Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is wbjE [H]

Identifier: 119944555

GI number: 119944555

Start: 992014

End: 993213

Strand: Direct

Name: wbjE [H]

Synonym: Ping_0792

Alternate gene names: 119944555

Gene position: 992014-993213 (Clockwise)

Preceding gene: 119944554

Following gene: 119944556

Centisome position: 21.76

GC content: 34.92

Gene sequence:

>1200_bases
ATGCGCTTAGCTTTATTGATTGATGATTACATGCCTGATAGTACCCGTGTAGGGGCTAAAATGTTTCATGAGTTAGCTTG
TGAGTTTGTGAAATGTGGACATGAGGTTGTTGTTATAACCCCTGGCATTAATCAAAAGAATCCTTTAGAAAAAAGTGACC
TTGATGGGGTTGCCGTCTGGAAATTTAACAGCGGTCCAATAAAAGATATTGGAAAAATAAAGCGTGCGATCAATGAAACG
ATGCTTTCTACCCGTGCTTGGAATGCAATTAAATCAGAGCTGAACTCGAGTTTTTTTGATGGCATAGTGTATTACTCGCC
TTCTATTTTCTTTTCCCGTCTTGTAACAAAGCTAAAAAAGACTTGTGGTTGTGCGTCTTATTTGGTGCTGCGCGACTTGT
TTCCACAGTGGGCAGTTGATGAAGGGCTAATGAAAGAAGGCTCTTTAATTGAAAAATATTTTCGCTTTTTTGAGAAATTA
AATTATAAAGCAGCTAACCATATTGGCTTAATGTCTCAGAATAACCTTACCTTGTTTAACAATAGAACTGACAATCTTTA
TCAAACAAATATTTTAAGAAATTGGGCTGCATTTTCCCCATTTAATTTTCAAGATGCTGATTTTAGTTATAGGGAAAAAT
TAAATATTAACAATAAAACCATTTATTTTTATGGTGGTAATATTGGTCATGCCCAAGATATGGAAAATTTAATGCGTTTA
GCGCGTGACATGCAATCATATGCTCAAGCGCATTTCTTGTTTGTTGGACAGGGCGATGAAGTTGAGTTAATTAATAAACT
TGCTGCGGACTGGAAATTAGATAATTTCACTTATTTACCTTCAGTAAATCAGGAAGAATTTAAACATTTATTATCTGAAG
TCGACGTGGGCTTGTTTTCTTTAGCTCATAGCCACACAGCCCATAACTTCCCTGGAAAATTACTTGGTTATATGGTCGAG
TCATTACCTATTTTAGGAAGTGTTAATCCAGGTAATGATCTGCTTGATATTGTTCGAGAATATGATGCCGGTGATATATT
TATTAATGGTGATGATAAGAATCTGTTTGAAGCCGCTATCACCTATTTAGATGATGAATATCGTAATAACAAAGGTAATA
ATGCGACTGCATTATTACATAAAGAATTTACAGTTGAGTCTGCCGCTAAAGATATAGTTAATATATTTAGTCATAGATAG

Upstream 100 bases:

>100_bases
TATGTTAATAAATTTGTTTGGAAAAAATAATTAACGTCAATTAAAGTAGATGAAATTATTTTGTTTCATCTACTTTCTCC
TCCTTATTGGAAATTATTAA

Downstream 100 bases:

>100_bases
GTTAATAAGCAACTAATTTTAAATCTATAAATTTTCTTTGAAATTTATTTCTACTCTTAAAAAATGTTAAAGTAGAAAGT
GTATTCTCAATTGTGCTTTA

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVWKFNSGPIKDIGKIKRAINET
MLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKKTCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKL
NYKAANHIGLMSQNNLTLFNNRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL
ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFSLAHSHTAHNFPGKLLGYMVE
SLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAITYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR

Sequences:

>Translated_399_residues
MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVWKFNSGPIKDIGKIKRAINET
MLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKKTCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKL
NYKAANHIGLMSQNNLTLFNNRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL
ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFSLAHSHTAHNFPGKLLGYMVE
SLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAITYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR
>Mature_399_residues
MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVWKFNSGPIKDIGKIKRAINET
MLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKKTCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKL
NYKAANHIGLMSQNNLTLFNNRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL
ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFSLAHSHTAHNFPGKLLGYMVE
SLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAITYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45449; Mature: 45449

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVW
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEE
KFNSGPIKDIGKIKRAINETMLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKK
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
TCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKLNYKAANHIGLMSQNNLTLFN
HHCHHHHHHHHHHCHHHHHCHHHHCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCEEEEE
NRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFS
HHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
LAHSHTAHNFPGKLLGYMVESLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAI
HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHH
TYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLALLIDDYMPDSTRVGAKMFHELACEFVKCGHEVVVITPGINQKNPLEKSDLDGVAVW
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEE
KFNSGPIKDIGKIKRAINETMLSTRAWNAIKSELNSSFFDGIVYYSPSIFFSRLVTKLKK
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
TCGCASYLVLRDLFPQWAVDEGLMKEGSLIEKYFRFFEKLNYKAANHIGLMSQNNLTLFN
HHCHHHHHHHHHHCHHHHHCHHHHCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCEEEEE
NRTDNLYQTNILRNWAAFSPFNFQDADFSYREKLNINNKTIYFYGGNIGHAQDMENLMRL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
ARDMQSYAQAHFLFVGQGDEVELINKLAADWKLDNFTYLPSVNQEEFKHLLSEVDVGLFS
HHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
LAHSHTAHNFPGKLLGYMVESLPILGSVNPGNDLLDIVREYDAGDIFINGDDKNLFEAAI
HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHH
TYLDDEYRNNKGNNATALLHKEFTVESAAKDIVNIFSHR
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10400585; 10828401; 12057956 [H]