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The map label for this gene is ccdA [H]

Identifier: 119855070

GI number: 119855070

Start: 192502

End: 193272

Strand: Direct

Name: ccdA [H]

Synonym: Mkms_5681

Alternate gene names: 119855070

Gene position: 192502-193272 (Clockwise)

Preceding gene: 119855064

Following gene: 119855071

Centisome position: 63.72

GC content: 65.76

Gene sequence:

>771_bases
GTGGATGGTGTCACCGCTATCGCTACGTCTGGTCACGTGCTCCTCGCGGTGTTCGTGTCGGCGTTGGCTGGGTTGGTGTC
GTTCGCATCGCCCTGCGTGGTACCTCTCGTACCCGGGTATCTGTCCTACCTTGCAGCGGTGGTCGGCGTGGATGACCAGG
CGCGTGCCCAGCCGCTGGGCAGGGCACGTCTGCGGTTGGCAGGGGCCGCAGGGTTGTTCGTTGCCGGGTTCACGGCGGTG
TTCCTCATGGGAACCGTCGCGATTCTGGGTCTGACGACGACGCTTATCACCAATGGGGTGTTATTGCAGCGCATCGGCGG
AGTCGTCACGATCGTGATGGGTCTGGTGTTCATGGGTTTCTTCCCCGCGTTGCAACGCGACGCGCGGTTTACGCCCACGT
CGTTGTCCACGCTGTGGGGTGCGCCGCTACTTGGGGCGGTGTTCGGGCTGGGCTGGACCCCGTGTTTGGGCCCGACGCTG
ACGGGTGTGATCGCTGTGGCATCTGCCAGCGAGGGGCCCAACGTCGTGCGCGGCATCGTGCTCGTCGTCGCCTACTGTGT
GGGTCTGGGCGCTCCGTTCGTGCTGTTCGCGCTGGCATCCGGCCGGGCGATGCGGGCACTGGGCTGGCTGCGCCGAAACA
CCCGGCGAATTCAGGTCTTCGGCGGCGTGCTCCTCGTCGCGGTCGGCATCGCCCTGCTGACCGGGCTGTGGAACGAGGTG
GTGTCGTGGGTGCGCGATGCGTTCGTCACCAACACCACACTTCCGATATGA

Upstream 100 bases:

>100_bases
CATAGTAGATGATGTGGCGTCGGGTGCGGCAGCATGGGTGCGGACCTGCGTGGTAGATGAGTAGGTTCGGACACGGTGGA
TGCGGAGGGTGTCGGACGTC

Downstream 100 bases:

>100_bases
CGCAGTCGCGTTCGAGCGCACCGCGCCGTCGCTCTCCCCGGGGATCCATGTGCTGATCGTGAACCGCCGGAGCCGTGACG
GTGAAAACATCGCGGGATCG

Product: cytochrome c biogenesis protein, transmembrane region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDGVTAIATSGHVLLAVFVSALAGLVSFASPCVVPLVPGYLSYLAAVVGVDDQARAQPLGRARLRLAGAAGLFVAGFTAV
FLMGTVAILGLTTTLITNGVLLQRIGGVVTIVMGLVFMGFFPALQRDARFTPTSLSTLWGAPLLGAVFGLGWTPCLGPTL
TGVIAVASASEGPNVVRGIVLVVAYCVGLGAPFVLFALASGRAMRALGWLRRNTRRIQVFGGVLLVAVGIALLTGLWNEV
VSWVRDAFVTNTTLPI

Sequences:

>Translated_256_residues
MDGVTAIATSGHVLLAVFVSALAGLVSFASPCVVPLVPGYLSYLAAVVGVDDQARAQPLGRARLRLAGAAGLFVAGFTAV
FLMGTVAILGLTTTLITNGVLLQRIGGVVTIVMGLVFMGFFPALQRDARFTPTSLSTLWGAPLLGAVFGLGWTPCLGPTL
TGVIAVASASEGPNVVRGIVLVVAYCVGLGAPFVLFALASGRAMRALGWLRRNTRRIQVFGGVLLVAVGIALLTGLWNEV
VSWVRDAFVTNTTLPI
>Mature_256_residues
MDGVTAIATSGHVLLAVFVSALAGLVSFASPCVVPLVPGYLSYLAAVVGVDDQARAQPLGRARLRLAGAAGLFVAGFTAV
FLMGTVAILGLTTTLITNGVLLQRIGGVVTIVMGLVFMGFFPALQRDARFTPTSLSTLWGAPLLGAVFGLGWTPCLGPTL
TGVIAVASASEGPNVVRGIVLVVAYCVGLGAPFVLFALASGRAMRALGWLRRNTRRIQVFGGVLLVAVGIALLTGLWNEV
VSWVRDAFVTNTTLPI

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 26406; Mature: 26406

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVTAIATSGHVLLAVFVSALAGLVSFASPCVVPLVPGYLSYLAAVVGVDDQARAQPLG
CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHH
RARLRLAGAAGLFVAGFTAVFLMGTVAILGLTTTLITNGVLLQRIGGVVTIVMGLVFMGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPALQRDARFTPTSLSTLWGAPLLGAVFGLGWTPCLGPTLTGVIAVASASEGPNVVRGIV
HHHHHCCCCCCCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LVVAYCVGLGAPFVLFALASGRAMRALGWLRRNTRRIQVFGGVLLVAVGIALLTGLWNEV
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSWVRDAFVTNTTLPI
HHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]