| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867229
Identifier: 119867229
GI number: 119867229
Start: 1262743
End: 1263033
Strand: Reverse
Name: 119867229
Synonym: Mkms_1179
Alternate gene names: NA
Gene position: 1263033-1262743 (Counterclockwise)
Preceding gene: 119867233
Following gene: 119867227
Centisome position: 22.01
GC content: 64.95
Gene sequence:
>291_bases ATGCCTCAGCCGCAGCAGCTGCCCGGACCCAACGCCGACATCTGGGATTGGCAGATGCATGGACTTTGCCGGGGTGTCGA TTCTTCGATGTTTTTCCACCCCGATGGCGAGCGTGGCCGGGCCCGCGCCCAGCGGGAAATGCGGGCCAAGGAAATGTGCC GGCGCTGCCCCGTGATCGCCCAATGCCGTTCACATGCGCTCGCAGTCGGCGAGCCATACGGAATCTGGGGTGGGCTGAGC GAATCCGAGCGCGAGATGTTGCTCAAGCGCGGTATTCGCCGGACCGCCTGA
Upstream 100 bases:
>100_bases TTGTGTGCACGAGTGGTCATCGGCGACAAGTGCTCGGATCTGTTCCACGACGCACGCTCTATTTCGTTCCCGAAATGGGT GTTTAGAGAGGGGTTTTCCC
Downstream 100 bases:
>100_bases CCGAGCCGTTCAGCGAACGAGAACGCCCCATCTCAGCAAACGCCGGGATGGGGCGTCTCCGTTCTCGGACGACGGATTCC ACAGCCGCCTAGCGCGCCGC
Product: transcription factor WhiB
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; WhiB-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator; Whib-Like Transcriptional Regulator; WhiB Family Transcriptional Factor; Whib Family Transcriptional Regulator; Transcriptional Regulator WhiB; Transcriptional Regulator WhiD; WhiB Protein; WhiB Transcriptional Regulator
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPQPQQLPGPNADIWDWQMHGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRRCPVIAQCRSHALAVGEPYGIWGGLS ESEREMLLKRGIRRTA
Sequences:
>Translated_96_residues MPQPQQLPGPNADIWDWQMHGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRRCPVIAQCRSHALAVGEPYGIWGGLS ESEREMLLKRGIRRTA >Mature_95_residues PQPQQLPGPNADIWDWQMHGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRRCPVIAQCRSHALAVGEPYGIWGGLSE SEREMLLKRGIRRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10964; Mature: 10833
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPQQLPGPNADIWDWQMHGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRRCPVIA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHH QCRSHALAVGEPYGIWGGLSESEREMLLKRGIRRTA HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PQPQQLPGPNADIWDWQMHGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRRCPVIA CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHH QCRSHALAVGEPYGIWGGLSESEREMLLKRGIRRTA HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA