| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944547
Identifier: 119944547
GI number: 119944547
Start: 983939
End: 984697
Strand: Direct
Name: 119944547
Synonym: Ping_0783
Alternate gene names: NA
Gene position: 983939-984697 (Clockwise)
Preceding gene: 119944546
Following gene: 119944548
Centisome position: 21.58
GC content: 28.59
Gene sequence:
>759_bases GTGGATGTTGAAATAATTAAATATATAACACCTTTAAATAATGAGATTATTGAAAGTTTATTATTTTTAGGAGAAGAAAA CTGCTTTAAATTTAGAGTCGACGAATTCACAAAGCCTGGCTCAACAATTTTTATTGCTTGGTCTAAAGGGAAAGCTGTTG CTTCTAGGAGGTTTTTAAAAAGTACCTTCATCAATAAAGTAAGTAAAAAAACAATAATGGGTTTACAGTGTTGTGAAACT ATAACCGACGATAAATATCGGGGAAGAGGCTTGTTTGGTAAAATTTGGGAACGGGCATTAAAAGAATGTAAAAGTGATGT TGATTTATTTTATAATTTTCCGAATGATGTCTCATTCAAACCATATATCAAATCAGGATTCAAATTATTAGACTATATGA TTGTATTTTATAATGTGCAAAATATAGCCGTTGCCGATACTTATAGGGATTTTTTTTTCGATGAAAATAACATGATAAAT AATACAGAAGGTGATTACTCTAGTGTTAAATTAACTAACGGAATTCATAAATTTTTTCCTATTCAAGTGCTAAAAGGTAA TAAATTAATAAGTACTAATGTTCCGAAGTATCACTTTTTTGGTTGTAATTTAAATGCTCTTCGTAAAGTTCATCAATTGA ATTTTGTTAAAGCGCCATTGTTTACCTTGAGGCCAATAACTTTTTTCCAAGTAAATGATGATATTGATGTAAATAACTTA TATTTAACACCAGGTAGCTATGATACAACACAAAAATAA
Upstream 100 bases:
>100_bases TTTTACACCTGCTATAGGTTCTCGTTCAGTCTGTGTCATTATTTGTTGAATTAGCAATAAAAAATATATAAATTAAATTT ATACTGATAGGAGTGCTGGC
Downstream 100 bases:
>100_bases ATTGATATATATCAATGCACATTCGTTATACAGTTTAAGTACTGATAGGGTTGAGTTAGAAAAGTGGTTCCGTAACCTTT ATATTTTATTGTCTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MDVEIIKYITPLNNEIIESLLFLGEENCFKFRVDEFTKPGSTIFIAWSKGKAVASRRFLKSTFINKVSKKTIMGLQCCET ITDDKYRGRGLFGKIWERALKECKSDVDLFYNFPNDVSFKPYIKSGFKLLDYMIVFYNVQNIAVADTYRDFFFDENNMIN NTEGDYSSVKLTNGIHKFFPIQVLKGNKLISTNVPKYHFFGCNLNALRKVHQLNFVKAPLFTLRPITFFQVNDDIDVNNL YLTPGSYDTTQK
Sequences:
>Translated_252_residues MDVEIIKYITPLNNEIIESLLFLGEENCFKFRVDEFTKPGSTIFIAWSKGKAVASRRFLKSTFINKVSKKTIMGLQCCET ITDDKYRGRGLFGKIWERALKECKSDVDLFYNFPNDVSFKPYIKSGFKLLDYMIVFYNVQNIAVADTYRDFFFDENNMIN NTEGDYSSVKLTNGIHKFFPIQVLKGNKLISTNVPKYHFFGCNLNALRKVHQLNFVKAPLFTLRPITFFQVNDDIDVNNL YLTPGSYDTTQK >Mature_252_residues MDVEIIKYITPLNNEIIESLLFLGEENCFKFRVDEFTKPGSTIFIAWSKGKAVASRRFLKSTFINKVSKKTIMGLQCCET ITDDKYRGRGLFGKIWERALKECKSDVDLFYNFPNDVSFKPYIKSGFKLLDYMIVFYNVQNIAVADTYRDFFFDENNMIN NTEGDYSSVKLTNGIHKFFPIQVLKGNKLISTNVPKYHFFGCNLNALRKVHQLNFVKAPLFTLRPITFFQVNDDIDVNNL YLTPGSYDTTQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29238; Mature: 29238
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVEIIKYITPLNNEIIESLLFLGEENCFKFRVDEFTKPGSTIFIAWSKGKAVASRRFLK CCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHH STFINKVSKKTIMGLQCCETITDDKYRGRGLFGKIWERALKECKSDVDLFYNFPNDVSFK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC PYIKSGFKLLDYMIVFYNVQNIAVADTYRDFFFDENNMINNTEGDYSSVKLTNGIHKFFP HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHEE IQVLKGNKLISTNVPKYHFFGCNLNALRKVHQLNFVKAPLFTLRPITFFQVNDDIDVNNL EEEEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCEE YLTPGSYDTTQK EECCCCCCCCCC >Mature Secondary Structure MDVEIIKYITPLNNEIIESLLFLGEENCFKFRVDEFTKPGSTIFIAWSKGKAVASRRFLK CCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHH STFINKVSKKTIMGLQCCETITDDKYRGRGLFGKIWERALKECKSDVDLFYNFPNDVSFK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC PYIKSGFKLLDYMIVFYNVQNIAVADTYRDFFFDENNMINNTEGDYSSVKLTNGIHKFFP HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHEE IQVLKGNKLISTNVPKYHFFGCNLNALRKVHQLNFVKAPLFTLRPITFFQVNDDIDVNNL EEEEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCEE YLTPGSYDTTQK EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA