Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944211
Identifier: 119944211
GI number: 119944211
Start: 547858
End: 548982
Strand: Direct
Name: 119944211
Synonym: Ping_0432
Alternate gene names: NA
Gene position: 547858-548982 (Clockwise)
Preceding gene: 119944199
Following gene: 119944214
Centisome position: 12.02
GC content: 38.31
Gene sequence:
>1125_bases ATGTTAGTAAGCAATACTGAATCATTTGAAATTAGGGTAATTAAAAACTGGGATAATTTTGCAACGTTAAAAGAAGATTG GCAAAACCTACTTGTACAGTCTGATGCTGATAACCTGTTTCTGACTTGGGAATGGATGGATTGTTGGCGAATAGCACAAG GTGAGTTGATAACACCTTTTATTATAGTCATTCAGGATAGCCAGGGCATTCTAGCTATTGCCCCTTTTTATATACAAGAG TACCGCTTAGCTCAATTAGTTACTTACCAGGCGTTACGATTTATTGGTGATAAAGGTTCCGGCTCGGAATACTCAAACTT CATTGTTAAAAAAGAAGACGGTATTGTGCTTAAAAGCAGGCTCTGGGAGCATCTGCTTAGCCCTGAGGTTAAACCGTGTT GGGATTTTATCTGGTTCACTAATGTAAAAGCTTGGGCTGAGGGAGGGCAAACGCTGCTACAATCATTAGCTAGTGTAAAG GGGCTTAACTGCAATCAACGTACCGTAGAGTTTGCTCAGATCCCTTTAAGAAAATACTCTACTGATATATTACCTGAATT ATCCAAAAGTTTACGTGCTGATATTCGCAGACCTAGTCGTCGCCTGGATAAGTTTGGATCTTGGCAAATGCTTACTTGCA AAGGTGATGATGATATCAATGAACTTCTTGAGCAACTATTTAGCTTACATAATAAACATTGGTTAAATGCCGGATTAGGT ACCTTTCAAAGGCGCCCTGAATTAGCGGATTTTTACCGACTTTTTGTTCCTCTGGCTTTAAAAAAAGGCTGGTTGAGGTT GCTTCGACTTGAAAGTAACGGTGAAATACAGGCAATGCAGCTTGGTTATGTTTATAACAACCAATTCTTAGCCATTCAAG AGGGTTTTAATCCTGATTTTATACCTGGAGTTGGACAGGTATTACGTTATTATTCATTCACTAATTGTCAGCAAGAAGGG CTAAGCTGTTATGATTTTTTGGGTATTTATACCGATCATAAAAGGCGTTGGCTTGCTGAAAAAAAACTTGGTGCCAATCT TTTTATCTGGCGCACAAAAATGAAAAACATCCCTTTTAGTATTAAAAAAATTTGGCCTACTGGACGCTATCTAAAACCAC TTTAA
Upstream 100 bases:
>100_bases CTCCATCCGTTAATTATGAAGCATTATTATTAGATTGATTTTAAAGGTATTTAACTCTTTAAATGCCCAATCTAAATATT CGACTTATATAAGGGTTAAT
Downstream 100 bases:
>100_bases TCTCTAATTAGAGCCACTGGATAGATGTTGTAAATTGTTGGCTAGTCGTTGTCTTTCCTCTGGCGATTAAAGTGGTGATC GGCGTTCTTTGGTGATAACC
Product: cellulose biosynthesis protein CelD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MLVSNTESFEIRVIKNWDNFATLKEDWQNLLVQSDADNLFLTWEWMDCWRIAQGELITPFIIVIQDSQGILAIAPFYIQE YRLAQLVTYQALRFIGDKGSGSEYSNFIVKKEDGIVLKSRLWEHLLSPEVKPCWDFIWFTNVKAWAEGGQTLLQSLASVK GLNCNQRTVEFAQIPLRKYSTDILPELSKSLRADIRRPSRRLDKFGSWQMLTCKGDDDINELLEQLFSLHNKHWLNAGLG TFQRRPELADFYRLFVPLALKKGWLRLLRLESNGEIQAMQLGYVYNNQFLAIQEGFNPDFIPGVGQVLRYYSFTNCQQEG LSCYDFLGIYTDHKRRWLAEKKLGANLFIWRTKMKNIPFSIKKIWPTGRYLKPL
Sequences:
>Translated_374_residues MLVSNTESFEIRVIKNWDNFATLKEDWQNLLVQSDADNLFLTWEWMDCWRIAQGELITPFIIVIQDSQGILAIAPFYIQE YRLAQLVTYQALRFIGDKGSGSEYSNFIVKKEDGIVLKSRLWEHLLSPEVKPCWDFIWFTNVKAWAEGGQTLLQSLASVK GLNCNQRTVEFAQIPLRKYSTDILPELSKSLRADIRRPSRRLDKFGSWQMLTCKGDDDINELLEQLFSLHNKHWLNAGLG TFQRRPELADFYRLFVPLALKKGWLRLLRLESNGEIQAMQLGYVYNNQFLAIQEGFNPDFIPGVGQVLRYYSFTNCQQEG LSCYDFLGIYTDHKRRWLAEKKLGANLFIWRTKMKNIPFSIKKIWPTGRYLKPL >Mature_374_residues MLVSNTESFEIRVIKNWDNFATLKEDWQNLLVQSDADNLFLTWEWMDCWRIAQGELITPFIIVIQDSQGILAIAPFYIQE YRLAQLVTYQALRFIGDKGSGSEYSNFIVKKEDGIVLKSRLWEHLLSPEVKPCWDFIWFTNVKAWAEGGQTLLQSLASVK GLNCNQRTVEFAQIPLRKYSTDILPELSKSLRADIRRPSRRLDKFGSWQMLTCKGDDDINELLEQLFSLHNKHWLNAGLG TFQRRPELADFYRLFVPLALKKGWLRLLRLESNGEIQAMQLGYVYNNQFLAIQEGFNPDFIPGVGQVLRYYSFTNCQQEG LSCYDFLGIYTDHKRRWLAEKKLGANLFIWRTKMKNIPFSIKKIWPTGRYLKPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43733; Mature: 43733
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSNTESFEIRVIKNWDNFATLKEDWQNLLVQSDADNLFLTWEWMDCWRIAQGELITPF CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEEEEEHHHHHHCCCCEECEE IIVIQDSQGILAIAPFYIQEYRLAQLVTYQALRFIGDKGSGSEYSNFIVKKEDGIVLKSR EEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCEEEECCCCEEHHHH LWEHLLSPEVKPCWDFIWFTNVKAWAEGGQTLLQSLASVKGLNCNQRTVEFAQIPLRKYS HHHHHHCCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHC TDILPELSKSLRADIRRPSRRLDKFGSWQMLTCKGDDDINELLEQLFSLHNKHWLNAGLG HHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCH TFQRRPELADFYRLFVPLALKKGWLRLLRLESNGEIQAMQLGYVYNNQFLAIQEGFNPDF HHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEECCEEEEEECCCCCCC IPGVGQVLRYYSFTNCQQEGLSCYDFLGIYTDHKRRWLAEKKLGANLFIWRTKMKNIPFS CCCHHHHHHHHHHCCHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCEE IKKIWPTGRYLKPL EEEECCCCCCCCCC >Mature Secondary Structure MLVSNTESFEIRVIKNWDNFATLKEDWQNLLVQSDADNLFLTWEWMDCWRIAQGELITPF CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEEEEEHHHHHHCCCCEECEE IIVIQDSQGILAIAPFYIQEYRLAQLVTYQALRFIGDKGSGSEYSNFIVKKEDGIVLKSR EEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCEEEECCCCEEHHHH LWEHLLSPEVKPCWDFIWFTNVKAWAEGGQTLLQSLASVKGLNCNQRTVEFAQIPLRKYS HHHHHHCCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHC TDILPELSKSLRADIRRPSRRLDKFGSWQMLTCKGDDDINELLEQLFSLHNKHWLNAGLG HHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCH TFQRRPELADFYRLFVPLALKKGWLRLLRLESNGEIQAMQLGYVYNNQFLAIQEGFNPDF HHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEECCEEEEEECCCCCCC IPGVGQVLRYYSFTNCQQEGLSCYDFLGIYTDHKRRWLAEKKLGANLFIWRTKMKNIPFS CCCHHHHHHHHHHCCHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCEE IKKIWPTGRYLKPL EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA