Click here to switch to the map view.

The map label for this gene is hcaT [H]

Identifier: 119944602

GI number: 119944602

Start: 1050631

End: 1051773

Strand: Direct

Name: hcaT [H]

Synonym: Ping_0840

Alternate gene names: 119944602

Gene position: 1050631-1051773 (Clockwise)

Preceding gene: 119944600

Following gene: 119944603

Centisome position: 23.04

GC content: 36.13

Gene sequence:

>1143_bases
TTGTTTGCTATCCCTGCTTCATTTTGGTTGAGCTTATATTTTATTAGTTTTTTTTTTATTTGGGGAGTGTTTTTACCATT
TTGGGGTATTTGGTTATCGGGTAAGGGCATGTCCAGTGAAAGTATAGGTTTGTTTTTTTCAGTCGGTTTACTGTTAAGGT
TTGTCAGTAATCTGACCTTATTACCTATGGTCTCCAGTGCGAAATCCACATTACGTTTATTAAGAATATTAGGATTTTTC
ACGGTACTGGCTTTTGCATTGTTATTATTTTTTAATGGTTATATGTGGTTAGCCGGCATTACGTTAGTTGCCAATTTTAT
GATGGGGCCATTAGCGCCTTTAGGTGACCTTATTGGTGCCCGTTTAGTGAATCAAATTCAGCTCGATTATGGCAGGGTTC
GTTTATGGGGTTCTCTTAGTTTTATTGTCGGTTCAACCAGTGTTGGTTGGTTGATTGTTGGGTTAGGAAACGATGCGATT
TTATGGTCAATTATGGGTGCGGCATTAATAATGTGGTTACTTTCATTATTAAACTTATCGCCGCAATTGCATGATCAAAT
TGACTTAAACTTAGATGAAAAAAAATCTCTGTTTACACTGTTTAAACGACCCAGTGTACTGTTTTTTTTAATTATTGTTG
GCTCAATTCAGGGAAGTCATGGTGCTTTTTATGCCTTTGGTACTATTCACTGGAATGCAATTGGCCTTTCAGGTGTGAGT
ATTGCCTGGTTATGGGCAATCGGTGTTTTTGCTGAAATATTATTAATGCGTTTTAATAAAAAATTATTTATCAACTGGTC
AATTAAGCAGATGCTGTTATTAGGTCTTATTGCCGCGATAATTAGGTGGTTGGTCTTTTCCGTTAGTGATGATTTTTATG
TGCTGGCAATTTTTCAAACCTTTCACGCATTAACGTTCGCGGTGACACATTTAGCGGCTATTCGTTATATTAGTTTACAA
AAAAACGCAGAAATGGTCTCTTATCAATCACTCTACTCCGCAGTGGCGTTAGGTTTAATGATGGCAGGATTCACTTATCT
TTCCGGTCTTTTTTATGAAGAGCTACATGGTTATATCTTCTTAATCATGTCTCTATTATTAATGCCTGTTTTTTGGTGTA
TTAAAAGATGGAAAGCTGAATAA

Upstream 100 bases:

>100_bases
ATTTTTAACTTGTTACTGTCAGTTTCCCGCTATGGTGATCTAACATTTTCTTGATTCTCTTGATTCTTTTTATTTCTTTC
TAACCCTTTCGAGGTGCACC

Downstream 100 bases:

>100_bases
GTGACCCCCTTTTTAGTTTTAACACTATTTAATACATTAATGAATTAAATAGTGAACTTCTAAGGTATTTCTTAGACAAA
ACCTTGTTACTACCAAGGTA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MFAIPASFWLSLYFISFFFIWGVFLPFWGIWLSGKGMSSESIGLFFSVGLLLRFVSNLTLLPMVSSAKSTLRLLRILGFF
TVLAFALLLFFNGYMWLAGITLVANFMMGPLAPLGDLIGARLVNQIQLDYGRVRLWGSLSFIVGSTSVGWLIVGLGNDAI
LWSIMGAALIMWLLSLLNLSPQLHDQIDLNLDEKKSLFTLFKRPSVLFFLIIVGSIQGSHGAFYAFGTIHWNAIGLSGVS
IAWLWAIGVFAEILLMRFNKKLFINWSIKQMLLLGLIAAIIRWLVFSVSDDFYVLAIFQTFHALTFAVTHLAAIRYISLQ
KNAEMVSYQSLYSAVALGLMMAGFTYLSGLFYEELHGYIFLIMSLLLMPVFWCIKRWKAE

Sequences:

>Translated_380_residues
MFAIPASFWLSLYFISFFFIWGVFLPFWGIWLSGKGMSSESIGLFFSVGLLLRFVSNLTLLPMVSSAKSTLRLLRILGFF
TVLAFALLLFFNGYMWLAGITLVANFMMGPLAPLGDLIGARLVNQIQLDYGRVRLWGSLSFIVGSTSVGWLIVGLGNDAI
LWSIMGAALIMWLLSLLNLSPQLHDQIDLNLDEKKSLFTLFKRPSVLFFLIIVGSIQGSHGAFYAFGTIHWNAIGLSGVS
IAWLWAIGVFAEILLMRFNKKLFINWSIKQMLLLGLIAAIIRWLVFSVSDDFYVLAIFQTFHALTFAVTHLAAIRYISLQ
KNAEMVSYQSLYSAVALGLMMAGFTYLSGLFYEELHGYIFLIMSLLLMPVFWCIKRWKAE
>Mature_380_residues
MFAIPASFWLSLYFISFFFIWGVFLPFWGIWLSGKGMSSESIGLFFSVGLLLRFVSNLTLLPMVSSAKSTLRLLRILGFF
TVLAFALLLFFNGYMWLAGITLVANFMMGPLAPLGDLIGARLVNQIQLDYGRVRLWGSLSFIVGSTSVGWLIVGLGNDAI
LWSIMGAALIMWLLSLLNLSPQLHDQIDLNLDEKKSLFTLFKRPSVLFFLIIVGSIQGSHGAFYAFGTIHWNAIGLSGVS
IAWLWAIGVFAEILLMRFNKKLFINWSIKQMLLLGLIAAIIRWLVFSVSDDFYVLAIFQTFHALTFAVTHLAAIRYISLQ
KNAEMVSYQSLYSAVALGLMMAGFTYLSGLFYEELHGYIFLIMSLLLMPVFWCIKRWKAE

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=367, Percent_Identity=34.3324250681199, Blast_Score=206, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022814
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF01306 LacY_symp [H]

EC number: NA

Molecular weight: Translated: 42820; Mature: 42820

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAIPASFWLSLYFISFFFIWGVFLPFWGIWLSGKGMSSESIGLFFSVGLLLRFVSNLTL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCHH
LPMVSSAKSTLRLLRILGFFTVLAFALLLFFNGYMWLAGITLVANFMMGPLAPLGDLIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
RLVNQIQLDYGRVRLWGSLSFIVGSTSVGWLIVGLGNDAILWSIMGAALIMWLLSLLNLS
HHHHHHHHCCCCEEEEEEHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PQLHDQIDLNLDEKKSLFTLFKRPSVLFFLIIVGSIQGSHGAFYAFGTIHWNAIGLSGVS
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHH
IAWLWAIGVFAEILLMRFNKKLFINWSIKQMLLLGLIAAIIRWLVFSVSDDFYVLAIFQT
HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FHALTFAVTHLAAIRYISLQKNAEMVSYQSLYSAVALGLMMAGFTYLSGLFYEELHGYIF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIMSLLLMPVFWCIKRWKAE
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFAIPASFWLSLYFISFFFIWGVFLPFWGIWLSGKGMSSESIGLFFSVGLLLRFVSNLTL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCHH
LPMVSSAKSTLRLLRILGFFTVLAFALLLFFNGYMWLAGITLVANFMMGPLAPLGDLIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
RLVNQIQLDYGRVRLWGSLSFIVGSTSVGWLIVGLGNDAILWSIMGAALIMWLLSLLNLS
HHHHHHHHCCCCEEEEEEHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PQLHDQIDLNLDEKKSLFTLFKRPSVLFFLIIVGSIQGSHGAFYAFGTIHWNAIGLSGVS
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHH
IAWLWAIGVFAEILLMRFNKKLFINWSIKQMLLLGLIAAIIRWLVFSVSDDFYVLAIFQT
HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FHALTFAVTHLAAIRYISLQKNAEMVSYQSLYSAVALGLMMAGFTYLSGLFYEELHGYIF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIMSLLLMPVFWCIKRWKAE
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9603882; 9205837; 9278503 [H]