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The map label for this gene is 119900051

Identifier: 119900051

GI number: 119900051

Start: 4120286

End: 4121464

Strand: Direct

Name: 119900051

Synonym: azo3762

Alternate gene names: NA

Gene position: 4120286-4121464 (Clockwise)

Preceding gene: 119900050

Following gene: 119900052

Centisome position: 94.16

GC content: 70.06

Gene sequence:

>1179_bases
ATGAACCCCAAGCTGACCGAACGCATCCGGCGCCCCGGTCCGAAGAAGATCCTCGCCTGCGACGGCGGCGGCATCCTCGG
TCTGGTCAGCGTCGAAATCCTCACCCGCCTCGAAACCGACCTGCGCCGCGAACTGGACCAGCCCGAGCTGGTGCTGGGCG
ACTGGTTCGACTTCACCTGCGGCACCAGCACCGGCGCGATCATCGCCGCGTGCATCGCCGCCGGCATGAGCATGGCGCGC
ATCGGCCGCTTCTACACCGAAAGCGGCGGCCAGATGTTCGACCGCGCCGCGCTGTTCAAGCGTCTGCGCTACAGCTATGA
CGACGAACCGCTGGCGGCGAAGCTGCGCAGCGAGTTCGACGCCGCGCTCGGGCACCAGCCGAGCACGGCGGAACCCCATG
CGACGCTCGGCTCGCCGGCGCTGCGCACGCTGCTGATGATGGTGATGCGCAACCACAGCACCGATTCGCCCTGGCCGGTG
TGCAACAACCCGGACGCGCGCTACAACGACAGCGGGCGCCGCGACTGCAATCTGCGCCTGCCGCTATGGCAGCTGGTGCG
CGCGAGCACCGCGGCGCCCACCTTCTTCCCGCCGGAGGTCGTGAGCTTTGCCGAGGGCACGCCGCAGGCCTACCGCTTCG
TGTTCGTCGACGGCGGCGTCACCACCTACAACAACCCCGCCTTCCTCGCCTTCCAGATGGCCACCGCGCGGCCCTACGCG
ATCAACTGGCCGACCGGCACCGGGCAGCTGCTTGTCGTCTCGGTGGGCACCGGCACCGCGCCCCGCCTGCGCCCCGATCT
GCAGGCCGACGACCTGTGGCTGCTCGACCACGCCAAGAACATTCCGGGCGCGCTGATGAATGCCGCCTCGGCAGGCTGGG
ACATGGCCTGCCGGATGCTGGGCGAATGCCGCCATGGCGGCCTCCTCGACCGCGAGATCGGCACCATGGTGTCGGCGCCC
GGCGAGCCGCCGAACTGGAGCGGTCCCAAGCTCTTCAGCTACGTGCGCTACGACCCGGACGTGAGCCGCGCCGGCCTGGA
CGCGCTCGGCTTGAGCGACGTCGCCGAGGCCGACGTGCAGCGGCTGGACGCGATCGACCGCCTGCCGGCGATCCAGCGTC
TGGGTCGCCGCTACGCCGAAGCCAATGTACGGCTGGCGCACCTGCACGGCTTCGTCTGA

Upstream 100 bases:

>100_bases
TGGCAGCCGTTCGCGAGCGCGCAGGCGAAGTCATCGTGATCCCGCCCTGAGCGCGATCCGGATCGATAAGGCCCGCGCAA
CGGGCCACGTGGAGGCAGAC

Downstream 100 bases:

>100_bases
GGGGGGCGGCGCGCATGGCGAAGGGCACCTGCTTCGTGATCCAGGGCTTCGGCAAGAAGACCGACTACACGGACGGCCGC
ATCCTCGACCTCGACGCGTC

Product: patatin-like protein

Products: NA

Alternate protein names: Patatin-Like Protein

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MNPKLTERIRRPGPKKILACDGGGILGLVSVEILTRLETDLRRELDQPELVLGDWFDFTCGTSTGAIIAACIAAGMSMAR
IGRFYTESGGQMFDRAALFKRLRYSYDDEPLAAKLRSEFDAALGHQPSTAEPHATLGSPALRTLLMMVMRNHSTDSPWPV
CNNPDARYNDSGRRDCNLRLPLWQLVRASTAAPTFFPPEVVSFAEGTPQAYRFVFVDGGVTTYNNPAFLAFQMATARPYA
INWPTGTGQLLVVSVGTGTAPRLRPDLQADDLWLLDHAKNIPGALMNAASAGWDMACRMLGECRHGGLLDREIGTMVSAP
GEPPNWSGPKLFSYVRYDPDVSRAGLDALGLSDVAEADVQRLDAIDRLPAIQRLGRRYAEANVRLAHLHGFV

Sequences:

>Translated_392_residues
MNPKLTERIRRPGPKKILACDGGGILGLVSVEILTRLETDLRRELDQPELVLGDWFDFTCGTSTGAIIAACIAAGMSMAR
IGRFYTESGGQMFDRAALFKRLRYSYDDEPLAAKLRSEFDAALGHQPSTAEPHATLGSPALRTLLMMVMRNHSTDSPWPV
CNNPDARYNDSGRRDCNLRLPLWQLVRASTAAPTFFPPEVVSFAEGTPQAYRFVFVDGGVTTYNNPAFLAFQMATARPYA
INWPTGTGQLLVVSVGTGTAPRLRPDLQADDLWLLDHAKNIPGALMNAASAGWDMACRMLGECRHGGLLDREIGTMVSAP
GEPPNWSGPKLFSYVRYDPDVSRAGLDALGLSDVAEADVQRLDAIDRLPAIQRLGRRYAEANVRLAHLHGFV
>Mature_392_residues
MNPKLTERIRRPGPKKILACDGGGILGLVSVEILTRLETDLRRELDQPELVLGDWFDFTCGTSTGAIIAACIAAGMSMAR
IGRFYTESGGQMFDRAALFKRLRYSYDDEPLAAKLRSEFDAALGHQPSTAEPHATLGSPALRTLLMMVMRNHSTDSPWPV
CNNPDARYNDSGRRDCNLRLPLWQLVRASTAAPTFFPPEVVSFAEGTPQAYRFVFVDGGVTTYNNPAFLAFQMATARPYA
INWPTGTGQLLVVSVGTGTAPRLRPDLQADDLWLLDHAKNIPGALMNAASAGWDMACRMLGECRHGGLLDREIGTMVSAP
GEPPNWSGPKLFSYVRYDPDVSRAGLDALGLSDVAEADVQRLDAIDRLPAIQRLGRRYAEANVRLAHLHGFV

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17565150, Length=287, Percent_Identity=29.9651567944251, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI32566887, Length=287, Percent_Identity=29.9651567944251, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193208905, Length=287, Percent_Identity=29.9651567944251, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42918; Mature: 42918

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKLTERIRRPGPKKILACDGGGILGLVSVEILTRLETDLRRELDQPELVLGDWFDFTC
CCCHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
GTSTGAIIAACIAAGMSMARIGRFYTESGGQMFDRAALFKRLRYSYDDEPLAAKLRSEFD
CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AALGHQPSTAEPHATLGSPALRTLLMMVMRNHSTDSPWPVCNNPDARYNDSGRRDCNLRL
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
PLWQLVRASTAAPTFFPPEVVSFAEGTPQAYRFVFVDGGVTTYNNPAFLAFQMATARPYA
HHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEECCEEEECCCEEEEEEEECCCCEE
INWPTGTGQLLVVSVGTGTAPRLRPDLQADDLWLLDHAKNIPGALMNAASAGWDMACRML
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHCCCCCHHHHHHHCCCHHHHHHHH
GECRHGGLLDREIGTMVSAPGEPPNWSGPKLFSYVRYDPDVSRAGLDALGLSDVAEADVQ
HHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCHHHCCCCCCCCHHHHHHHHH
RLDAIDRLPAIQRLGRRYAEANVRLAHLHGFV
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
>Mature Secondary Structure
MNPKLTERIRRPGPKKILACDGGGILGLVSVEILTRLETDLRRELDQPELVLGDWFDFTC
CCCHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
GTSTGAIIAACIAAGMSMARIGRFYTESGGQMFDRAALFKRLRYSYDDEPLAAKLRSEFD
CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AALGHQPSTAEPHATLGSPALRTLLMMVMRNHSTDSPWPVCNNPDARYNDSGRRDCNLRL
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
PLWQLVRASTAAPTFFPPEVVSFAEGTPQAYRFVFVDGGVTTYNNPAFLAFQMATARPYA
HHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEECCEEEECCCEEEEEEEECCCCEE
INWPTGTGQLLVVSVGTGTAPRLRPDLQADDLWLLDHAKNIPGALMNAASAGWDMACRML
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHCCCCCHHHHHHHCCCHHHHHHHH
GECRHGGLLDREIGTMVSAPGEPPNWSGPKLFSYVRYDPDVSRAGLDALGLSDVAEADVQ
HHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCHHHCCCCCCCCHHHHHHHHH
RLDAIDRLPAIQRLGRRYAEANVRLAHLHGFV
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA