Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944220
Identifier: 119944220
GI number: 119944220
Start: 560363
End: 561781
Strand: Direct
Name: 119944220
Synonym: Ping_0442
Alternate gene names: NA
Gene position: 560363-561781 (Clockwise)
Preceding gene: 119944219
Following gene: 119944221
Centisome position: 12.29
GC content: 37.56
Gene sequence:
>1419_bases ATGATTCGTATAACACTTCTTACTTTATTGGTTGCTTATTTAAGTGCTTACGCCTGGAAAGATTGGTTTCGCGCAGCTTG CTGGTTGGTATTGTTAATGGCGATCTTTGAGCATCCTGATATGCCTAAATCGATAGGTGGAGTCCCTGGGCTAAATCACT GGAATTTTTTATTTATAAATACAGTTTTATCTTGGTATTCCAATAGAAAAAAAGAAAAGCTAACTTGGGAGATGCCTCAA ATTGTTAACACCTTGTTTTTTTTATATGCATTTTTTATTTTCATTAGTTTGATTAGATACTTATATGACCATAGTGGTGT AATTGAATTGTTTGCAACCATTGGCGCCCCTCCTCCTGGGGCTATAAATGACATCAATGAATATCTGATCAACTGTTTTA AATGGGTGCTACCAGGAATGATTATTTTTGATGGTTGCCGCAATCGTAAGCAATATGATTTTGCCATCGGCACTTTAGCT TTAATGTTAATATTATTGGCACTGCAAGTGATAAAAGCGATGAAATTGGGATCGCTCACAATAGGGGGAGATGCCCTGCA GCATAAAGCGGCTAAAATCATCTCAAATAGCGTAGGCTATCATCGTGTAAATATATCAATGATGATGAGTGGGGCTTTTT GGGTTATTTTTTGTCTAAAAGAGTTAGTTAGCACTAAGCATTATTGGTTACTGATTTTGCCTAGTTGTTTTATTGTATTC CTGGCTATGGCTTTAACTGGAGGGCGAACTGGTTATGTTACTTGGGCTATTCTCGGGATTTTTTATTGCTTATTTAAATG GCGAAAATATATTTTATTGGCGCCATTAATGTTTTTAGCCATAACAATGTTTGTCCCTTCTGCGATTGAGCGTCTTGGCT TTGGTTTTTCATCTGAGCAGTCTGCCGGAACACAAGACATAGAATTTGAAAATGAGGAAGTAAATCTTTATGAGATTACT TCTGGGCGTAATTTGATGTGGCCACTTGTTTGGAAGTCAATTAAAGACGCTCCATTCTTTGGTTCTGGGCGAGAGGCTAT GCAGAATTTAGGGATTACTTTGAAAATAAAGCGAGATTATGGGGAGGCCGAAAACTTTCCTCACCCTCATAATGCTTATT TACAATGGCTTCAAGATAATGGATTTGTGGGAGCTGCTCCAGTATTTTTATTATATCTTCTATTATTAAAGTATTCATTA AGCCTTTTTCGTGATAATTCTGAAAAAATATATGTCGTCACGGGTGGGGTCTCCTTAGCCTTGTTGTTGGCTTTTTTGAT CGCATCATCAGGAAGTCAAACTTTTTATCCGAGAGAAGGTGCAGTTGCAATGTGGGTGGGGATAGGGCTCTTACTTCGAG TTTATATTGAGCGTAGCAAAAAACGCTCAGGAAAAAATAGCCCTCTTATTGATGGTTAA
Upstream 100 bases:
>100_bases GCGGTTTCTGTAACACAAGTCGATGATATTCGGTTAACAGAACGCGGTAAATCTGTTTTTGTTGATCAACGCATTAATAT TTCAAATTAGTTGATTTTTT
Downstream 100 bases:
>100_bases CATTACTTTAAAATATTGACTGTTATTCCCATTAATATTTTAATGCTTTGTGTCATCATTTTTATTTGTAACCGTATTGT TATACGCTGTTTTTTGTATA
Product: O-antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFINTVLSWYSNRKKEKLTWEMPQ IVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPGAINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLA LMLILLALQVIKAMKLGSLTIGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQSAGTQDIEFENEEVNLYEIT SGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDYGEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSL SLFRDNSEKIYVVTGGVSLALLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG
Sequences:
>Translated_472_residues MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFINTVLSWYSNRKKEKLTWEMPQ IVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPGAINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLA LMLILLALQVIKAMKLGSLTIGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQSAGTQDIEFENEEVNLYEIT SGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDYGEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSL SLFRDNSEKIYVVTGGVSLALLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG >Mature_472_residues MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFINTVLSWYSNRKKEKLTWEMPQ IVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPGAINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLA LMLILLALQVIKAMKLGSLTIGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQSAGTQDIEFENEEVNLYEIT SGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDYGEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSL SLFRDNSEKIYVVTGGVSLALLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53543; Mature: 53543
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFIN CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHH TVLSWYSNRKKEKLTWEMPQIVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPG HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC AINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLALMLILLALQVIKAMKLGSLT CHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE IGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF ECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SAGTQDIEFENEEVNLYEITSGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDY CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEECCC GEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSLSLFRDNSEKIYVVTGGVSLA CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH LLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFIN CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHH TVLSWYSNRKKEKLTWEMPQIVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPG HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC AINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLALMLILLALQVIKAMKLGSLT CHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE IGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF ECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SAGTQDIEFENEEVNLYEITSGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDY CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEECCC GEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSLSLFRDNSEKIYVVTGGVSLA CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH LLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA