDIIFKSPDLKLKEAPASTGYGGLATKYRFDSPTSYGQFLVITDAQYSIMNSIFLRHTDLSDGYTSNV ARIKQDDMLKKDYDEAAAACRTDLHDIFINQTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44358; Mature: 44358
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILLKTCLTALALSVAGLANAQDAGEPVKIFKEQLTSHAAISAAAISISADSFVDGHI CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHH ASQAAVTTGAGSVVQNIVSGAATGIGAAAKTCDIYAGAAIAVGAGSTVGILSAGGAVTLG HCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHEEECCCEEEECCCCEEEEEECCCCEEEC ALADRDVICDSAPAVVTSDFDAANAQIKSAQSALDTIPASSLVDAYTLVGSMDTGVYEGA CCCCCCEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCE AITIPANTLITFDANGEDGVWIFKLSGAMTVGAGSEFEIINAGDNNAVIWDIGGALTLGA EEEECCCEEEEEECCCCCCEEEEEECCEEEECCCCCEEEEECCCCCEEEEECCCEEEECC GSTFLGTAFVEGAVSGATASVSCGNLYATGAISIGNIGSIGGDDCKVAADQLADFSIEEG CCHHHHHHHHHHCCCCCEEEEECCCEEEECEEEECCCCCCCCCCHHHHHHHHHCCEECCC EYSFIPQGKRISECPLWEKLDANYGGDAWKHYRDIIFKSPDLKLKEAPASTGYGGLATKY CEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEE RFDSPTSYGQFLVITDAQYSIMNSIFLRHTDLSDGYTSNVARIKQDDMLKKDYDEAAAAC ECCCCCCCCCEEEEECCHHHHHHHHHEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH RTDLHDIFINQTN HCCCEEEEEECCC >Mature Secondary Structure MKNILLKTCLTALALSVAGLANAQDAGEPVKIFKEQLTSHAAISAAAISISADSFVDGHI CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHH ASQAAVTTGAGSVVQNIVSGAATGIGAAAKTCDIYAGAAIAVGAGSTVGILSAGGAVTLG HCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHEEECCCEEEECCCCEEEEEECCCCEEEC ALADRDVICDSAPAVVTSDFDAANAQIKSAQSALDTIPASSLVDAYTLVGSMDTGVYEGA CCCCCCEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCE AITIPANTLITFDANGEDGVWIFKLSGAMTVGAGSEFEIINAGDNNAVIWDIGGALTLGA EEEECCCEEEEEECCCCCCEEEEEECCEEEECCCCCEEEEECCCCCEEEEECCCEEEECC GSTFLGTAFVEGAVSGATASVSCGNLYATGAISIGNIGSIGGDDCKVAADQLADFSIEEG CCHHHHHHHHHHCCCCCEEEEECCCEEEECEEEECCCCCCCCCCHHHHHHHHHCCEECCC EYSFIPQGKRISECPLWEKLDANYGGDAWKHYRDIIFKSPDLKLKEAPASTGYGGLATKY CEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEE RFDSPTSYGQFLVITDAQYSIMNSIFLRHTDLSDGYTSNVARIKQDDMLKKDYDEAAAAC ECCCCCCCCCEEEEECCHHHHHHHHHEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH RTDLHDIFINQTN HCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA