Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944236
Identifier: 119944236
GI number: 119944236
Start: 582221
End: 583657
Strand: Direct
Name: 119944236
Synonym: Ping_0459
Alternate gene names: NA
Gene position: 582221-583657 (Clockwise)
Preceding gene: 119944235
Following gene: 119944237
Centisome position: 12.77
GC content: 38.69
Gene sequence:
>1437_bases ATGTTCAATAAAACACCGCGAAGTATTGCAATAAAAACATTGATGGTTGCGGCTATTTTTTTAAGTGTTCTTATTGGTTA TCAATTATGGCAAGAATATAGAATGAACGTGCTTATTAATATTGACACCAGTGCTGGGAGTATTGTCGCGGTGGATATTA CCTGGCAAGATGATTCTGATGACGAGGATGGTTTTGTTGTTGAACGAAAAGAAAGTGGTGATTTTGTGGAGGTGGCTAGA TTAAATTCAAATGTGACCGCTTATACAGATTATAGCCTTGTTGCAGGAACGGCTTATTGCTATAGAATTGGGGCGTTTAA TCAGGTAGGAACTGCCTATTCCGATGAATATTGTATTGACATTCCTGAGGCAGATATTGTAGTAGATACCACTTTGCCTC CGTTGACAGGCAGCGAAACGATTACCAGCGAGTTTATTACACAACCTAATGTTATCGAGCTTGCGGGGCGAGAGCTGTAT AGCTTTAAAAGTAGTGCAACTTATAATGTTGATTTTAGCAAAGATGAAGTAGAAAATATTCAGTATAATATTGCAGACGG GAACTTGTCTTATGAGGATTCAGCTTTATTTACATTCCAAGATGAAGGCAGTTACGTTGAGAGTGGTTTTGTTTCGATGC GTTACAATGAAGTAAATAACGTGAGTTTTTCACTCAATGGCAATGGTGATCCTCAAGTCGCGTCACTATATATGTCGGTT GGTGTCTGGAGTTCAGTGCCTGCTGCATTTTTAGTCATAGCTGGCGATACGAGTGATATTATATCTATCCCCCGTGGATA CGGTTGGCATTATCTGAAGATTGATATTGCCTTTGATGAGTCGATGGAGGTGAAAATCAACCCTATTGGTGTTTTTGGCG GCTATAGTGCTTTAAACGTTGCGGGTGTTGTTTTGAATGAAAAGAGCATCTCTACTAGCTTTGCTTCATTAACAGATATA AGCCTCGCTGATAGCGCGAATATTGATGTGAGTAATGTTAAATATATGACCTCCTATTTTATTTCCGGTAATGAAAAATT GAGTAGTGGAGAAGTGATTGGGATTGATTATCTAGGAACGTCTCAGTACCAAGATGCAATATATTCATTTATTGATAATG GCCAGGTGGTTGCAACGGGTTATACTGAAATGGCGTGGAAAAAAGCTAATGTTATCTCAATTGATTTGAAAAACAGTAGT GAGCAACCTGTTTATACCTCATTGTTTTTAAGAGCGGGAGCCTGGGTGGCTGGCACCTCACAACTCGAAATGAAACTTAA TGGAGAAACGTACCCGATAGAATTAAGTTATGGGTATGGATGGTTTTTTATTCGCGTTGATTTTGAATTTTCAGGGAATG CACATGTTGAGATAAAACCTGTTGACAATATTGGAGGCTATAGTCAAATAATGTTTGCTGGTTTAACCATGCAATAG
Upstream 100 bases:
>100_bases GTGTTCTTTAGTGCGGTTAAGCTATTTCATTACTATAATTTGAGTATGTTCTGACTTTCGTTATTAACAACGTTATTAAA TGAAAAAGAGGAAAGAGACT
Downstream 100 bases:
>100_bases GAGTGAAAAGCTACTTTCATTGAATAACGAACAATTAATGGCAAATCAGATGGTGCGATCACACTGTTTTGTTATTAGTT GTTTTTTCTATCCAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MFNKTPRSIAIKTLMVAAIFLSVLIGYQLWQEYRMNVLINIDTSAGSIVAVDITWQDDSDDEDGFVVERKESGDFVEVAR LNSNVTAYTDYSLVAGTAYCYRIGAFNQVGTAYSDEYCIDIPEADIVVDTTLPPLTGSETITSEFITQPNVIELAGRELY SFKSSATYNVDFSKDEVENIQYNIADGNLSYEDSALFTFQDEGSYVESGFVSMRYNEVNNVSFSLNGNGDPQVASLYMSV GVWSSVPAAFLVIAGDTSDIISIPRGYGWHYLKIDIAFDESMEVKINPIGVFGGYSALNVAGVVLNEKSISTSFASLTDI SLADSANIDVSNVKYMTSYFISGNEKLSSGEVIGIDYLGTSQYQDAIYSFIDNGQVVATGYTEMAWKKANVISIDLKNSS EQPVYTSLFLRAGAWVAGTSQLEMKLNGETYPIELSYGYGWFFIRVDFEFSGNAHVEIKPVDNIGGYSQIMFAGLTMQ
Sequences:
