| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is panC
Identifier: 119944352
GI number: 119944352
Start: 758404
End: 759273
Strand: Reverse
Name: panC
Synonym: Ping_0579
Alternate gene names: 119944352
Gene position: 759273-758404 (Counterclockwise)
Preceding gene: 119944353
Following gene: 119944351
Centisome position: 16.65
GC content: 39.66
Gene sequence:
>870_bases ATGCTTATTATTGATAATCCACAGCAACTACGTGAAAAGATAAAACAACTCAAACAGCAAGGGTCTGAAATTGCTTTTGT GCCTACCATGGGAAATTTACATGAGGGGCATTTAACTCTAGTGCAGGCTGGCCAGAAAAAAGCTGCCGTGGTTATTGTGA GTATTTTTATTAACCCGATGCAGTTTAATAATGCACAGGATTTGCTAAATTATCCAAAAACAATGGCGCAAGATTGTGAA AAACTGGCGGCGGCTGGGGTAAATATTATTTTTACGCCCGCAGCGAGCAGCATTTATCCAAATGGTTTGAATGCTCAAAC CTATGTTGAGGTGCCCCTTTTATCTAATTGTTTAGAAGGCGAACTTCGCCCAGGACATTTCCGCGGCATGAGCACCATAG TGAATAAATTATTTAACCTTGTTCAACCTGATTATGCCTGTTTTGGTGAAAAAGACTTTCAGCAGTTAGCCATTGTCAAA CAGATGGTAAGCGATTTAGGCATGCCCATTGAGATAATTCCGGTTGCGACTATGCGCGAAAAAAATGGCCTGGCGATGAG TTCTCGCAATGGTAAACTGAGCAGCTTAGAAAAACAAAAAGCGCCTCTTTTAGCAAAAGTGATGAATCAATTAGCTGTTG ATGTGCAAGCACAGAAAACTGAACTTTCAATATTAATAGATGATGCCTCAATCATCCTTAATAACGCCGGTTTTAATACC GATGCTATCCATATTGTCGATGCACAAACATTACAGGCGGTGAATTGCCATAGTAAGGAAGCGGTTATTTTAATGGCGGC TTTTTTAGGGGAAACACGTTTAATTGATAATAAAGTAGTCATCCTGAATCATTCGGCAACAAAAATTTAA
Upstream 100 bases:
>100_bases ATATTCGCCAGGCGGTAACGCTTTATATAGATCAAGTTGAAAGCAGACAATTCCCGTCTGCTGAACACAGTTTTTATTAA GTATATTGGCAGATAAAAAC
Downstream 100 bases:
>100_bases GTGTAATTTCTTGGTGTTGCGTCGACTTTTAATCAATACGCCATCTTTCCTTGATGTTATAAATTTGACTTTCATCAAAG CGCATTATAACTCTACAGAT
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MLIIDNPQQLREKIKQLKQQGSEIAFVPTMGNLHEGHLTLVQAGQKKAAVVIVSIFINPMQFNNAQDLLNYPKTMAQDCE KLAAAGVNIIFTPAASSIYPNGLNAQTYVEVPLLSNCLEGELRPGHFRGMSTIVNKLFNLVQPDYACFGEKDFQQLAIVK QMVSDLGMPIEIIPVATMREKNGLAMSSRNGKLSSLEKQKAPLLAKVMNQLAVDVQAQKTELSILIDDASIILNNAGFNT DAIHIVDAQTLQAVNCHSKEAVILMAAFLGETRLIDNKVVILNHSATKI
Sequences:
>Translated_289_residues MLIIDNPQQLREKIKQLKQQGSEIAFVPTMGNLHEGHLTLVQAGQKKAAVVIVSIFINPMQFNNAQDLLNYPKTMAQDCE KLAAAGVNIIFTPAASSIYPNGLNAQTYVEVPLLSNCLEGELRPGHFRGMSTIVNKLFNLVQPDYACFGEKDFQQLAIVK QMVSDLGMPIEIIPVATMREKNGLAMSSRNGKLSSLEKQKAPLLAKVMNQLAVDVQAQKTELSILIDDASIILNNAGFNT DAIHIVDAQTLQAVNCHSKEAVILMAAFLGETRLIDNKVVILNHSATKI >Mature_289_residues MLIIDNPQQLREKIKQLKQQGSEIAFVPTMGNLHEGHLTLVQAGQKKAAVVIVSIFINPMQFNNAQDLLNYPKTMAQDCE KLAAAGVNIIFTPAASSIYPNGLNAQTYVEVPLLSNCLEGELRPGHFRGMSTIVNKLFNLVQPDYACFGEKDFQQLAIVK QMVSDLGMPIEIIPVATMREKNGLAMSSRNGKLSSLEKQKAPLLAKVMNQLAVDVQAQKTELSILIDDASIILNNAGFNT DAIHIVDAQTLQAVNCHSKEAVILMAAFLGETRLIDNKVVILNHSATKI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=282, Percent_Identity=54.9645390070922, Blast_Score=325, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6322046, Length=302, Percent_Identity=33.4437086092715, Blast_Score=151, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_PSYIN (A1SSG8)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942032.1 - ProteinModelPortal: A1SSG8 - SMR: A1SSG8 - STRING: A1SSG8 - GeneID: 4624134 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0579 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: DEAHDAK - PhylomeDB: A1SSG8 - BioCyc: PING357804:PING_0579-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31603; Mature: 31603
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: ACT_SITE 37-37 BINDING 61-61 BINDING 61-61 BINDING 155-155
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIDNPQQLREKIKQLKQQGSEIAFVPTMGNLHEGHLTLVQAGQKKAAVVIVSIFINPM CEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEECCC QFNNAQDLLNYPKTMAQDCEKLAAAGVNIIFTPAASSIYPNGLNAQTYVEVPLLSNCLEG CCCCHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECHHHHHHHCC ELRPGHFRGMSTIVNKLFNLVQPDYACFGEKDFQQLAIVKQMVSDLGMPIEIIPVATMRE CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEC KNGLAMSSRNGKLSSLEKQKAPLLAKVMNQLAVDVQAQKTELSILIDDASIILNNAGFNT CCCCEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCEECCEEEEEEEECCEEEEECCCCCC DAIHIVDAQTLQAVNCHSKEAVILMAAFLGETRLIDNKVVILNHSATKI CEEEEEEHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEEEEECCCCCC >Mature Secondary Structure MLIIDNPQQLREKIKQLKQQGSEIAFVPTMGNLHEGHLTLVQAGQKKAAVVIVSIFINPM CEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEECCC QFNNAQDLLNYPKTMAQDCEKLAAAGVNIIFTPAASSIYPNGLNAQTYVEVPLLSNCLEG CCCCHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECHHHHHHHCC ELRPGHFRGMSTIVNKLFNLVQPDYACFGEKDFQQLAIVKQMVSDLGMPIEIIPVATMRE CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEC KNGLAMSSRNGKLSSLEKQKAPLLAKVMNQLAVDVQAQKTELSILIDDASIILNNAGFNT CCCCEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCEECCEEEEEEEECCEEEEECCCCCC DAIHIVDAQTLQAVNCHSKEAVILMAAFLGETRLIDNKVVILNHSATKI CEEEEEEHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA