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The map label for this gene is hypC [H]

Identifier: 119900091

GI number: 119900091

Start: 4161767

End: 4162006

Strand: Direct

Name: hypC [H]

Synonym: azo3802

Alternate gene names: 119900091

Gene position: 4161767-4162006 (Clockwise)

Preceding gene: 119900090

Following gene: 119900092

Centisome position: 95.1

GC content: 68.33

Gene sequence:

>240_bases
ATGTGCCTTGCCGTCCCTGCCCGCGTTGCGGAACTGCTCCCCAACGACACCGCCCGCGTCGAACTCGGCGGCGTCACCAA
GGAAATCTCGCTTGCGCTGGTCGATGAGGTCGTGGTGGGCGACTACGTCATCGTCCACGTCGGCTACGCGCTCTCCAAGC
TCGACCGCGAGGAGGCCGAGGCCACGCTGGCGCTGTTCGCCGAAGCCGGGCTGACGCCCTCGCTGGAGGGCGCGCAATGA

Upstream 100 bases:

>100_bases
ACCGTGCTGGAGGCCCGCCAGGTGCCACCCAACGACGGCGGCCTCGCACTCGGGCAGGCGCACGTCGCCCGCCATCTGCT
GACCGAAGGAATCTGATCCG

Downstream 100 bases:

>100_bases
AGTACGTGGACGAATTCCGCGACGGCGAACTCGCCCGCGGCCTTGGCGAGGCGATCCGGCGCGAGGCCGATCCCGGCCGC
CACTACGCCTTCATGGAGTT

Product: hydrogenase assembly chaperon HypC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MCLAVPARVAELLPNDTARVELGGVTKEISLALVDEVVVGDYVIVHVGYALSKLDREEAEATLALFAEAGLTPSLEGAQ

Sequences:

>Translated_79_residues
MCLAVPARVAELLPNDTARVELGGVTKEISLALVDEVVVGDYVIVHVGYALSKLDREEAEATLALFAEAGLTPSLEGAQ
>Mature_79_residues
MCLAVPARVAELLPNDTARVELGGVTKEISLALVDEVVVGDYVIVHVGYALSKLDREEAEATLALFAEAGLTPSLEGAQ

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8280; Mature: 8280

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAVPARVAELLPNDTARVELGGVTKEISLALVDEVVVGDYVIVHVGYALSKLDREEAE
CCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHCHHHHH
ATLALFAEAGLTPSLEGAQ
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCLAVPARVAELLPNDTARVELGGVTKEISLALVDEVVVGDYVIVHVGYALSKLDREEAE
CCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHCHHHHH
ATLALFAEAGLTPSLEGAQ
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8326860 [H]