>Translated_478_residues MFNKTPRSIAIKTLMVAAIFLSVLIGYQLWQEYRMNVLINIDTSAGSIVAVDITWQDDSDDEDGFVVERKESGDFVEVAR LNSNVTAYTDYSLVAGTAYCYRIGAFNQVGTAYSDEYCIDIPEADIVVDTTLPPLTGSETITSEFITQPNVIELAGRELY SFKSSATYNVDFSKDEVENIQYNIADGNLSYEDSALFTFQDEGSYVESGFVSMRYNEVNNVSFSLNGNGDPQVASLYMSV GVWSSVPAAFLVIAGDTSDIISIPRGYGWHYLKIDIAFDESMEVKINPIGVFGGYSALNVAGVVLNEKSISTSFASLTDI SLADSANIDVSNVKYMTSYFISGNEKLSSGEVIGIDYLGTSQYQDAIYSFIDNGQVVATGYTEMAWKKANVISIDLKNSS EQPVYTSLFLRAGAWVAGTSQLEMKLNGETYPIELSYGYGWFFIRVDFEFSGNAHVEIKPVDNIGGYSQIMFAGLTMQ >Mature_478_residues MFNKTPRSIAIKTLMVAAIFLSVLIGYQLWQEYRMNVLINIDTSAGSIVAVDITWQDDSDDEDGFVVERKESGDFVEVAR LNSNVTAYTDYSLVAGTAYCYRIGAFNQVGTAYSDEYCIDIPEADIVVDTTLPPLTGSETITSEFITQPNVIELAGRELY SFKSSATYNVDFSKDEVENIQYNIADGNLSYEDSALFTFQDEGSYVESGFVSMRYNEVNNVSFSLNGNGDPQVASLYMSV GVWSSVPAAFLVIAGDTSDIISIPRGYGWHYLKIDIAFDESMEVKINPIGVFGGYSALNVAGVVLNEKSISTSFASLTDI SLADSANIDVSNVKYMTSYFISGNEKLSSGEVIGIDYLGTSQYQDAIYSFIDNGQVVATGYTEMAWKKANVISIDLKNSS EQPVYTSLFLRAGAWVAGTSQLEMKLNGETYPIELSYGYGWFFIRVDFEFSGNAHVEIKPVDNIGGYSQIMFAGLTMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52558; Mature: 52558
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKTPRSIAIKTLMVAAIFLSVLIGYQLWQEYRMNVLINIDTSAGSIVAVDITWQDDSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCC DEDGFVVERKESGDFVEVARLNSNVTAYTDYSLVAGTAYCYRIGAFNQVGTAYSDEYCID CCCCEEEEECCCCCEEEEEEECCCEEEEECCHHHCCCEEEEEECCCHHCCCCCCCCEEEE IPEADIVVDTTLPPLTGSETITSEFITQPNVIELAGRELYSFKSSATYNVDFSKDEVENI CCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCHHEEECCCCEEEEECCCCCCCCE QYNIADGNLSYEDSALFTFQDEGSYVESGFVSMRYNEVNNVSFSLNGNGDPQVASLYMSV EEEEECCCCCCCCCEEEEEECCCCEEECCEEEEEEECCCEEEEEECCCCCCHHEEEEEEC GVWSSVPAAFLVIAGDTSDIISIPRGYGWHYLKIDIAFDESMEVKINPIGVFGGYSALNV CCCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCHHEE AGVVLNEKSISTSFASLTDISLADSANIDVSNVKYMTSYFISGNEKLSSGEVIGIDYLGT EEEEEECCCCCCCHHHEEEEEECCCCCCCHHCEEEEEEEEECCCCCCCCCCEEEEEECCC SQYQDAIYSFIDNGQVVATGYTEMAWKKANVISIDLKNSSEQPVYTSLFLRAGAWVAGTS CHHHHHHHHHHCCCEEEEECCHHHHEECCCEEEEEECCCCCCCCEEEEEECCCCEEECCE QLEMKLNGETYPIELSYGYGWFFIRVDFEFSGNAHVEIKPVDNIGGYSQIMFAGLTMQ EEEEEECCCEEEEEEECCCEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECC >Mature Secondary Structure MFNKTPRSIAIKTLMVAAIFLSVLIGYQLWQEYRMNVLINIDTSAGSIVAVDITWQDDSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCC DEDGFVVERKESGDFVEVARLNSNVTAYTDYSLVAGTAYCYRIGAFNQVGTAYSDEYCID CCCCEEEEECCCCCEEEEEEECCCEEEEECCHHHCCCEEEEEECCCHHCCCCCCCCEEEE IPEADIVVDTTLPPLTGSETITSEFITQPNVIELAGRELYSFKSSATYNVDFSKDEVENI CCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCHHEEECCCCEEEEECCCCCCCCE QYNIADGNLSYEDSALFTFQDEGSYVESGFVSMRYNEVNNVSFSLNGNGDPQVASLYMSV EEEEECCCCCCCCCEEEEEECCCCEEECCEEEEEEECCCEEEEEECCCCCCHHEEEEEEC GVWSSVPAAFLVIAGDTSDIISIPRGYGWHYLKIDIAFDESMEVKINPIGVFGGYSALNV CCCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCHHEE AGVVLNEKSISTSFASLTDISLADSANIDVSNVKYMTSYFISGNEKLSSGEVIGIDYLGT EEEEEECCCCCCCHHHEEEEEECCCCCCCHHCEEEEEEEEECCCCCCCCCCEEEEEECCC SQYQDAIYSFIDNGQVVATGYTEMAWKKANVISIDLKNSSEQPVYTSLFLRAGAWVAGTS CHHHHHHHHHHCCCEEEEECCHHHHEECCCEEEEEECCCCCCCCEEEEEECCCCEEECCE QLEMKLNGETYPIELSYGYGWFFIRVDFEFSGNAHVEIKPVDNIGGYSQIMFAGLTMQ EEEEEECCCEEEEEEECCCEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA