| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119944566
Identifier: 119944566
GI number: 119944566
Start: 1004655
End: 1005044
Strand: Reverse
Name: 119944566
Synonym: Ping_0803
Alternate gene names: NA
Gene position: 1005044-1004655 (Counterclockwise)
Preceding gene: 119944567
Following gene: 119944565
Centisome position: 22.04
GC content: 42.05
Gene sequence:
>390_bases ATGAACAAAGTCATTGCATTTTTTTTTCTACTGATATCTCTAAATACTCAGGCACAGGGAAATTCCGGTTTTAACAGTGA AATAAGCCATTTTGCAGGCGGAGCTGTTTCAACTGCTGCTGCCGTCGTGATAATAGATAAATATTTTCCTGAACAAAACA GCGCCTGGGTGGGATTTGCACTGAGCAGCACAGTAGATGCATTACTTGAATATCGTCAATATCAGTTAGGTGATAACTCC GCAAGTGCAGCCCTGCTCGATGCCTCATCACATGCATTAGGCGCTGCCGTAGGTGCCTATCTTACGGGTAAATACATTAT CACCCCCACCGTCGCATTAGATGCGAATAACAATTTTTATACCGGCATTAATATTGCCTTCGATTTTTAA
Upstream 100 bases:
>100_bases CGCAACAAAGCCTAACAGGTTGTACTAAAATAATAATATGCAATTTTTAATCATGTAATCAGTAATCACCTTAAAGCACA CTTACCCGAATGGAGGCACT
Downstream 100 bases:
>100_bases ATCAAACCTTAAGTAATAGTCGATCTCATCCCCCGAAAAAATATAAAAGCGAGAGATCTCGTTTTTATGTCCCTTTCATC ATCATCCATCGCTTGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MNKVIAFFFLLISLNTQAQGNSGFNSEISHFAGGAVSTAAAVVIIDKYFPEQNSAWVGFALSSTVDALLEYRQYQLGDNS ASAALLDASSHALGAAVGAYLTGKYIITPTVALDANNNFYTGINIAFDF
Sequences:
>Translated_129_residues MNKVIAFFFLLISLNTQAQGNSGFNSEISHFAGGAVSTAAAVVIIDKYFPEQNSAWVGFALSSTVDALLEYRQYQLGDNS ASAALLDASSHALGAAVGAYLTGKYIITPTVALDANNNFYTGINIAFDF >Mature_129_residues MNKVIAFFFLLISLNTQAQGNSGFNSEISHFAGGAVSTAAAVVIIDKYFPEQNSAWVGFALSSTVDALLEYRQYQLGDNS ASAALLDASSHALGAAVGAYLTGKYIITPTVALDANNNFYTGINIAFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13640; Mature: 13640
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVIAFFFLLISLNTQAQGNSGFNSEISHFAGGAVSTAAAVVIIDKYFPEQNSAWVGFA CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHEEEEEEEECCCCCCCCEEEEE LSSTVDALLEYRQYQLGDNSASAALLDASSHALGAAVGAYLTGKYIITPTVALDANNNFY HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCEE TGINIAFDF EEEEEEEEC >Mature Secondary Structure MNKVIAFFFLLISLNTQAQGNSGFNSEISHFAGGAVSTAAAVVIIDKYFPEQNSAWVGFA CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHEEEEEEEECCCCCCCCEEEEE LSSTVDALLEYRQYQLGDNSASAALLDASSHALGAAVGAYLTGKYIITPTVALDANNNFY HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCEE TGINIAFDF EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA