Definition | Azoarcus sp. BH72 chromosome, complete genome. |
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Accession | NC_008702 |
Length | 4,376,040 |
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The map label for this gene is ascD [H]
Identifier: 119899785
GI number: 119899785
Start: 3837056
End: 3838075
Strand: Direct
Name: ascD [H]
Synonym: azo3496
Alternate gene names: 119899785
Gene position: 3837056-3838075 (Clockwise)
Preceding gene: 119899779
Following gene: 119899786
Centisome position: 87.68
GC content: 69.8
Gene sequence:
>1020_bases ATGCCGCATCAGATTTCGCTCCAGCCCGGTGGCCAGACCTTTACCGCCGGAGAAGACCAGACCGTGCTCGAAGCCGCGCT CGCCGCCGGCCTGTTGCTGCCCTACGGCTGCCGCGATGGCGCCTGTGGCGCCTGCAAGGGCAAGGTGGTGAGCGGCGAGG TGCGCCTGGGCAGCCACTCGCCCGGCGCGCTGAGCGCCGCCGATGCCGCCGCCGGACTCACGCTGTTCTGCCGCGCCCAC GCCTGCAGCGACCTGGTGCTGGAGGCGCGCAACGTCAGCCGCGCCGGTGACATCCCGGTCAAGAAGCTGCCGGCGCGGGT GCAGAAGCTGGAACTCGCCGCGCCCGACGTGATGGTGATCGAACTCAAGCTGCCGGCGAGCGAACCCTTCCAGTTCCGCG CCGGCCAGTACATCGACATCCTGCTGGCGGACGGCCAGCGCCGCAGCTTCTCGATCGCCAACGCGCCCGAGGGCGCGGAC CACGTCGAACTGCATGTGCGCCGCATCGACGGCGGACGCTTCACCGGCCAGGTGTTCGAAACCATGAAGGTGCGCGACAT CCTGCGCTTCGAAGGCCCGCTCGGCACCTTCTGGCTGCGCGAGGACGACGCCCGTCCGATCGTCATGGTCGGCGGCGGCA CCGGCTTCGCCCCGTTGAAGGGCATCATCGAGCACTGCATTGCAGCCGGCATCCAGCGCCCGATCACGCTCTACTGGGGC GCGCGCAACCGGGCCGGCCTCTACATGGACGAACTCGCGCGCGGCTGGACACAGCAGCTGCCGGGCTTCCGCTATATTCC GGTGCTGTCCGAGGCCACCGCGGAAGACGCGTGGAGCGGTCGCAGTGGTCTCGTCCACGCCGCGGTGCTCGAAGACTTTG CCGACCTCTCCGGCCATGCGGTGTACGCTTGCGGCGCGCCGGCCATGATCGAGGCCGCGCGCACCAGCTTCACTGCCGAG CGCGACCTGGCGGGCGAGCACTTCTTCGCCGACGCGTTCACCTTCGCCACTCCGACCTGA
Upstream 100 bases:
>100_bases ACACCCGCATGCGGCGCGCCAGCCACGGAATCGCGCGGCGGGCGACGTCGCCGCTGCCGACAACAAGTATTCTTTTCATT ACTGCATTATCTCACGCACC
Downstream 100 bases:
>100_bases ACAAGAAAACGAGCCACGCATGAGCCAGACCGCCCTCCTCACCCGCGAACCGGTCGTCAACAAGAGCCGGGCCATCACGG CCAACCGCATCGTGGCCCAC
Product: CDP-6-deoxy-delta-3,4-glucoseen reductase
Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: CDP-6-deoxy-delta-3,4-glucoseen reductase; E3 [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MPHQISLQPGGQTFTAGEDQTVLEAALAAGLLLPYGCRDGACGACKGKVVSGEVRLGSHSPGALSAADAAAGLTLFCRAH ACSDLVLEARNVSRAGDIPVKKLPARVQKLELAAPDVMVIELKLPASEPFQFRAGQYIDILLADGQRRSFSIANAPEGAD HVELHVRRIDGGRFTGQVFETMKVRDILRFEGPLGTFWLREDDARPIVMVGGGTGFAPLKGIIEHCIAAGIQRPITLYWG ARNRAGLYMDELARGWTQQLPGFRYIPVLSEATAEDAWSGRSGLVHAAVLEDFADLSGHAVYACGAPAMIEAARTSFTAE RDLAGEHFFADAFTFATPT
Sequences:
>Translated_339_residues MPHQISLQPGGQTFTAGEDQTVLEAALAAGLLLPYGCRDGACGACKGKVVSGEVRLGSHSPGALSAADAAAGLTLFCRAH ACSDLVLEARNVSRAGDIPVKKLPARVQKLELAAPDVMVIELKLPASEPFQFRAGQYIDILLADGQRRSFSIANAPEGAD HVELHVRRIDGGRFTGQVFETMKVRDILRFEGPLGTFWLREDDARPIVMVGGGTGFAPLKGIIEHCIAAGIQRPITLYWG ARNRAGLYMDELARGWTQQLPGFRYIPVLSEATAEDAWSGRSGLVHAAVLEDFADLSGHAVYACGAPAMIEAARTSFTAE RDLAGEHFFADAFTFATPT >Mature_338_residues PHQISLQPGGQTFTAGEDQTVLEAALAAGLLLPYGCRDGACGACKGKVVSGEVRLGSHSPGALSAADAAAGLTLFCRAHA CSDLVLEARNVSRAGDIPVKKLPARVQKLELAAPDVMVIELKLPASEPFQFRAGQYIDILLADGQRRSFSIANAPEGADH VELHVRRIDGGRFTGQVFETMKVRDILRFEGPLGTFWLREDDARPIVMVGGGTGFAPLKGIIEHCIAAGIQRPITLYWGA RNRAGLYMDELARGWTQQLPGFRYIPVLSEATAEDAWSGRSGLVHAAVLEDFADLSGHAVYACGAPAMIEAARTSFTAER DLAGEHFFADAFTFATPT
Specific function: Participates in the conversion of CDP-6-deoxy-D-glycero- L-threo-4-hexulose to 3,6-dideoxy-D-glycero-D-glycero-4-hexulose together with CDP-6-deoxy-D-glycero-L-threo-4-hexulose-3-dehydrase (E1) in two consecutive steps. The detailed mechanism of E3 is not
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=217, Percent_Identity=32.258064516129, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.5.1.29 [C]
Molecular weight: Translated: 36218; Mature: 36086
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHQISLQPGGQTFTAGEDQTVLEAALAAGLLLPYGCRDGACGACKGKVVSGEVRLGSHS CCCEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEEECCCC PGALSAADAAAGLTLFCRAHACSDLVLEARNVSRAGDIPVKKLPARVQKLELAAPDVMVI CCCCCHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE ELKLPASEPFQFRAGQYIDILLADGQRRSFSIANAPEGADHVELHVRRIDGGRFTGQVFE EEECCCCCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEECCCEEHHHHHH TMKVRDILRFEGPLGTFWLREDDARPIVMVGGGTGFAPLKGIIEHCIAAGIQRPITLYWG HHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC ARNRAGLYMDELARGWTQQLPGFRYIPVLSEATAEDAWSGRSGLVHAAVLEDFADLSGHA CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCE VYACGAPAMIEAARTSFTAERDLAGEHFFADAFTFATPT EEECCCCHHHHHHHHHCCHHHCCCCCEEECCEEEECCCC >Mature Secondary Structure PHQISLQPGGQTFTAGEDQTVLEAALAAGLLLPYGCRDGACGACKGKVVSGEVRLGSHS CCEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEEECCCC PGALSAADAAAGLTLFCRAHACSDLVLEARNVSRAGDIPVKKLPARVQKLELAAPDVMVI CCCCCHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE ELKLPASEPFQFRAGQYIDILLADGQRRSFSIANAPEGADHVELHVRRIDGGRFTGQVFE EEECCCCCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEECCCEEHHHHHH TMKVRDILRFEGPLGTFWLREDDARPIVMVGGGTGFAPLKGIIEHCIAAGIQRPITLYWG HHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC ARNRAGLYMDELARGWTQQLPGFRYIPVLSEATAEDAWSGRSGLVHAAVLEDFADLSGHA CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCE VYACGAPAMIEAARTSFTAERDLAGEHFFADAFTFATPT EEECCCCHHHHHHHHHCCHHHCCCCCEEECCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD(P)H2; FMN [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]
Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10931327; 11586360; 12142430 [H]