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The map label for this gene is cspG [H]

Identifier: 119944526

GI number: 119944526

Start: 949524

End: 949730

Strand: Direct

Name: cspG [H]

Synonym: Ping_0755

Alternate gene names: 119944526

Gene position: 949524-949730 (Clockwise)

Preceding gene: 119944524

Following gene: 119944527

Centisome position: 20.82

GC content: 39.13

Gene sequence:

>207_bases
ATGTCTACAACTACTGGTACAGTAAAATGGTTCAACGAGTCTAAAGGTTTTGGTTTTATCGAGCAAGAAAGCGGTCCTGA
CGTTTTTGCTCATTTCAGCGCTATCTCAAGCACAGGTTTCAAAACTTTAACTGAAGGTCAAAAAGTACAGTTTACTGTTA
CTCAAGGTCAAAAAGGCCCACAAGCAGAAAATATCGTAGCGCTTTAA

Upstream 100 bases:

>100_bases
ATTATGTACCGACTCCTATACTTCATAAGTAATAGCAAAACTTCTAGCAAACTACCTTAAACACAAGGTTAAATTACTCT
AAATTAAATAGGTTACAATT

Downstream 100 bases:

>100_bases
TATTGCTTCGATTGAACTTTAATTAGTTCTTTCTATTTGAATAAAAAGGTAAGTCATTGACTTGCCTTTTTTTATGCCCA
TAATAAAATATTATCTGTTT

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MSTTTGTVKWFNESKGFGFIEQESGPDVFAHFSAISSTGFKTLTEGQKVQFTVTQGQKGPQAENIVAL

Sequences:

>Translated_68_residues
MSTTTGTVKWFNESKGFGFIEQESGPDVFAHFSAISSTGFKTLTEGQKVQFTVTQGQKGPQAENIVAL
>Mature_67_residues
STTTGTVKWFNESKGFGFIEQESGPDVFAHFSAISSTGFKTLTEGQKVQFTVTQGQKGPQAENIVAL

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI1786841, Length=69, Percent_Identity=65.2173913043478, Blast_Score=94, Evalue=2e-21,
Organism=Escherichia coli, GI1788126, Length=69, Percent_Identity=60.8695652173913, Blast_Score=85, Evalue=9e-19,
Organism=Escherichia coli, GI2367114, Length=65, Percent_Identity=60, Blast_Score=83, Evalue=3e-18,
Organism=Escherichia coli, GI1789979, Length=65, Percent_Identity=60, Blast_Score=82, Evalue=9e-18,
Organism=Escherichia coli, GI1787834, Length=65, Percent_Identity=61.5384615384615, Blast_Score=79, Evalue=6e-17,
Organism=Escherichia coli, GI1787839, Length=63, Percent_Identity=57.1428571428571, Blast_Score=76, Evalue=4e-16,
Organism=Escherichia coli, GI1787107, Length=64, Percent_Identity=57.8125, Blast_Score=73, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7330; Mature: 7199

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTGTVKWFNESKGFGFIEQESGPDVFAHFSAISSTGFKTLTEGQKVQFTVTQGQKGP
CCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEHHCCCCCEECCCCCEEEEEECCCCCCC
QAENIVAL
CCCCEEEC
>Mature Secondary Structure 
STTTGTVKWFNESKGFGFIEQESGPDVFAHFSAISSTGFKTLTEGQKVQFTVTQGQKGP
CCCCCEEEEEECCCCCEEEECCCCCCEEEEEEHHCCCCCEECCCCCEEEEEECCCCCCC
QAENIVAL
CCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]