Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is wcaL [C]

Identifier: 119944121

GI number: 119944121

Start: 436339

End: 437538

Strand: Direct

Name: wcaL [C]

Synonym: Ping_0336

Alternate gene names: 119944121

Gene position: 436339-437538 (Clockwise)

Preceding gene: 119944115

Following gene: 119944122

Centisome position: 9.57

GC content: 36.67

Gene sequence:

>1200_bases
ATGCAATTATTTAAAGTGGGATCTCAACTTAGACCTGTAAGTTCATATATACCAAAGATGTTTTTCCAAACAGGTAAGGT
ATATGTGTATACCTTAATTATGAGTGGATTAAATATGAATATTCTTGAACTTTGTTTGTCAGATTCGTTAGGTGGCTTAG
AGCTGCATTTCAGAGATTTTTCTGTTTGGTTAGATGAACAACAGAGTTCTGAGGGGCGAATTTTTGTTGCAACAAGATCA
GAAACACCTTTAGCAAGCCGAATGGAAAGTGATCTTTGCTTAACTAACCGTAACTTATGGCATGCCGCCAGATTGTCAAA
ATTTATATCAGCAAATAAAATTGACGTTGTACATATTCATGATAAAAAAGATCTGCCTTTGCTGGCTTTGGTCAAATCAA
TCTGTTCTTACCCGTTTAAACTTGCGCATACTCGCCATATGTCTTTACCGGGGGGGAAACGTGATTTTTACCATAGCTGG
CTGTATGGCAAAGTAGATGCTTATTTTGTGATTACAGAATGGATGAAATCACAGGTGATTAATAATTTACCTCTCGCGCC
TGAAAAAATTCATAAAATAAATTTGGGAACTGCTGTTGTTGAGCGCTGCAGTGAGACTGAACTTTCTGAACTGAAAGATA
ATATTTTTTCTGAGCATCAGGGGTTATGGTTGGCTAATATTGCGCGCATTCAGCATGGTAAAGGCCAACATGTTTTTTTA
GATGCTATTAAGCAATTAAAAGATAAAGGAATTCAAGTGGCCGGCGTCATTGCCGGTGGGACGGATGACCCTCAATATGT
AAAACAGCTTGAAGATTATATTGAGCTGCACCAGCTTAAAGTGAAAATATTTGGTCATCGTGATGATATTCCAGTCCTTA
TTCAAGCGATGGATGCTGTGGTATTAACCACTGAATGCGAAACATTTGGCTTGATTATGATTGAAGCTATGATGGCGGGG
GTAGTTGCTATTGGCTCCAATTCAGGCGGAGTGCCTGAAATTATTGATCATCTTGAAAATGGATTGCTGTTCAATGTATT
TGATCCTCAAGATTTGTCCAAACAGATTCAATTATTGGATTTATCCAGCGAGTTAAAAGAAAAATTAGCATTGAAAGGAC
AACAAAAAGCATTACAGCGCTTTGAAAAGAAAAAACAATTTTTAGCGTTTAAAGAAAAGTTATTAAATTTAGAAGAATGA

Upstream 100 bases:

>100_bases
CTATACTGCTGCCGATAAAACCTGCACCACCTGTAACTATAAACATGTTCTCACCTCCGCATGGAATCTAATTTAATATA
AAAATTGTTGTCATTATACC

Downstream 100 bases:

>100_bases
AAGATCGATATTTTTTGAAAGTTTCCAGATTTAAAAAGCACTATTTGGGACGTTATTTTGGGCTAGGGGATATTTAGCCC
ACCCCTTTGAGCCTGAGACC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyltransferase WalR; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase WbaZ; A-Glycosyltransferase; Group 1 Family Glycosyl Transferase; Galactosyltransferase

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MQLFKVGSQLRPVSSYIPKMFFQTGKVYVYTLIMSGLNMNILELCLSDSLGGLELHFRDFSVWLDEQQSSEGRIFVATRS
ETPLASRMESDLCLTNRNLWHAARLSKFISANKIDVVHIHDKKDLPLLALVKSICSYPFKLAHTRHMSLPGGKRDFYHSW
LYGKVDAYFVITEWMKSQVINNLPLAPEKIHKINLGTAVVERCSETELSELKDNIFSEHQGLWLANIARIQHGKGQHVFL
DAIKQLKDKGIQVAGVIAGGTDDPQYVKQLEDYIELHQLKVKIFGHRDDIPVLIQAMDAVVLTTECETFGLIMIEAMMAG
VVAIGSNSGGVPEIIDHLENGLLFNVFDPQDLSKQIQLLDLSSELKEKLALKGQQKALQRFEKKKQFLAFKEKLLNLEE

Sequences:

>Translated_399_residues
MQLFKVGSQLRPVSSYIPKMFFQTGKVYVYTLIMSGLNMNILELCLSDSLGGLELHFRDFSVWLDEQQSSEGRIFVATRS
ETPLASRMESDLCLTNRNLWHAARLSKFISANKIDVVHIHDKKDLPLLALVKSICSYPFKLAHTRHMSLPGGKRDFYHSW
LYGKVDAYFVITEWMKSQVINNLPLAPEKIHKINLGTAVVERCSETELSELKDNIFSEHQGLWLANIARIQHGKGQHVFL
DAIKQLKDKGIQVAGVIAGGTDDPQYVKQLEDYIELHQLKVKIFGHRDDIPVLIQAMDAVVLTTECETFGLIMIEAMMAG
VVAIGSNSGGVPEIIDHLENGLLFNVFDPQDLSKQIQLLDLSSELKEKLALKGQQKALQRFEKKKQFLAFKEKLLNLEE
>Mature_399_residues
MQLFKVGSQLRPVSSYIPKMFFQTGKVYVYTLIMSGLNMNILELCLSDSLGGLELHFRDFSVWLDEQQSSEGRIFVATRS
ETPLASRMESDLCLTNRNLWHAARLSKFISANKIDVVHIHDKKDLPLLALVKSICSYPFKLAHTRHMSLPGGKRDFYHSW
LYGKVDAYFVITEWMKSQVINNLPLAPEKIHKINLGTAVVERCSETELSELKDNIFSEHQGLWLANIARIQHGKGQHVFL
DAIKQLKDKGIQVAGVIAGGTDDPQYVKQLEDYIELHQLKVKIFGHRDDIPVLIQAMDAVVLTTECETFGLIMIEAMMAG
VVAIGSNSGGVPEIIDHLENGLLFNVFDPQDLSKQIQLLDLSSELKEKLALKGQQKALQRFEKKKQFLAFKEKLLNLEE

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 45166; Mature: 45166

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFKVGSQLRPVSSYIPKMFFQTGKVYVYTLIMSGLNMNILELCLSDSLGGLELHFRDF
CCHHHCCCCCCHHHHHHHHHHHHCCCHHEEEHHHCCCCHHHHHHHHHCCCCCEEEEEEEE
SVWLDEQQSSEGRIFVATRSETPLASRMESDLCLTNRNLWHAARLSKFISANKIDVVHIH
EEEECCCCCCCCEEEEEECCCCCHHHHHCCCCEECCCCHHHHHHHHHHHCCCCEEEEEEC
DKKDLPLLALVKSICSYPFKLAHTRHMSLPGGKRDFYHSWLYGKVDAYFVITEWMKSQVI
CCCCCCHHHHHHHHHCCCCHHHCEEECCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHH
NNLPLAPEKIHKINLGTAVVERCSETELSELKDNIFSEHQGLWLANIARIQHGKGQHVFL
HCCCCCHHHHHEECCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
DAIKQLKDKGIQVAGVIAGGTDDPQYVKQLEDYIELHQLKVKIFGHRDDIPVLIQAMDAV
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHE
VLTTECETFGLIMIEAMMAGVVAIGSNSGGVPEIIDHLENGLLFNVFDPQDLSKQIQLLD
EEEECCCHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
LSSELKEKLALKGQQKALQRFEKKKQFLAFKEKLLNLEE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLFKVGSQLRPVSSYIPKMFFQTGKVYVYTLIMSGLNMNILELCLSDSLGGLELHFRDF
CCHHHCCCCCCHHHHHHHHHHHHCCCHHEEEHHHCCCCHHHHHHHHHCCCCCEEEEEEEE
SVWLDEQQSSEGRIFVATRSETPLASRMESDLCLTNRNLWHAARLSKFISANKIDVVHIH
EEEECCCCCCCCEEEEEECCCCCHHHHHCCCCEECCCCHHHHHHHHHHHCCCCEEEEEEC
DKKDLPLLALVKSICSYPFKLAHTRHMSLPGGKRDFYHSWLYGKVDAYFVITEWMKSQVI
CCCCCCHHHHHHHHHCCCCHHHCEEECCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHH
NNLPLAPEKIHKINLGTAVVERCSETELSELKDNIFSEHQGLWLANIARIQHGKGQHVFL
HCCCCCHHHHHEECCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
DAIKQLKDKGIQVAGVIAGGTDDPQYVKQLEDYIELHQLKVKIFGHRDDIPVLIQAMDAV
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHE
VLTTECETFGLIMIEAMMAGVVAIGSNSGGVPEIIDHLENGLLFNVFDPQDLSKQIQLLD
EEEECCCHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
LSSELKEKLALKGQQKALQRFEKKKQFLAFKEKLLNLEE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA