Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944220

Identifier: 119944220

GI number: 119944220

Start: 560363

End: 561781

Strand: Direct

Name: 119944220

Synonym: Ping_0442

Alternate gene names: NA

Gene position: 560363-561781 (Clockwise)

Preceding gene: 119944219

Following gene: 119944221

Centisome position: 12.29

GC content: 37.56

Gene sequence:

>1419_bases
ATGATTCGTATAACACTTCTTACTTTATTGGTTGCTTATTTAAGTGCTTACGCCTGGAAAGATTGGTTTCGCGCAGCTTG
CTGGTTGGTATTGTTAATGGCGATCTTTGAGCATCCTGATATGCCTAAATCGATAGGTGGAGTCCCTGGGCTAAATCACT
GGAATTTTTTATTTATAAATACAGTTTTATCTTGGTATTCCAATAGAAAAAAAGAAAAGCTAACTTGGGAGATGCCTCAA
ATTGTTAACACCTTGTTTTTTTTATATGCATTTTTTATTTTCATTAGTTTGATTAGATACTTATATGACCATAGTGGTGT
AATTGAATTGTTTGCAACCATTGGCGCCCCTCCTCCTGGGGCTATAAATGACATCAATGAATATCTGATCAACTGTTTTA
AATGGGTGCTACCAGGAATGATTATTTTTGATGGTTGCCGCAATCGTAAGCAATATGATTTTGCCATCGGCACTTTAGCT
TTAATGTTAATATTATTGGCACTGCAAGTGATAAAAGCGATGAAATTGGGATCGCTCACAATAGGGGGAGATGCCCTGCA
GCATAAAGCGGCTAAAATCATCTCAAATAGCGTAGGCTATCATCGTGTAAATATATCAATGATGATGAGTGGGGCTTTTT
GGGTTATTTTTTGTCTAAAAGAGTTAGTTAGCACTAAGCATTATTGGTTACTGATTTTGCCTAGTTGTTTTATTGTATTC
CTGGCTATGGCTTTAACTGGAGGGCGAACTGGTTATGTTACTTGGGCTATTCTCGGGATTTTTTATTGCTTATTTAAATG
GCGAAAATATATTTTATTGGCGCCATTAATGTTTTTAGCCATAACAATGTTTGTCCCTTCTGCGATTGAGCGTCTTGGCT
TTGGTTTTTCATCTGAGCAGTCTGCCGGAACACAAGACATAGAATTTGAAAATGAGGAAGTAAATCTTTATGAGATTACT
TCTGGGCGTAATTTGATGTGGCCACTTGTTTGGAAGTCAATTAAAGACGCTCCATTCTTTGGTTCTGGGCGAGAGGCTAT
GCAGAATTTAGGGATTACTTTGAAAATAAAGCGAGATTATGGGGAGGCCGAAAACTTTCCTCACCCTCATAATGCTTATT
TACAATGGCTTCAAGATAATGGATTTGTGGGAGCTGCTCCAGTATTTTTATTATATCTTCTATTATTAAAGTATTCATTA
AGCCTTTTTCGTGATAATTCTGAAAAAATATATGTCGTCACGGGTGGGGTCTCCTTAGCCTTGTTGTTGGCTTTTTTGAT
CGCATCATCAGGAAGTCAAACTTTTTATCCGAGAGAAGGTGCAGTTGCAATGTGGGTGGGGATAGGGCTCTTACTTCGAG
TTTATATTGAGCGTAGCAAAAAACGCTCAGGAAAAAATAGCCCTCTTATTGATGGTTAA

Upstream 100 bases:

>100_bases
GCGGTTTCTGTAACACAAGTCGATGATATTCGGTTAACAGAACGCGGTAAATCTGTTTTTGTTGATCAACGCATTAATAT
TTCAAATTAGTTGATTTTTT

Downstream 100 bases:

>100_bases
CATTACTTTAAAATATTGACTGTTATTCCCATTAATATTTTAATGCTTTGTGTCATCATTTTTATTTGTAACCGTATTGT
TATACGCTGTTTTTTGTATA

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFINTVLSWYSNRKKEKLTWEMPQ
IVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPGAINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLA
LMLILLALQVIKAMKLGSLTIGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF
LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQSAGTQDIEFENEEVNLYEIT
SGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDYGEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSL
SLFRDNSEKIYVVTGGVSLALLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG

Sequences:

>Translated_472_residues
MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFINTVLSWYSNRKKEKLTWEMPQ
IVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPGAINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLA
LMLILLALQVIKAMKLGSLTIGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF
LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQSAGTQDIEFENEEVNLYEIT
SGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDYGEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSL
SLFRDNSEKIYVVTGGVSLALLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG
>Mature_472_residues
MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFINTVLSWYSNRKKEKLTWEMPQ
IVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPGAINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLA
LMLILLALQVIKAMKLGSLTIGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF
LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQSAGTQDIEFENEEVNLYEIT
SGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDYGEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSL
SLFRDNSEKIYVVTGGVSLALLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53543; Mature: 53543

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFIN
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHH
TVLSWYSNRKKEKLTWEMPQIVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPG
HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
AINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLALMLILLALQVIKAMKLGSLT
CHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF
ECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SAGTQDIEFENEEVNLYEITSGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDY
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEECCC
GEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSLSLFRDNSEKIYVVTGGVSLA
CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
LLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIRITLLTLLVAYLSAYAWKDWFRAACWLVLLMAIFEHPDMPKSIGGVPGLNHWNFLFIN
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHH
TVLSWYSNRKKEKLTWEMPQIVNTLFFLYAFFIFISLIRYLYDHSGVIELFATIGAPPPG
HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
AINDINEYLINCFKWVLPGMIIFDGCRNRKQYDFAIGTLALMLILLALQVIKAMKLGSLT
CHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IGGDALQHKAAKIISNSVGYHRVNISMMMSGAFWVIFCLKELVSTKHYWLLILPSCFIVF
ECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LAMALTGGRTGYVTWAILGIFYCLFKWRKYILLAPLMFLAITMFVPSAIERLGFGFSSEQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SAGTQDIEFENEEVNLYEITSGRNLMWPLVWKSIKDAPFFGSGREAMQNLGITLKIKRDY
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEECCC
GEAENFPHPHNAYLQWLQDNGFVGAAPVFLLYLLLLKYSLSLFRDNSEKIYVVTGGVSLA
CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
LLLAFLIASSGSQTFYPREGAVAMWVGIGLLLRVYIERSKKRSGKNSPLIDG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA