| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is manB [H]
Identifier: 119944535
GI number: 119944535
Start: 967497
End: 968924
Strand: Direct
Name: manB [H]
Synonym: Ping_0769
Alternate gene names: 119944535
Gene position: 967497-968924 (Clockwise)
Preceding gene: 119944534
Following gene: 119944536
Centisome position: 21.22
GC content: 40.9
Gene sequence:
>1428_bases ATGAACAAAAAATTAATTAGCGCAACGGTTATCGCAGAAAGTGGTATTGCATTTGGCACTAGTGGTGCACGTGGTTTAGT GACTCAACTCACCCCTGATGTCTGTGCCGCCTTTGCCGTTGCATTTATTGCGGGTATGACGCGCAACTTTAATTTTAAGC AAGTTGCGATTGCAATTGACAACCGCCCGAGCAGTTATGCGATGGCAAAAGCTTGTGCCGCTGCTTTGCAACAGTTAGAG ATTGATGTTGTCTATTATGGTGTTATTCCAACGCCTGCGTTAGCTTACGTGGCTCAAGAATATGTTATTCCAGCCATTAT GGTTACCGGCAGCCATATTCCTTTTGATCGTAACGGGCTTAAATTTTACCGTCCTGATGGCGAAATCAGTAAAGTTGACG AGCAAGCTATTCTGACTGAGCAAGTTGAGTTTGCAGCGCTTGCTGAGCTACCTGAATTAGTTATTAATCATCGCGCTGCT GAAGAATACATTACCCGTTATACCTCTTTATTTACTAGCCCTTGGCTTACTGGCAAACGCATTGGTATTTATGAGCATTC CAGTGCCGGTCGCGATCTTTACTACCGTATTTTTGAAAAACTGGGTGCGGAAGTGATTGCGCTAGAGCGTAGTGATAAGT TTGTGCCTATTGATACTGAAGCTGTTTCTGTTGAAGATACATTAAAAGCAATTAACTGGTCTAAAGAATATAATTTAGAT GTTGTTTTTTCAACCGATGGTGATGGCGACCGCCCATTAGTATCCGATGAAAATGGGAACTGGCTGCGTGGGGATATTCT CGGTTTATTAAGTGCTGAAGCATTAAATATTGAGGCGTTAGCTGTCCCTGTCAGCTGTAATACAGCGATTGAAAGCTGTA ATAAATTTAAACATGTAGAGCGAACCAAAATTGGATCTCCTTATGTGATTGCTGAGTTTGCTAACTTAGCGGCTAAATTT AATGCAGTCGCAGGCTTTGAAGCCAATGGAGGTTTTCTGCTGGGCAGTGATGTGCAATTAAACGGTCAAATATTAAAAGC ATTGCCGACGCGTGATGCTGTTCTGCCTGCAATTATGTTGCTAGCTGCAGCAGGCGAAGGAGTTATTTCAACATTAGTAA ATGCATTACCGCAACGTTTTACCTACAGTGATCGCATTCAAAATTTTGCGACTGAAAAAAGTCAGACGATTATTGCACAA GGCAAAAATGATCCGGCAAATTTATTAATGCAGTTGGGTTTTGATAATGTTGAAATTAAAAATGTTGATGAAACAGATGG TTTAAGAATAACATTAACAGACGAGCGAATTATTCATCTGCGACCGTCAGGTAATGCCCCGGAACTGCGTTGTTATGCAG AAGCTGATAGTTACTCAAAAGCGCATGAGTTAGTAAATAACTCTTTAATAAACATACAAAAAATTTAA
Upstream 100 bases:
>100_bases GGAAAGCTTAACAAGTATTGTCATTTTTCTCCGTGTGCGAAGCCTCTGTGTTCTCGGTGGTGAATTGTTTTTACCAGACC CTGAATAATTTGGAAATATT
Downstream 100 bases:
>100_bases ACTCACAAAGAGAAAGAAATGAGGTCTTTACATGTTTAAAGGTGTTGTTGTGGTTTCCTCCTTCTTTGCTCATTCATCTC TCTTTGTAAATAATGTTTTA
Product: phosphoglucomutase/phosphomannomutase alpha/beta/subunit
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MNKKLISATVIAESGIAFGTSGARGLVTQLTPDVCAAFAVAFIAGMTRNFNFKQVAIAIDNRPSSYAMAKACAAALQQLE IDVVYYGVIPTPALAYVAQEYVIPAIMVTGSHIPFDRNGLKFYRPDGEISKVDEQAILTEQVEFAALAELPELVINHRAA EEYITRYTSLFTSPWLTGKRIGIYEHSSAGRDLYYRIFEKLGAEVIALERSDKFVPIDTEAVSVEDTLKAINWSKEYNLD VVFSTDGDGDRPLVSDENGNWLRGDILGLLSAEALNIEALAVPVSCNTAIESCNKFKHVERTKIGSPYVIAEFANLAAKF NAVAGFEANGGFLLGSDVQLNGQILKALPTRDAVLPAIMLLAAAGEGVISTLVNALPQRFTYSDRIQNFATEKSQTIIAQ GKNDPANLLMQLGFDNVEIKNVDETDGLRITLTDERIIHLRPSGNAPELRCYAEADSYSKAHELVNNSLINIQKI
Sequences:
>Translated_475_residues MNKKLISATVIAESGIAFGTSGARGLVTQLTPDVCAAFAVAFIAGMTRNFNFKQVAIAIDNRPSSYAMAKACAAALQQLE IDVVYYGVIPTPALAYVAQEYVIPAIMVTGSHIPFDRNGLKFYRPDGEISKVDEQAILTEQVEFAALAELPELVINHRAA EEYITRYTSLFTSPWLTGKRIGIYEHSSAGRDLYYRIFEKLGAEVIALERSDKFVPIDTEAVSVEDTLKAINWSKEYNLD VVFSTDGDGDRPLVSDENGNWLRGDILGLLSAEALNIEALAVPVSCNTAIESCNKFKHVERTKIGSPYVIAEFANLAAKF NAVAGFEANGGFLLGSDVQLNGQILKALPTRDAVLPAIMLLAAAGEGVISTLVNALPQRFTYSDRIQNFATEKSQTIIAQ GKNDPANLLMQLGFDNVEIKNVDETDGLRITLTDERIIHLRPSGNAPELRCYAEADSYSKAHELVNNSLINIQKI >Mature_475_residues MNKKLISATVIAESGIAFGTSGARGLVTQLTPDVCAAFAVAFIAGMTRNFNFKQVAIAIDNRPSSYAMAKACAAALQQLE IDVVYYGVIPTPALAYVAQEYVIPAIMVTGSHIPFDRNGLKFYRPDGEISKVDEQAILTEQVEFAALAELPELVINHRAA EEYITRYTSLFTSPWLTGKRIGIYEHSSAGRDLYYRIFEKLGAEVIALERSDKFVPIDTEAVSVEDTLKAINWSKEYNLD VVFSTDGDGDRPLVSDENGNWLRGDILGLLSAEALNIEALAVPVSCNTAIESCNKFKHVERTKIGSPYVIAEFANLAAKF NAVAGFEANGGFLLGSDVQLNGQILKALPTRDAVLPAIMLLAAAGEGVISTLVNALPQRFTYSDRIQNFATEKSQTIIAQ GKNDPANLLMQLGFDNVEIKNVDETDGLRITLTDERIIHLRPSGNAPELRCYAEADSYSKAHELVNNSLINIQKI
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group C2 O antigen [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=362, Percent_Identity=27.6243093922652, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 51791; Mature: 51791
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLISATVIAESGIAFGTSGARGLVTQLTPDVCAAFAVAFIAGMTRNFNFKQVAIAID CCCCEEEEEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC NRPSSYAMAKACAAALQQLEIDVVYYGVIPTPALAYVAQEYVIPAIMVTGSHIPFDRNGL CCCCHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCC KFYRPDGEISKVDEQAILTEQVEFAALAELPELVINHRAAEEYITRYTSLFTSPWLTGKR EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE IGIYEHSSAGRDLYYRIFEKLGAEVIALERSDKFVPIDTEAVSVEDTLKAINWSKEYNLD EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCEECHHHHHHHHCCCCCCCEE VVFSTDGDGDRPLVSDENGNWLRGDILGLLSAEALNIEALAVPVSCNTAIESCNKFKHVE EEEECCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHH RTKIGSPYVIAEFANLAAKFNAVAGFEANGGFLLGSDVQLNGQILKALPTRDAVLPAIML HHCCCCCEEHHHHHHHHHHHHHEECEECCCCEEEECCEEECCHHEEECCCCHHHHHHHHH LAAAGEGVISTLVNALPQRFTYSDRIQNFATEKSQTIIAQGKNDPANLLMQLGFDNVEIK HHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCEEEE NVDETDGLRITLTDERIIHLRPSGNAPELRCYAEADSYSKAHELVNNSLINIQKI CCCCCCCEEEEEECCEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MNKKLISATVIAESGIAFGTSGARGLVTQLTPDVCAAFAVAFIAGMTRNFNFKQVAIAID CCCCEEEEEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC NRPSSYAMAKACAAALQQLEIDVVYYGVIPTPALAYVAQEYVIPAIMVTGSHIPFDRNGL CCCCHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCC KFYRPDGEISKVDEQAILTEQVEFAALAELPELVINHRAAEEYITRYTSLFTSPWLTGKR EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE IGIYEHSSAGRDLYYRIFEKLGAEVIALERSDKFVPIDTEAVSVEDTLKAINWSKEYNLD EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCEECHHHHHHHHCCCCCCCEE VVFSTDGDGDRPLVSDENGNWLRGDILGLLSAEALNIEALAVPVSCNTAIESCNKFKHVE EEEECCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHH RTKIGSPYVIAEFANLAAKFNAVAGFEANGGFLLGSDVQLNGQILKALPTRDAVLPAIML HHCCCCCEEHHHHHHHHHHHHHEECEECCCCEEEECCEEECCHHEEECCCCHHHHHHHHH LAAAGEGVISTLVNALPQRFTYSDRIQNFATEKSQTIIAQGKNDPANLLMQLGFDNVEIK HHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCEEEE NVDETDGLRITLTDERIIHLRPSGNAPELRCYAEADSYSKAHELVNNSLINIQKI CCCCCCCEEEEEECCEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379320 [H]