| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is pyrG
Identifier: 119944440
GI number: 119944440
Start: 856067
End: 857704
Strand: Direct
Name: pyrG
Synonym: Ping_0668
Alternate gene names: 119944440
Gene position: 856067-857704 (Clockwise)
Preceding gene: 119944439
Following gene: 119944441
Centisome position: 18.78
GC content: 43.04
Gene sequence:
>1638_bases ATGACGACAAAATATATTTTCGTAACGGGTGGTGTTGTTTCATCACTCGGTAAAGGCATTGCAGCAGGTTCACTGGCTGC TATTCTAGAAGCACGTGGTCTGGATGTCACCATTCTGAAACTAGATCCTTATATTAACGTAGACCCTGGCACCATGAGTC CAATACAACATGGTGAAGTTTTTGTAACCGATGACGGTGCAGAAACAGATCTTGATTTAGGGCATTATGAGCGTTATATC CGCACCAGAATGACCGCCCGTAATAACTTTACAACGGGTCGTGTTTATTCTGAAGTGATGGCTAAAGAGCGTCGTGGTGA TTACCTTGGTGCAACCATCCAGGTTATTCCACATATTACTAACGAGATTCAAGAACGTATTGTTGCTGGTGGTAAAGGCC ATGATATTGCGATCGTTGAACTCGGTGGCACGGTAGGTGATATTGAATCACAGCCCTTTTTGGAAGCGATTCGTCAGCTG GGGCTAAAAGTCGGGCGTGACAGTGTTATCTACATGCACCTGACATTACTGCCTTACTTAAAAACCGCCGGTGAAGTTAA AACCAAACCCACACAGCATTCGGTTAAAGAGTTGCGCAGTTTAGGTATTCAGCCAGATATTTTAGTCTGCCGCTCTGAAG TGAATATTCCCATTAACGAACGTGTGAAGATCGCCTTATTCTGTAATGTCACCGAAAAATCGGTGATTTTATTACGCGAT GTAGATTCTATCTATAAAATTCCAGCCTTGTTAAAAGCGCAGGGTCTTGATGAGATTTGTGTCAAACGTTTTGGTCTTGA CTGCCCCGAAGCTGACTTAAGCGAATGGGCGCAAGTCGTTTCTGAAGAAGCGAACACCTCAAATGAAGTTATCATTGGCA TGGTAGGTAAATACACTGAACTGCCAGATGCCTATAAATCTGTTAATGAAGCGCTTAAACATGGCGGGCTTAAAAATGCG GCATCGGTCAAAATAAAATACATCGACTCGCAGGATGTTGAAGTGAGAGGCGTTTCTATTTTAGAAGGCGTTGATGCGAT TTTAGTGCCGGGCGGTTTTGGTGAACGCGGTATTGAAGGTAAAATCCTCGCGGCTCAATATGCACGCGTAAATAAAATAC CTTATTTAGGTATCTGTTTAGGGATGCAGGTTGCGATCATTGAGTTTGCACGCAATGTCGCTGGCCTTAAAAATGCCCAT TCAACGGAATTTGAGGCTAACTGTGACCAACCTGTTGTTGGCTTGATCACTGAGTGGCTTGATAAAACCGGTGAAGTTGA ACAGCGCACCGAAAATTCGGATTTAGGGGGCACGATGCGGGTAGGTGCACAGCTTTGCCACCTTAAAAAAGGTTCTAAAG TGTTTGATATGTACGGCACAAAAGAGATATTTGAACGCCATCGTCATCGTTATGAGGTAAATAATAATTTATTACCTATT TTAGAGAAAGCGGGGCTAGTGGTCACCGGTTTATCTGAAGATAAAAAATTAGTCGAAATTATTGAAATCCCAAATCATCC CTGGTTCGTTGCTTCTCAATTCCATCCGGAATTCACCTCGACACCAAGAGATGGACACCCTTTATTTAAAGGTTTCATAA AATCTGCGATAGATCATCAACAGGGCCGATTTGAATAG
Upstream 100 bases:
>100_bases ATTAACCTCAGTGATTTCGTAAGCTGATGGTTTTTTGCGTTTTTATTTTTACAATTGAAGCTGAGTTTATTTTTCCCATT CCTAAATTTTCAGGGTTACT
Downstream 100 bases:
>100_bases TTTTTGTTGACCAGATCACTTTTTTTTGTTAAAAAATAACGCATTAAAGTGATCTGGAATTATATAACCCATTTTTAAAC TTATTTTTAATACAACTAAA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTTKYIFVTGGVVSSLGKGIAAGSLAAILEARGLDVTILKLDPYINVDPGTMSPIQHGEVFVTDDGAETDLDLGHYERYI RTRMTARNNFTTGRVYSEVMAKERRGDYLGATIQVIPHITNEIQERIVAGGKGHDIAIVELGGTVGDIESQPFLEAIRQL GLKVGRDSVIYMHLTLLPYLKTAGEVKTKPTQHSVKELRSLGIQPDILVCRSEVNIPINERVKIALFCNVTEKSVILLRD VDSIYKIPALLKAQGLDEICVKRFGLDCPEADLSEWAQVVSEEANTSNEVIIGMVGKYTELPDAYKSVNEALKHGGLKNA ASVKIKYIDSQDVEVRGVSILEGVDAILVPGGFGERGIEGKILAAQYARVNKIPYLGICLGMQVAIIEFARNVAGLKNAH STEFEANCDQPVVGLITEWLDKTGEVEQRTENSDLGGTMRVGAQLCHLKKGSKVFDMYGTKEIFERHRHRYEVNNNLLPI LEKAGLVVTGLSEDKKLVEIIEIPNHPWFVASQFHPEFTSTPRDGHPLFKGFIKSAIDHQQGRFE
Sequences:
>Translated_545_residues MTTKYIFVTGGVVSSLGKGIAAGSLAAILEARGLDVTILKLDPYINVDPGTMSPIQHGEVFVTDDGAETDLDLGHYERYI RTRMTARNNFTTGRVYSEVMAKERRGDYLGATIQVIPHITNEIQERIVAGGKGHDIAIVELGGTVGDIESQPFLEAIRQL GLKVGRDSVIYMHLTLLPYLKTAGEVKTKPTQHSVKELRSLGIQPDILVCRSEVNIPINERVKIALFCNVTEKSVILLRD VDSIYKIPALLKAQGLDEICVKRFGLDCPEADLSEWAQVVSEEANTSNEVIIGMVGKYTELPDAYKSVNEALKHGGLKNA ASVKIKYIDSQDVEVRGVSILEGVDAILVPGGFGERGIEGKILAAQYARVNKIPYLGICLGMQVAIIEFARNVAGLKNAH STEFEANCDQPVVGLITEWLDKTGEVEQRTENSDLGGTMRVGAQLCHLKKGSKVFDMYGTKEIFERHRHRYEVNNNLLPI LEKAGLVVTGLSEDKKLVEIIEIPNHPWFVASQFHPEFTSTPRDGHPLFKGFIKSAIDHQQGRFE >Mature_544_residues TTKYIFVTGGVVSSLGKGIAAGSLAAILEARGLDVTILKLDPYINVDPGTMSPIQHGEVFVTDDGAETDLDLGHYERYIR TRMTARNNFTTGRVYSEVMAKERRGDYLGATIQVIPHITNEIQERIVAGGKGHDIAIVELGGTVGDIESQPFLEAIRQLG LKVGRDSVIYMHLTLLPYLKTAGEVKTKPTQHSVKELRSLGIQPDILVCRSEVNIPINERVKIALFCNVTEKSVILLRDV DSIYKIPALLKAQGLDEICVKRFGLDCPEADLSEWAQVVSEEANTSNEVIIGMVGKYTELPDAYKSVNEALKHGGLKNAA SVKIKYIDSQDVEVRGVSILEGVDAILVPGGFGERGIEGKILAAQYARVNKIPYLGICLGMQVAIIEFARNVAGLKNAHS TEFEANCDQPVVGLITEWLDKTGEVEQRTENSDLGGTMRVGAQLCHLKKGSKVFDMYGTKEIFERHRHRYEVNNNLLPIL EKAGLVVTGLSEDKKLVEIIEIPNHPWFVASQFHPEFTSTPRDGHPLFKGFIKSAIDHQQGRFE
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=558, Percent_Identity=44.6236559139785, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI28559085, Length=557, Percent_Identity=45.2423698384201, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI28559083, Length=557, Percent_Identity=45.2423698384201, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI221316689, Length=557, Percent_Identity=45.2423698384201, Blast_Score=466, Evalue=1e-131, Organism=Escherichia coli, GI1789142, Length=541, Percent_Identity=73.3826247689464, Blast_Score=814, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=618, Percent_Identity=38.1877022653722, Blast_Score=415, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319432, Length=572, Percent_Identity=43.006993006993, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=41.4762741652021, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI24664469, Length=559, Percent_Identity=45.0805008944544, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=43.3663366336634, Blast_Score=399, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_PSYIN (A1SSQ6)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942120.1 - ProteinModelPortal: A1SSQ6 - SMR: A1SSQ6 - STRING: A1SSQ6 - GeneID: 4626905 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0668 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - PhylomeDB: A1SSQ6 - ProtClustDB: PRK05380 - BioCyc: PING357804:PING_0668-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60031; Mature: 59900
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 379-379 ACT_SITE 515-515 ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKYIFVTGGVVSSLGKGIAAGSLAAILEARGLDVTILKLDPYINVDPGTMSPIQHGEV CCEEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTDDGAETDLDLGHYERYIRTRMTARNNFTTGRVYSEVMAKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH NEIQERIVAGGKGHDIAIVELGGTVGDIESQPFLEAIRQLGLKVGRDSVIYMHLTLLPYL HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHH KTAGEVKTKPTQHSVKELRSLGIQPDILVCRSEVNIPINERVKIALFCNVTEKSVILLRD HCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEC VDSIYKIPALLKAQGLDEICVKRFGLDCPEADLSEWAQVVSEEANTSNEVIIGMVGKYTE HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC LPDAYKSVNEALKHGGLKNAASVKIKYIDSQDVEVRGVSILEGVDAILVPGGFGERGIEG CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCHHHCCCCEEEECCCCCCCCCCC KILAAQYARVNKIPYLGICLGMQVAIIEFARNVAGLKNAHSTEFEANCDQPVVGLITEWL CEEEHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH DKTGEVEQRTENSDLGGTMRVGAQLCHLKKGSKVFDMYGTKEIFERHRHRYEVNNNLLPI HCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHEECCCCCHHH LEKAGLVVTGLSEDKKLVEIIEIPNHPWFVASQFHPEFTSTPRDGHPLFKGFIKSAIDHQ HHHCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC QGRFE CCCCC >Mature Secondary Structure TTKYIFVTGGVVSSLGKGIAAGSLAAILEARGLDVTILKLDPYINVDPGTMSPIQHGEV CEEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTDDGAETDLDLGHYERYIRTRMTARNNFTTGRVYSEVMAKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH NEIQERIVAGGKGHDIAIVELGGTVGDIESQPFLEAIRQLGLKVGRDSVIYMHLTLLPYL HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHH KTAGEVKTKPTQHSVKELRSLGIQPDILVCRSEVNIPINERVKIALFCNVTEKSVILLRD HCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEC VDSIYKIPALLKAQGLDEICVKRFGLDCPEADLSEWAQVVSEEANTSNEVIIGMVGKYTE HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC LPDAYKSVNEALKHGGLKNAASVKIKYIDSQDVEVRGVSILEGVDAILVPGGFGERGIEG CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCHHHCCCCEEEECCCCCCCCCCC KILAAQYARVNKIPYLGICLGMQVAIIEFARNVAGLKNAHSTEFEANCDQPVVGLITEWL CEEEHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH DKTGEVEQRTENSDLGGTMRVGAQLCHLKKGSKVFDMYGTKEIFERHRHRYEVNNNLLPI HCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHEECCCCCHHH LEKAGLVVTGLSEDKKLVEIIEIPNHPWFVASQFHPEFTSTPRDGHPLFKGFIKSAIDHQ HHHCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC QGRFE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA