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The map label for this gene is ybgC [H]

Identifier: 119944494

GI number: 119944494

Start: 917408

End: 917860

Strand: Direct

Name: ybgC [H]

Synonym: Ping_0723

Alternate gene names: 119944494

Gene position: 917408-917860 (Clockwise)

Preceding gene: 119944493

Following gene: 119944495

Centisome position: 20.12

GC content: 37.09

Gene sequence:

>453_bases
ATGGTATTTATAGTAGTTTTAGCTTTTATTATTTTTTGGAAAAACTGTGTATTCATGTCAACTTTAGCCGTACGAATTTA
TTATGAAGACACCGATGCCGGTGGTGTTGTTTATTACGCAAATTATCTGAAATTTTTTGAGCGCGGGCGTACTGAATTTT
TACGTGAGCTTGACATCCAACAAGACACATTATTGGATAAAAATATTGCATTTGTAGTGCGTAAAGTGGAGATGGATTGT
CTTAAACCTGCCCGTTTTAATGCGTTACTGAGCGTGAAAACACAAATAACCGGTCACAAAAAAGCTAGCTTAATATTTCA
ACAAGAAGTTTTTCATGAAAACGGGGAACTTCTATGCCAAGCTAGCACTCTAATCGCCTGTGTTAATTTACAGAAAATGA
AACCCGCAGCTATTCCGGCTGAAATTATTGAGGTAATCGCCAGTGCATGCTGA

Upstream 100 bases:

>100_bases
TCAATCGCATAGTGTGATTTAACAATCCTAAAAGCAAAAGAGGCAATTACTGCCTCTTTTTTTTTGATTGACTAAAATAT
CTGACATTATTCGACAAAAT

Downstream 100 bases:

>100_bases
TATGTCTTTTTTAGGTCTGTTTTTACAAGCTAGTTGGCTTGTGAAATTTGTATTAATTCTTTTGCTTGGAATGTCCATTT
ATTCCTGGACATTGATTTTC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVFIVVLAFIIFWKNCVFMSTLAVRIYYEDTDAGGVVYYANYLKFFERGRTEFLRELDIQQDTLLDKNIAFVVRKVEMDC
LKPARFNALLSVKTQITGHKKASLIFQQEVFHENGELLCQASTLIACVNLQKMKPAAIPAEIIEVIASAC

Sequences:

>Translated_150_residues
MVFIVVLAFIIFWKNCVFMSTLAVRIYYEDTDAGGVVYYANYLKFFERGRTEFLRELDIQQDTLLDKNIAFVVRKVEMDC
LKPARFNALLSVKTQITGHKKASLIFQQEVFHENGELLCQASTLIACVNLQKMKPAAIPAEIIEVIASAC
>Mature_150_residues
MVFIVVLAFIIFWKNCVFMSTLAVRIYYEDTDAGGVVYYANYLKFFERGRTEFLRELDIQQDTLLDKNIAFVVRKVEMDC
LKPARFNALLSVKTQITGHKKASLIFQQEVFHENGELLCQASTLIACVNLQKMKPAAIPAEIIEVIASAC

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=120, Percent_Identity=46.6666666666667, Blast_Score=125, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17078; Mature: 17078

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFIVVLAFIIFWKNCVFMSTLAVRIYYEDTDAGGVVYYANYLKFFERGRTEFLRELDIQ
CHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEHHHHHHHHHHCCHHHHHHHHCCC
QDTLLDKNIAFVVRKVEMDCLKPARFNALLSVKTQITGHKKASLIFQQEVFHENGELLCQ
HHHHHCCHHHHHHHHHHHHHCCCCHHHHHEEEHHHHCCCHHHHHHHHHHHHHCCCCEEEE
ASTLIACVNLQKMKPAAIPAEIIEVIASAC
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVFIVVLAFIIFWKNCVFMSTLAVRIYYEDTDAGGVVYYANYLKFFERGRTEFLRELDIQ
CHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEHHHHHHHHHHCCHHHHHHHHCCC
QDTLLDKNIAFVVRKVEMDCLKPARFNALLSVKTQITGHKKASLIFQQEVFHENGELLCQ
HHHHHCCHHHHHHHHHHHHHCCCCHHHHHEEEHHHHCCCHHHHHHHHHHHHHCCCCEEEE
ASTLIACVNLQKMKPAAIPAEIIEVIASAC
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]