| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ytfP [H]
Identifier: 119900061
GI number: 119900061
Start: 4132342
End: 4133625
Strand: Direct
Name: ytfP [H]
Synonym: azo3772
Alternate gene names: 119900061
Gene position: 4132342-4133625 (Clockwise)
Preceding gene: 119900060
Following gene: 119900064
Centisome position: 94.43
GC content: 74.77
Gene sequence:
>1284_bases ATGGCCGATCACCCGAGCCCGACCGCCGCGCGTGTCAGCGTCATCGGCGGCGGCCCCGCCGGCCTGATCGCCGCCGAGGT GCTGGCCGCCGCCGGCGCCGAGGTCACCGTCCATGAGGCCATGCCCTCGGTCGGGCGCAAGTTCCTGCTCGCCGGCCGCG GCGGCCTCAACCTCACCCATTCCGAGCCAACCGAGGCCTTTCTCGGCCGTTACGGCCAGCGCCGCGACACGCTCGCGCCG CTGCTCGCCGAGTTTGGCGCCGACGCGCTCCGGGCATGGGCCGATGCGCTCGGCGCGCAGACCTTCGTCGGCAGCTCCGG CCGCGTCTTTCCGGCCGAGATGAAGGCGGCGCCGCTGCTGCGCGCGTGGCTGGCGCGGCTGCGCGCGGCGGGCGTGCGTT TCGCGGTGCGCGAGCGCTGGCTGGGCTGGGCGGAAGACGGCGCGCTGCGCTTTCGCAACCCCGAACGCGAACACCGTGTG AAGGCCGACGCGGTGGTGCTGGCGCTGGGCGGTGGCAGCTGGGCGAAGTTCGGCGCCGACGGCGCCTGGGTCGGCCTGCT GCGCGACGCGGGCGTCGCCGTGGCCGAGCTGCGCCCCGCCAACTGCGGCTTCGAGGTCGGCGCCCGCGGCGCCGAGGGCC AAGGCTGGAGCCCGCATTTCCGCGAACGTTATGCCGGCGAACCGCTGAAAGCGGTGCGCCTGACGTTCACCGCGGCCGAC GGCAGCCGCCACGAGCGCGCGGGCGAATTCGTCATCAGCGCCGAGGGGATCGAAGGCAGCCTGATCTACGCGCTGTCCGC TCCGCTGCGCGACACCATCGCCGCGCGCGGCGAGGCCACAGTCCATCTCGATCTCGCCCCCGGCCGCAGCCTGGAGCGGC TGCGCACCGAACTCGCGCGGCCGCGCGGCCACCGCTCGATGGCGAGCCATCTGCAGGGCCAGGCGGGAATCAAGGGGGTG AAGGCGGGGCTGCTGCGCGAGTTGGCGACGGCGGAGGACTTCGCCGATCCGGCGCGGCTCGCCGCGGCGATCAAGGCGCT GCCGCTGCGCCTGGTGGCGACGCGGCCGCTGGACGAGGCGATCAGCGTCGCCGGCGGGGTGGAATTCGGCGCGCTCGACG ACGGCCTGATGCTGAAATCACACCCCGGCGTGTTCTGCGCCGGGGAAATGCTGGACTGGGAGGCACCGACCGGCGGCTAC CTGCTCACCGCCTGCTTCGCCACCGGCTACCGCGCCGGCCACGCCGCGGCAGCCTGGCTGGCGGACCCTCGCGCTCCCGC CTGA
Upstream 100 bases:
>100_bases CGGCGGCCTTTCGCGCCCGCTTCAGCTAAGCGGGCGCGCGGCGGCCGCGCCGCCGTACAATGCCGCCCCCTCCCGCATTG CCCGACAGGATGACCTTTCC
Downstream 100 bases:
>100_bases ATCCGCTTCAGCCGTTGCAGCTGACCGCGCGGAATTCGACCCGGCGGTCGAGCGAGTCGCGCACGTCGTCGGTGCCGGAA CCGACGATGTTCTGCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MADHPSPTAARVSVIGGGPAGLIAAEVLAAAGAEVTVHEAMPSVGRKFLLAGRGGLNLTHSEPTEAFLGRYGQRRDTLAP LLAEFGADALRAWADALGAQTFVGSSGRVFPAEMKAAPLLRAWLARLRAAGVRFAVRERWLGWAEDGALRFRNPEREHRV KADAVVLALGGGSWAKFGADGAWVGLLRDAGVAVAELRPANCGFEVGARGAEGQGWSPHFRERYAGEPLKAVRLTFTAAD GSRHERAGEFVISAEGIEGSLIYALSAPLRDTIAARGEATVHLDLAPGRSLERLRTELARPRGHRSMASHLQGQAGIKGV KAGLLRELATAEDFADPARLAAAIKALPLRLVATRPLDEAISVAGGVEFGALDDGLMLKSHPGVFCAGEMLDWEAPTGGY LLTACFATGYRAGHAAAAWLADPRAPA
Sequences:
