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The map label for this gene is ompW [H]

Identifier: 119900030

GI number: 119900030

Start: 4097017

End: 4097757

Strand: Direct

Name: ompW [H]

Synonym: azo3741

Alternate gene names: 119900030

Gene position: 4097017-4097757 (Clockwise)

Preceding gene: 119900029

Following gene: 119900033

Centisome position: 93.62

GC content: 64.78

Gene sequence:

>741_bases
ATGGCGGGCGGCCAACATCGGCCGTCCAATGACTGGAGTCAGTCCATGCTCAAACAACTCATCACCGCATCCCTGGCCGC
TCTCGCCCTTACCGCACCCGCCGTACACGCCCATGAGGCAGGGGAGATCATCGTCCGCGCCGGCGCCGCCAATGTTTCGC
CGGTCGAGGACAGTTCGCGCCTGAAGGTGGGCGGTGCCGGGGTCCCGGGCACGCAAGCCACCCTGAACGACAACACCCAG
CTGGGCCTGACCGCCGGCTACATGATCACCGACCACATCGGTATCGAACTGCTGGCGGCCACCCCGTTCACCCACCGGAT
CGGAGTCAAGGGCGTCGATGCCGCGCTCGGCGTGCCCGCCGGCACCATCGACGGCAAGTTCGGCGACACCAAGCACCTGC
CGCCGACGATCAGCCTGCAGTACTACCCGCTGGACGGCAAATCGCGCATCCAGCCGTATGTCGGTGCGGGCCTGAACTAC
ACCTGGTTCTTCGATGAAAAGCTCAGCAGCCGGCAGAAGGCCAACGGCTTCAGCGACCTGAAGCTGGACAACTCCTTCGG
CCTCGCGCTCCAGCTCGGCATGGACGTGCAGATCACCGACAAGCTGCTGTTCAACGTGGCTGTGTGGCGCATGGACATCG
ACACCACCGCCACCGTGCGCCACAGCGCGCTCGGCAAGGTGAAGGTCGATGTGGATGTCGACCCGTGGGTGTACATGGTG
GGCGTGGGCTACAAGTTCTGA

Upstream 100 bases:

>100_bases
GTTTACCGCGCCCGCTCCTGCGCCACCGAACGCAGGTTTACCCTTACGAATTTAGTGTTAGTTGAGTCAAATCAAGATGG
GTATCGCGGGGATGCCTAGC

Downstream 100 bases:

>100_bases
GCCTTGCCCCCGCTGCGGGCGGACCTCGCCCGGCCCGCAGCATCTTCGCCGCCGCTGGCGGCGGCGAAACACCCGCTCTG
GATCAGCGGAAAACGATGGT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAGGQHRPSNDWSQSMLKQLITASLAALALTAPAVHAHEAGEIIVRAGAANVSPVEDSSRLKVGGAGVPGTQATLNDNTQ
LGLTAGYMITDHIGIELLAATPFTHRIGVKGVDAALGVPAGTIDGKFGDTKHLPPTISLQYYPLDGKSRIQPYVGAGLNY
TWFFDEKLSSRQKANGFSDLKLDNSFGLALQLGMDVQITDKLLFNVAVWRMDIDTTATVRHSALGKVKVDVDVDPWVYMV
GVGYKF

Sequences:

>Translated_246_residues
MAGGQHRPSNDWSQSMLKQLITASLAALALTAPAVHAHEAGEIIVRAGAANVSPVEDSSRLKVGGAGVPGTQATLNDNTQ
LGLTAGYMITDHIGIELLAATPFTHRIGVKGVDAALGVPAGTIDGKFGDTKHLPPTISLQYYPLDGKSRIQPYVGAGLNY
TWFFDEKLSSRQKANGFSDLKLDNSFGLALQLGMDVQITDKLLFNVAVWRMDIDTTATVRHSALGKVKVDVDVDPWVYMV
GVGYKF
>Mature_245_residues
AGGQHRPSNDWSQSMLKQLITASLAALALTAPAVHAHEAGEIIVRAGAANVSPVEDSSRLKVGGAGVPGTQATLNDNTQL
GLTAGYMITDHIGIELLAATPFTHRIGVKGVDAALGVPAGTIDGKFGDTKHLPPTISLQYYPLDGKSRIQPYVGAGLNYT
WFFDEKLSSRQKANGFSDLKLDNSFGLALQLGMDVQITDKLLFNVAVWRMDIDTTATVRHSALGKVKVDVDVDPWVYMVG
VGYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=234, Percent_Identity=44.017094017094, Blast_Score=182, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 26263; Mature: 26132

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGQHRPSNDWSQSMLKQLITASLAALALTAPAVHAHEAGEIIVRAGAANVSPVEDSSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCE
LKVGGAGVPGTQATLNDNTQLGLTAGYMITDHIGIELLAATPFTHRIGVKGVDAALGVPA
EEECCCCCCCCCEEECCCCEEEEEECEEEEECCCEEEEEECCCHHCCCCCCCCHHHCCCC
GTIDGKFGDTKHLPPTISLQYYPLDGKSRIQPYVGAGLNYTWFFDEKLSSRQKANGFSDL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCEEEEECHHHHHHHHCCCCCCE
KLDNSFGLALQLGMDVQITDKLLFNVAVWRMDIDTTATVRHSALGKVKVDVDVDPWVYMV
EECCCCCEEEEECCCEEEHHHHEEEEEEEEEECCCCHHHHHCCCCEEEEEECCCCEEEEE
GVGYKF
ECCCCC
>Mature Secondary Structure 
AGGQHRPSNDWSQSMLKQLITASLAALALTAPAVHAHEAGEIIVRAGAANVSPVEDSSR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCE
LKVGGAGVPGTQATLNDNTQLGLTAGYMITDHIGIELLAATPFTHRIGVKGVDAALGVPA
EEECCCCCCCCCEEECCCCEEEEEECEEEEECCCEEEEEECCCHHCCCCCCCCHHHCCCC
GTIDGKFGDTKHLPPTISLQYYPLDGKSRIQPYVGAGLNYTWFFDEKLSSRQKANGFSDL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCEEEEECHHHHHHHHCCCCCCE
KLDNSFGLALQLGMDVQITDKLLFNVAVWRMDIDTTATVRHSALGKVKVDVDVDPWVYMV
EECCCCCEEEEECCCEEEHHHHEEEEEEEEEECCCCHHHHHCCCCEEEEEECCCCEEEEE
GVGYKF
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]