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The map label for this gene is mdtA [H]

Identifier: 119944436

GI number: 119944436

Start: 851814

End: 852842

Strand: Reverse

Name: mdtA [H]

Synonym: Ping_0664

Alternate gene names: 119944436

Gene position: 852842-851814 (Counterclockwise)

Preceding gene: 119944450

Following gene: 119944435

Centisome position: 18.7

GC content: 39.94

Gene sequence:

>1029_bases
ATGAAATCAAAATATTATTCACTCTCAGCATTTTTTATAAGCTTGTTTTTTGCCATTATTTACAGTAAATCGCTTTTAGC
AGATACATTGTTTGAAGTAATCGATCAGAAAAAAGAACAGATCGTCGTTTTAGATGCCACCATTGAGGCCATTAATAAAG
CAACGGTTTCTTCACAAACCAGCGGGCGTATTACAAAAATTAATTTTGATACAAATGATTATGTCGAACAAGACAGCATT
ATATTGGAAATGACCAACAAAGAGCAGGGAGCACAGCTCGCCGCTGCGGAAGCTAATGTATTACGCACTCAGGCGGCCTA
TAATGAATCAAAATTAAATTATGATCGTTATAAAAAACTTTTTCCTAAAGGTGCTATTTCACAAGGGCAATTAGATCAGG
CTGCAGCGACAGCTGAAACCAATAAACAGCTTATAAAGGCAGCCCAGGCGGGTTTAATCCAAGCCAAAGAATCCTTAGAT
TATACTATTATCAAAGCCCCCTTCGCAGGTGTTGTGACCGAACGGCATGTCGAGATTGGTGAAACAGTCAATCCCGGCGC
GCCACTTTTTTCCGGTATGTCATTAACCAACCTGCGTGCGATAACTGAGATTCCGCAACGTTATCTTGTGGCGCTGCGTA
ATAATCCAGAGTTTATTATTACTCTCAGTGATGGCAGTAAACTGTTTTCGAATAAAATCACGTTATTTAACTATGCCGAT
CAACAGTCTCATGCTTTTAAGGTCCGTATAGACTTACCGCCTACCGAGAAACTCTTATTACCCGGAATGTGGGTGAAAGT
ACAATTTGTTTGGGGAGAATCAAAAATGATTAGCGTACCCAGCAGCGCAATCTTGACCAATAACGAACTGAATGCAGTCT
ATCGGGATGTTGATGGTAAAGCGGTGTTAACTCAAGTTCGATTGGGTAATAGTCTGGATAACGAGGTTGAAATTTTATCC
GGATTACATTCCGGCGATAAAATCAGTATTGATGCTTACCAAAAGCTACAACAGCTAGGGGCTAAATAA

Upstream 100 bases:

>100_bases
TAACTACATTTAATGATATAACATTTTGAGCTTGGAAATAAGATAAAACTATATTAGCATAAGCTAATTAAAATTAAGGT
TCATTGTCAAGGGCGCACTC

Downstream 100 bases:

>100_bases
TGAATTCTCAACTCAATATTTCAGGGAGAATTGCACAATATTTCCAAGGGGCTGCCATCACCCCTTTGCTTGCTATTGTC
GGATTATTATTAGGTTTTTT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKSKYYSLSAFFISLFFAIIYSKSLLADTLFEVIDQKKEQIVVLDATIEAINKATVSSQTSGRITKINFDTNDYVEQDSI
ILEMTNKEQGAQLAAAEANVLRTQAAYNESKLNYDRYKKLFPKGAISQGQLDQAAATAETNKQLIKAAQAGLIQAKESLD
YTIIKAPFAGVVTERHVEIGETVNPGAPLFSGMSLTNLRAITEIPQRYLVALRNNPEFIITLSDGSKLFSNKITLFNYAD
QQSHAFKVRIDLPPTEKLLLPGMWVKVQFVWGESKMISVPSSAILTNNELNAVYRDVDGKAVLTQVRLGNSLDNEVEILS
GLHSGDKISIDAYQKLQQLGAK

Sequences:

>Translated_342_residues
MKSKYYSLSAFFISLFFAIIYSKSLLADTLFEVIDQKKEQIVVLDATIEAINKATVSSQTSGRITKINFDTNDYVEQDSI
ILEMTNKEQGAQLAAAEANVLRTQAAYNESKLNYDRYKKLFPKGAISQGQLDQAAATAETNKQLIKAAQAGLIQAKESLD
YTIIKAPFAGVVTERHVEIGETVNPGAPLFSGMSLTNLRAITEIPQRYLVALRNNPEFIITLSDGSKLFSNKITLFNYAD
QQSHAFKVRIDLPPTEKLLLPGMWVKVQFVWGESKMISVPSSAILTNNELNAVYRDVDGKAVLTQVRLGNSLDNEVEILS
GLHSGDKISIDAYQKLQQLGAK
>Mature_342_residues
MKSKYYSLSAFFISLFFAIIYSKSLLADTLFEVIDQKKEQIVVLDATIEAINKATVSSQTSGRITKINFDTNDYVEQDSI
ILEMTNKEQGAQLAAAEANVLRTQAAYNESKLNYDRYKKLFPKGAISQGQLDQAAATAETNKQLIKAAQAGLIQAKESLD
YTIIKAPFAGVVTERHVEIGETVNPGAPLFSGMSLTNLRAITEIPQRYLVALRNNPEFIITLSDGSKLFSNKITLFNYAD
QQSHAFKVRIDLPPTEKLLLPGMWVKVQFVWGESKMISVPSSAILTNNELNAVYRDVDGKAVLTQVRLGNSLDNEVEILS
GLHSGDKISIDAYQKLQQLGAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=325, Percent_Identity=26.7692307692308, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87082036, Length=316, Percent_Identity=23.4177215189873, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37824; Mature: 37824

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKYYSLSAFFISLFFAIIYSKSLLADTLFEVIDQKKEQIVVLDATIEAINKATVSSQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCC
SGRITKINFDTNDYVEQDSIILEMTNKEQGAQLAAAEANVLRTQAAYNESKLNYDRYKKL
CCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHH
FPKGAISQGQLDQAAATAETNKQLIKAAQAGLIQAKESLDYTIIKAPFAGVVTERHVEIG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCEECC
ETVNPGAPLFSGMSLTNLRAITEIPQRYLVALRNNPEFIITLSDGSKLFSNKITLFNYAD
CCCCCCCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCEEEEECCCCHHHHCCEEEEEECC
QQSHAFKVRIDLPPTEKLLLPGMWVKVQFVWGESKMISVPSSAILTNNELNAVYRDVDGK
CCCCEEEEEEECCCCHHEECCCEEEEEEEEECCCEEEECCCCEEEECCCCHHEEECCCCC
AVLTQVRLGNSLDNEVEILSGLHSGDKISIDAYQKLQQLGAK
EEEEEECCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MKSKYYSLSAFFISLFFAIIYSKSLLADTLFEVIDQKKEQIVVLDATIEAINKATVSSQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCC
SGRITKINFDTNDYVEQDSIILEMTNKEQGAQLAAAEANVLRTQAAYNESKLNYDRYKKL
CCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHH
FPKGAISQGQLDQAAATAETNKQLIKAAQAGLIQAKESLDYTIIKAPFAGVVTERHVEIG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCEECC
ETVNPGAPLFSGMSLTNLRAITEIPQRYLVALRNNPEFIITLSDGSKLFSNKITLFNYAD
CCCCCCCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCEEEEECCCCHHHHCCEEEEEECC
QQSHAFKVRIDLPPTEKLLLPGMWVKVQFVWGESKMISVPSSAILTNNELNAVYRDVDGK
CCCCEEEEEEECCCCHHEECCCEEEEEEEEECCCEEEECCCCEEEECCCCHHEEECCCCC
AVLTQVRLGNSLDNEVEILSGLHSGDKISIDAYQKLQQLGAK
EEEEEECCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]