Click here to switch to the map view.

The map label for this gene is 119944592

Identifier: 119944592

GI number: 119944592

Start: 1041370

End: 1042146

Strand: Reverse

Name: 119944592

Synonym: Ping_0830

Alternate gene names: NA

Gene position: 1042146-1041370 (Counterclockwise)

Preceding gene: 119944593

Following gene: 119944591

Centisome position: 22.86

GC content: 40.28

Gene sequence:

>777_bases
GTGTTTATTAAAGAGATAACTTTTGAGTGTTATAAAAATACCCAGTACGCAGCCGTTGAAAAAGCCATTAATAACTACTT
TGATATGTTACGCTATAATGGACAAATTCTGGGTCGTGAATTTCCGATCGCCATGTTTGAGGCTTGGTTTGTCTCAAGCT
TGGTCTGCCCGGAAGAAAACAGTTTAAATGATATTTTTAATAGCCCGCAAGTAAAGCAGGCATTACAGGGTTTAACAGAA
GCTGGATTACTTTCACCTAAAATCAAAAATATTGCTGAAGATTTAAACTCTTTGTGCTGCGCAGAGAAATTTCAACCAAG
TTGGCAGCTTTTATACACAACTTTTTTAGATACCTGCTCCCCACTGCGCTGCGGTGAAAGCCTCGCCCCTATTCCGCTCT
ATCGAACGCCCGAAGCAATTAGTAATGGAGATCGTAAAGCCATTCTAAAATGGCAGGAAGAGTGGATTAATTGCGATGAA
CTGCAAATGAACGGTTCAGCGGTTTCGAGCGTTGCTTTAAAAGAGATTGGCGAGATCGGCAGCAGACTATTTTATCGCGG
CACTAATTTATGTGAGCGCATTGAAGAGATTACTAAAGTACCAACCTATTATTACCTATACCGTGTTGCCGGTAACAGTT
TAATAGCAGAACAGGAGCGAAAATGCCCCGCTTGTGGGGGAGATTGGAAACTAGCTGCGCCATTATTTGATATCTTTGAT
TTCAAATGTGAGCCATGTAAACTATTGTCAAACATATCTTGGGATTTCAAAAAATAA

Upstream 100 bases:

>100_bases
TTAATCAAGCCATTGCGCCTTTAATAAAACAGGTTGAGTTGTTAACTAAACAACTTGTTGATTTAAAAAAACAACTTAAA
ATACAAGAAAAAGAGTAGCC

Downstream 100 bases:

>100_bases
GGGAAAAATAATGGTAAAAAAAATAAAGTTTTTCGGCGCGATCGGTATCATTCTTGTTATCACTTTTTTCGTTTTATACA
GCTGCTCCAGAGATGAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MFIKEITFECYKNTQYAAVEKAINNYFDMLRYNGQILGREFPIAMFEAWFVSSLVCPEENSLNDIFNSPQVKQALQGLTE
AGLLSPKIKNIAEDLNSLCCAEKFQPSWQLLYTTFLDTCSPLRCGESLAPIPLYRTPEAISNGDRKAILKWQEEWINCDE
LQMNGSAVSSVALKEIGEIGSRLFYRGTNLCERIEEITKVPTYYYLYRVAGNSLIAEQERKCPACGGDWKLAAPLFDIFD
FKCEPCKLLSNISWDFKK

Sequences:

>Translated_258_residues
MFIKEITFECYKNTQYAAVEKAINNYFDMLRYNGQILGREFPIAMFEAWFVSSLVCPEENSLNDIFNSPQVKQALQGLTE
AGLLSPKIKNIAEDLNSLCCAEKFQPSWQLLYTTFLDTCSPLRCGESLAPIPLYRTPEAISNGDRKAILKWQEEWINCDE
LQMNGSAVSSVALKEIGEIGSRLFYRGTNLCERIEEITKVPTYYYLYRVAGNSLIAEQERKCPACGGDWKLAAPLFDIFD
FKCEPCKLLSNISWDFKK
>Mature_258_residues
MFIKEITFECYKNTQYAAVEKAINNYFDMLRYNGQILGREFPIAMFEAWFVSSLVCPEENSLNDIFNSPQVKQALQGLTE
AGLLSPKIKNIAEDLNSLCCAEKFQPSWQLLYTTFLDTCSPLRCGESLAPIPLYRTPEAISNGDRKAILKWQEEWINCDE
LQMNGSAVSSVALKEIGEIGSRLFYRGTNLCERIEEITKVPTYYYLYRVAGNSLIAEQERKCPACGGDWKLAAPLFDIFD
FKCEPCKLLSNISWDFKK

Specific function: Unknown

COG id: COG5595

COG function: function code R; Zn-ribbon-containing, possibly nucleic-acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016908 [H]

Pfam domain/function: PF10071 DUF2310 [H]

EC number: NA

Molecular weight: Translated: 29452; Mature: 29452

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIKEITFECYKNTQYAAVEKAINNYFDMLRYNGQILGREFPIAMFEAWFVSSLVCPEEN
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCC
SLNDIFNSPQVKQALQGLTEAGLLSPKIKNIAEDLNSLCCAEKFQPSWQLLYTTFLDTCS
CHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PLRCGESLAPIPLYRTPEAISNGDRKAILKWQEEWINCDELQMNGSAVSSVALKEIGEIG
CHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH
SRLFYRGTNLCERIEEITKVPTYYYLYRVAGNSLIAEQERKCPACGGDWKLAAPLFDIFD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHC
FKCEPCKLLSNISWDFKK
CCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MFIKEITFECYKNTQYAAVEKAINNYFDMLRYNGQILGREFPIAMFEAWFVSSLVCPEEN
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCC
SLNDIFNSPQVKQALQGLTEAGLLSPKIKNIAEDLNSLCCAEKFQPSWQLLYTTFLDTCS
CHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PLRCGESLAPIPLYRTPEAISNGDRKAILKWQEEWINCDELQMNGSAVSSVALKEIGEIG
CHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH
SRLFYRGTNLCERIEEITKVPTYYYLYRVAGNSLIAEQERKCPACGGDWKLAAPLFDIFD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHC
FKCEPCKLLSNISWDFKK
CCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]