| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944595
Identifier: 119944595
GI number: 119944595
Start: 1042816
End: 1043856
Strand: Reverse
Name: 119944595
Synonym: Ping_0833
Alternate gene names: NA
Gene position: 1043856-1042816 (Counterclockwise)
Preceding gene: 119944601
Following gene: 119944594
Centisome position: 22.89
GC content: 39.19
Gene sequence:
>1041_bases ATGAACATAAATAACCTTAGCGAATTTTTAAAACAATCAAATTGCCAATTTAGTGTTTATGATTTGGGACGTAAAGTTTG CAACATATCCAACAGCTTTTTTAAAGAGATTGAACTTAACCAATTACCTTACCCCTACCCCATTCAGCAGCACGCTTTTA TTGCATTAACGTTTTGGCAAACGGATGCACAAAAAGAACACTTCATTTGGTTTTTAAAAATGCCATTAGATGAGCAGGGT TTATTACAAATCCCCGCACAGATAAGCTTTATCAAAATGGTTGTAGAAGCGCTGGGTGAGGATTTAACCGCAGATGTGAG TGATAAATTACAAGAGCGCATGGCCAGTAACCCGTTTCTATTTAAGCCAAGCACAGAAAAATTGGCTATTTTTAATGCGA TTATGAATGCCCGTTTCATTCGCCCAGCTTCCTCTTTTTATCGCGGTGCACAGCGCTATTTTTCAGGTTCAACAAGCTGG AAAGAGTGGCAAGAACTCGGCATTCAGGGGATTGCCGACTTAACTGCCCGTTTAGATCATGATAATAATCAGCAGAATTT AATTAATGCTCTCCCTTATTTACCACAACAGCCTTTGCAGTCCCTCGCATTGTGTTTAGAGCATCAGAATAAAATAAATC CTGATTTACACCAGGCAATTGCCACACAAATAAGAGTCGAACTGCAGGAAAATCGCCAGGAAAATGCGATTTTATTATTA CGGGCATTGGCAAGTTCCCCCTCTATTGCTATCACCAAAAAATTGATAGAAGAGCAATTTTCTTCGGACTTAATCCATAA CGTACATTGGTATGTGGGTATTGCAGGACGTTTATGGACAGTGCTTGAAGATGAAACCTTACTTAATCGCTTTCTTGAAT CTTTAGCAAATAACCAAGCAGCACTTTTTCCGCAGCTCTTTACAGATATTGTTGCGATTCCTTTATTACGCGAAAAAGTG CTCAGACAAATACGTTTACCAGCACGCTCACCCGCTTTAACAGAAGCGATTGGACGATTATTTTCAGGTAGTCAAAATTA G
Upstream 100 bases:
>100_bases GCTGCAGCCACGGGTTAGCAAAATCATATAAACTCCTAACAATATCAAGTTAGTAATTGATATAATCCAGACACTTTACT AAATAGCAGAACAAATAACT
Downstream 100 bases:
>100_bases GTGGAGTTATAATGGTCGAGCTGCTATTTATTTTATTAACGGTACTTTTGAGCGCTATTATTTGGAAATTACGTAAACAA TCGGAATATGCTCGAGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNINNLSEFLKQSNCQFSVYDLGRKVCNISNSFFKEIELNQLPYPYPIQQHAFIALTFWQTDAQKEHFIWFLKMPLDEQG LLQIPAQISFIKMVVEALGEDLTADVSDKLQERMASNPFLFKPSTEKLAIFNAIMNARFIRPASSFYRGAQRYFSGSTSW KEWQELGIQGIADLTARLDHDNNQQNLINALPYLPQQPLQSLALCLEHQNKINPDLHQAIATQIRVELQENRQENAILLL RALASSPSIAITKKLIEEQFSSDLIHNVHWYVGIAGRLWTVLEDETLLNRFLESLANNQAALFPQLFTDIVAIPLLREKV LRQIRLPARSPALTEAIGRLFSGSQN
Sequences:
>Translated_346_residues MNINNLSEFLKQSNCQFSVYDLGRKVCNISNSFFKEIELNQLPYPYPIQQHAFIALTFWQTDAQKEHFIWFLKMPLDEQG LLQIPAQISFIKMVVEALGEDLTADVSDKLQERMASNPFLFKPSTEKLAIFNAIMNARFIRPASSFYRGAQRYFSGSTSW KEWQELGIQGIADLTARLDHDNNQQNLINALPYLPQQPLQSLALCLEHQNKINPDLHQAIATQIRVELQENRQENAILLL RALASSPSIAITKKLIEEQFSSDLIHNVHWYVGIAGRLWTVLEDETLLNRFLESLANNQAALFPQLFTDIVAIPLLREKV LRQIRLPARSPALTEAIGRLFSGSQN >Mature_346_residues MNINNLSEFLKQSNCQFSVYDLGRKVCNISNSFFKEIELNQLPYPYPIQQHAFIALTFWQTDAQKEHFIWFLKMPLDEQG LLQIPAQISFIKMVVEALGEDLTADVSDKLQERMASNPFLFKPSTEKLAIFNAIMNARFIRPASSFYRGAQRYFSGSTSW KEWQELGIQGIADLTARLDHDNNQQNLINALPYLPQQPLQSLALCLEHQNKINPDLHQAIATQIRVELQENRQENAILLL RALASSPSIAITKKLIEEQFSSDLIHNVHWYVGIAGRLWTVLEDETLLNRFLESLANNQAALFPQLFTDIVAIPLLREKV LRQIRLPARSPALTEAIGRLFSGSQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39565; Mature: 39565
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINNLSEFLKQSNCQFSVYDLGRKVCNISNSFFKEIELNQLPYPYPIQQHAFIALTFWQ CCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC TDAQKEHFIWFLKMPLDEQGLLQIPAQISFIKMVVEALGEDLTADVSDKLQERMASNPFL CCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEE FKPSTEKLAIFNAIMNARFIRPASSFYRGAQRYFSGSTSWKEWQELGIQGIADLTARLDH ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCC DNNQQNLINALPYLPQQPLQSLALCLEHQNKINPDLHQAIATQIRVELQENRQENAILLL CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH RALASSPSIAITKKLIEEQFSSDLIHNVHWYVGIAGRLWTVLEDETLLNRFLESLANNQA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCH ALFPQLFTDIVAIPLLREKVLRQIRLPARSPALTEAIGRLFSGSQN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNINNLSEFLKQSNCQFSVYDLGRKVCNISNSFFKEIELNQLPYPYPIQQHAFIALTFWQ CCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC TDAQKEHFIWFLKMPLDEQGLLQIPAQISFIKMVVEALGEDLTADVSDKLQERMASNPFL CCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEE FKPSTEKLAIFNAIMNARFIRPASSFYRGAQRYFSGSTSWKEWQELGIQGIADLTARLDH ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCC DNNQQNLINALPYLPQQPLQSLALCLEHQNKINPDLHQAIATQIRVELQENRQENAILLL CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH RALASSPSIAITKKLIEEQFSSDLIHNVHWYVGIAGRLWTVLEDETLLNRFLESLANNQA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCH ALFPQLFTDIVAIPLLREKVLRQIRLPARSPALTEAIGRLFSGSQN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA