Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is fic [H]
Identifier: 119855146
GI number: 119855146
Start: 270036
End: 270713
Strand: Direct
Name: fic [H]
Synonym: Mkms_5760
Alternate gene names: 119855146
Gene position: 270036-270713 (Clockwise)
Preceding gene: 119855145
Following gene: 119855147
Centisome position: 89.39
GC content: 60.91
Gene sequence:
>678_bases GTGAGCGCGTCCGGCGCCGGTACAACGTCGGGTAACACGCCGCCGCATCCTTGGGAATCTGGAGATTTCGACCAGAGATG GCGGGGGTATTTCATCCCCGGTACCGAGGTCCTGCAAAACCGCGTCGGTGCCGCGACGACAGAGGCACTGCGAGACGCGG AGAACGATCTCGTCGAGTCGCGGATTATCGAGCTGCGTGAGTCCGCCATCCTTCTGGGTGATCGCGGCTACGATTTAGCA TTCCTGCAAGCGATTCATCGTCAGCTCTTTCAAGACGTCTATGACTGGGCTGGCGATGTGCGCACTGTAGGCCTCGAGAA GGGGCAAGAGTCCTTCTGTCCGCCCGGCAACATCGCTCAGGCAATGGATCACGTCGCCAGTGAGATTTCCGAGCATGAAC GGCTCCTAACGGTGGCCGCAGACGCCTTGCCGCGAACCGTTGCCTACCTCTACGACTACGTGAACATCGCCCATCCCTTC AGAGAGGGCAACGGTCGCGCCACCCGCGAGTTTTTCGACCTCTTACTGTCCGAACGCGGCGTGGGCCTCGATTGGCAGCA AACCGACTCGGCCGAACTGCACGCCGCCTGCCACGCGGCCCGTGCTAATTCCGACCTTCGCGGGTTAATCCAGATGTTCG ACGGAATCCTAGACGACGAGCCCGCGTACGACTTCTGA
Upstream 100 bases:
>100_bases ATCCGTCGCAGCAGTGAACTAGAGGGTGCGAGCAGTACTGCTGCCACCCGCGCCGATCAACTCGCCTATGCACGCGGCAC GATCACCGCCACGGAGCTGG
Downstream 100 bases:
>100_bases GGGCAGACTCGGCAGTCTGCCGCCAGCAAATGCGGTCGTGTCAGGGTGGGCGCCCTTGGGGAAGGCCGCGGCTTTTTAGC CAACCGAACTCGCGCCCTCC
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Cell filamentation protein fic [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSASGAGTTSGNTPPHPWESGDFDQRWRGYFIPGTEVLQNRVGAATTEALRDAENDLVESRIIELRESAILLGDRGYDLA FLQAIHRQLFQDVYDWAGDVRTVGLEKGQESFCPPGNIAQAMDHVASEISEHERLLTVAADALPRTVAYLYDYVNIAHPF REGNGRATREFFDLLLSERGVGLDWQQTDSAELHAACHAARANSDLRGLIQMFDGILDDEPAYDF
Sequences:
>Translated_225_residues MSASGAGTTSGNTPPHPWESGDFDQRWRGYFIPGTEVLQNRVGAATTEALRDAENDLVESRIIELRESAILLGDRGYDLA FLQAIHRQLFQDVYDWAGDVRTVGLEKGQESFCPPGNIAQAMDHVASEISEHERLLTVAADALPRTVAYLYDYVNIAHPF REGNGRATREFFDLLLSERGVGLDWQQTDSAELHAACHAARANSDLRGLIQMFDGILDDEPAYDF >Mature_224_residues SASGAGTTSGNTPPHPWESGDFDQRWRGYFIPGTEVLQNRVGAATTEALRDAENDLVESRIIELRESAILLGDRGYDLAF LQAIHRQLFQDVYDWAGDVRTVGLEKGQESFCPPGNIAQAMDHVASEISEHERLLTVAADALPRTVAYLYDYVNIAHPFR EGNGRATREFFDLLLSERGVGLDWQQTDSAELHAACHAARANSDLRGLIQMFDGILDDEPAYDF
Specific function: Involved in cell filamentation induced by cyclic AMP [H]
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Escherichia coli, GI1789761, Length=190, Percent_Identity=30, Blast_Score=97, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 24972; Mature: 24841
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASGAGTTSGNTPPHPWESGDFDQRWRGYFIPGTEVLQNRVGAATTEALRDAENDLVES CCCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCHHHHHHHHHCHHHHHHHHHHHHHHHHH RIIELRESAILLGDRGYDLAFLQAIHRQLFQDVYDWAGDVRTVGLEKGQESFCPPGNIAQ HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCCCCCCCCHHHH AMDHVASEISEHERLLTVAADALPRTVAYLYDYVNIAHPFREGNGRATREFFDLLLSERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC VGLDWQQTDSAELHAACHAARANSDLRGLIQMFDGILDDEPAYDF CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SASGAGTTSGNTPPHPWESGDFDQRWRGYFIPGTEVLQNRVGAATTEALRDAENDLVES CCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCHHHHHHHHHCHHHHHHHHHHHHHHHHH RIIELRESAILLGDRGYDLAFLQAIHRQLFQDVYDWAGDVRTVGLEKGQESFCPPGNIAQ HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCCCCCCCCHHHH AMDHVASEISEHERLLTVAADALPRTVAYLYDYVNIAHPFREGNGRATREFFDLLLSERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC VGLDWQQTDSAELHAACHAARANSDLRGLIQMFDGILDDEPAYDF CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403545; 11677609 [H]