| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is wbjE [H]
Identifier: 119944555
GI number: 119944555
Start: 992014
End: 993213
Strand: Direct
Name: wbjE [H]
Synonym: Ping_0792
Alternate gene names: 119944555
Gene position: 992014-993213 (Clockwise)
Preceding gene: 119944554
Following gene: 119944556
Centisome position: 21.76
GC content: 34.92
Gene sequence:
>1200_bases ATGCGCTTAGCTTTATTGATTGATGATTACATGCCTGATAGTACCCGTGTAGGGGCTAAAATGTTTCATGAGTTAGCTTG TGAGTTTGTGAAATGTGGACATGAGGTTGTTGTTATAACCCCTGGCATTAATCAAAAGAATCCTTTAGAAAAAAGTGACC TTGATGGGGTTGCCGTCTGGAAATTTAACAGCGGTCCAATAAAAGATATTGGAAAAATAAAGCGTGCGATCAATGAAACG ATGCTTTCTACCCGTGCTTGGAATGCAATTAAATCAGAGCTGAACTCGAGTTTTTTTGATGGCATAGTGTATTACTCGCC TTCTATTTTCTTTTCCCGTCTTGTAACAAAGCTAAAAAAGACTTGTGGTTGTGCGTCTTATTTGGTGCTGCGCGACTTGT TTCCACAGTGGGCAGTTGATGAAGGGCTAATGAAAGAAGGCTCTTTAATTGAAAAATATTTTCGCTTTTTTGAGAAATTA AATTATAAAGCAGCTAACCATATTGGCTTAATGTCTCAGAATAACCTTACCTTGTTTAACAATAGAACTGACAATCTTTA TCAAACAAATATTTTAAGAAATTGGGCTGCATTTTCCCCATTTAATTTTCAAGATGCTGATTTTAGTTATAGGGAAAAAT TAAATATTAACAATAAAACCATTTATTTTTATGGTGGTAATATTGGTCATGCCCAAGATATGGAAAATTTAATGCGTTTA GCGCGTGACATGCAATCATATGCTCAAGCGCATTTCTTGTTTGTTGGACAGGGCGATGAAGTTGAGTTAATTAATAAACT TGCTGCGGACTGGAAATTAGATAATTTCACTTATTTACCTTCAGTAAATCAGGAAGAATTTAAACATTTATTATCTGAAG TCGACGTGGGCTTGTTTTCTTTAGCTCATAGCCACACAGCCCATAACTTCCCTGGAAAATTACTTGGTTATATGGTCGAG TCATTACCTATTTTAGGAAGTGTTAATCCAGGTAATGATCTGCTTGATATTGTTCGAGAATATGATGCCGGTGATATATT TATTAATGGTGATGATAAGAATCTGTTTGAAGCCGCTATCACCTATTTAGATGATGAATATCGTAATAACAAAGGTAATA ATGCGACTGCATTATTACATAAAGAATTTACAGTTGAGTCTGCCGCTAAAGATATAGTTAATATATTTAGTCATAGATAG
Upstream 100 bases:
>100_bases TATGTTAATAAATTTGTTTGGAAAAAATAATTAACGTCAATTAAAGTAGATGAAATTATTTTGTTTCATCTACTTTCTCC TCCTTATTGGAAATTATTAA
Downstream 100 bases:
>100_bases GTTAATAAGCAACTAATTTTAAATCTATAAATTTTCTTTGAAATTTATTTCTACTCTTAAAAAATGTTAAAGTAGAAAGT GTATTCTCAATTGTGCTTTA
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVWKFNSGPIKDIGKIKRAINET MLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKKTCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKL NYKAANHIGLMSQNNLTLFNNRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFSLAHSHTAHNFPGKLLGYMVE SLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAITYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR
Sequences:
>Translated_399_residues MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVWKFNSGPIKDIGKIKRAINET MLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKKTCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKL NYKAANHIGLMSQNNLTLFNNRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFSLAHSHTAHNFPGKLLGYMVE SLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAITYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR >Mature_399_residues MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVWKFNSGPIKDIGKIKRAINET MLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKKTCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKL NYKAANHIGLMSQNNLTLFNNRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFSLAHSHTAHNFPGKLLGYMVE SLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAITYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45449; Mature: 45449
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVW CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEE KFNSGPIKDIGKIKRAINETMLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH TCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKLNYKAANHIGLMSQNNLTLFN HHCHHHHHHHHHHCHHHHHCHHHHCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCEEEEE NRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFS HHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH LAHSHTAHNFPGKLLGYMVESLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAI HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHH TYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVW CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEE KFNSGPIKDIGKIKRAINETMLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH TCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKLNYKAANHIGLMSQNNLTLFN HHCHHHHHHHHHHCHHHHHCHHHHCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCEEEEE NRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFS HHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH LAHSHTAHNFPGKLLGYMVESLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAI HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHH TYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400585; 10828401; 12057956 [H]