>Translated_427_residues MADHPSPTAARVSVIGGGPAGLIAAEVLAAAGAEVTVHEAMPSVGRKFLLAGRGGLNLTHSEPTEAFLGRYGQRRDTLAP LLAEFGADALRAWADALGAQTFVGSSGRVFPAEMKAAPLLRAWLARLRAAGVRFAVRERWLGWAEDGALRFRNPEREHRV KADAVVLALGGGSWAKFGADGAWVGLLRDAGVAVAELRPANCGFEVGARGAEGQGWSPHFRERYAGEPLKAVRLTFTAAD GSRHERAGEFVISAEGIEGSLIYALSAPLRDTIAARGEATVHLDLAPGRSLERLRTELARPRGHRSMASHLQGQAGIKGV KAGLLRELATAEDFADPARLAAAIKALPLRLVATRPLDEAISVAGGVEFGALDDGLMLKSHPGVFCAGEMLDWEAPTGGY LLTACFATGYRAGHAAAAWLADPRAPA >Mature_426_residues ADHPSPTAARVSVIGGGPAGLIAAEVLAAAGAEVTVHEAMPSVGRKFLLAGRGGLNLTHSEPTEAFLGRYGQRRDTLAPL LAEFGADALRAWADALGAQTFVGSSGRVFPAEMKAAPLLRAWLARLRAAGVRFAVRERWLGWAEDGALRFRNPEREHRVK ADAVVLALGGGSWAKFGADGAWVGLLRDAGVAVAELRPANCGFEVGARGAEGQGWSPHFRERYAGEPLKAVRLTFTAADG SRHERAGEFVISAEGIEGSLIYALSAPLRDTIAARGEATVHLDLAPGRSLERLRTELARPRGHRSMASHLQGQAGIKGVK AGLLRELATAEDFADPARLAAAIKALPLRLVATRPLDEAISVAGGVEFGALDDGLMLKSHPGVFCAGEMLDWEAPTGGYL LTACFATGYRAGHAAAAWLADPRAPA
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 44813; Mature: 44681
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHPSPTAARVSVIGGGPAGLIAAEVLAAAGAEVTVHEAMPSVGRKFLLAGRGGLNLTH CCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCEEEEECCCCCCCCC SEPTEAFLGRYGQRRDTLAPLLAEFGADALRAWADALGAQTFVGSSGRVFPAEMKAAPLL CCCHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHH RAWLARLRAAGVRFAVRERWLGWAEDGALRFRNPEREHRVKADAVVLALGGGSWAKFGAD HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCEEEEEECCCCCHHCCCC GAWVGLLRDAGVAVAELRPANCGFEVGARGAEGQGWSPHFRERYAGEPLKAVRLTFTAAD CCEEEHHHHCCEEEEEECCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECC GSRHERAGEFVISAEGIEGSLIYALSAPLRDTIAARGEATVHLDLAPGRSLERLRTELAR CCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHC PRGHRSMASHLQGQAGIKGVKAGLLRELATAEDFADPARLAAAIKALPLRLVATRPLDEA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCHHHH ISVAGGVEFGALDDGLMLKSHPGVFCAGEMLDWEAPTGGYLLTACFATGYRAGHAAAAWL HHHHCCCEECCCCCCEEEECCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHH ADPRAPA CCCCCCC >Mature Secondary Structure ADHPSPTAARVSVIGGGPAGLIAAEVLAAAGAEVTVHEAMPSVGRKFLLAGRGGLNLTH CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCEEEEECCCCCCCCC SEPTEAFLGRYGQRRDTLAPLLAEFGADALRAWADALGAQTFVGSSGRVFPAEMKAAPLL CCCHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHH RAWLARLRAAGVRFAVRERWLGWAEDGALRFRNPEREHRVKADAVVLALGGGSWAKFGAD HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCEEEEEECCCCCHHCCCC GAWVGLLRDAGVAVAELRPANCGFEVGARGAEGQGWSPHFRERYAGEPLKAVRLTFTAAD CCEEEHHHHCCEEEEEECCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECC GSRHERAGEFVISAEGIEGSLIYALSAPLRDTIAARGEATVHLDLAPGRSLERLRTELAR CCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHC PRGHRSMASHLQGQAGIKGVKAGLLRELATAEDFADPARLAAAIKALPLRLVATRPLDEA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCHHHH ISVAGGVEFGALDDGLMLKSHPGVFCAGEMLDWEAPTGGYLLTACFATGYRAGHAAAAWL HHHHCCCEECCCCCCEEEECCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHH ADPRAPA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]