Click here to switch to the map view.

The map label for this gene is ccsA [H]

Identifier: 119855061

GI number: 119855061

Start: 180865

End: 181845

Strand: Direct

Name: ccsA [H]

Synonym: Mkms_5672

Alternate gene names: 119855061

Gene position: 180865-181845 (Clockwise)

Preceding gene: 119855060

Following gene: 119855062

Centisome position: 59.87

GC content: 62.79

Gene sequence:

>981_bases
GTGAACGTCGTTGGCACAAGGGAGTCTCTGGCGCTCTATTCGGACTGGGCCTACGCATCAGCGGTGGGTGTGCTGACGCT
TGCATTGGTGCTTCTTTCGGCGACTTTCGCGATCGGTTGGAGTCGGACACGCGAGACGTCTGCGGCGCGTGTGGGGGTTG
CGCCCGACAGCGCGAGCCCGGGTGTCGTCGCCGTGATGTCACGGCGATCGCGGGCAGAACGTATGGAGCGTGCTGGAATA
GCCGTCGTCTTCGTGGGTGCGGTCTTACTGCTGATGTGCATCGTGCTGCGCGGCCTGGCCACCTCGCGTGCCCCCTGGGG
CAACATGTACGAGTTCATCAACTTGACCTGCTTGTGCGGTCTCGTCGCCGCGGCAGTCGTGTTGCGCCGCCCGCAGTTTC
GCGCGCTGTGGGTGTTCGTCCTGATCCCTGTGCTGATTCTGCTCGCGGTGTCGGGCAAGTGGCTGTATGCCGACGCCGCG
CCCGTGATGCCTGCGTTGCAGTCGTATTGGTTGCCTATTCATGTGTCGGTGGTGAGCCTCGGCTCCGGTGTGTTCCTCGT
CGCCGGAGTGGCGAGCATTCTGTTCCTGGTCAAGACGTCGATCCATGGTGAGCAGCGGGCCGACGGGAGGAACGGGTACG
TCGCGGGCATCATGTCCAGGTTGCCCGATGCGCAGGTTCTGGACAGAATCGCCTACCGCACCACGATCTTTGCGTTCCCG
ACCTTCGGATTCGGCGTCATCTTCGGCGCGATCTGGGCTGAGGAAACGTGGGGACGCTTTTGGGGTTGGGACCCCAAGGA
GACGGTGTCGTTCATCGCGTGGGTTGCCTACGCGGCCTACTTGCATGCCCGGTCCACTGCGGGGTGGCGTGACAGGAAGG
CTGCATGGATCAACGTGGCCGGCTTCGTGGCGATGGTCTTCAACCTATTTTTCATCAATCTGGTGATTGCTGGGTTGCAC
TCCTACGCCGGGGTGGGCTGA

Upstream 100 bases:

>100_bases
GACGATCGCAGGGAGGCGAGGCGAGCGGAGGCAGACGAGCGAGGTTATGGTCTGGCTACGCTACGCCGATAGTCCTCAAT
GGCAGCGTGAGAACTCAGAC

Downstream 100 bases:

>100_bases
CGTCGAGGCCGAAGCGTGCGCACGTACCCGACGTACCAGTTTCGTCTCGCTACGTCATGACCGCGGCTGAACTCAAGACT
CCCGCGGTGTCGTCTCGACG

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNVVGTRESLALYSDWAYASAVGVLTLALVLLSATFAIGWSRTRETSAARVGVAPDSASPGVVAVMSRRSRAERMERAGI
AVVFVGAVLLLMCIVLRGLATSRAPWGNMYEFINLTCLCGLVAAAVVLRRPQFRALWVFVLIPVLILLAVSGKWLYADAA
PVMPALQSYWLPIHVSVVSLGSGVFLVAGVASILFLVKTSIHGEQRADGRNGYVAGIMSRLPDAQVLDRIAYRTTIFAFP
TFGFGVIFGAIWAEETWGRFWGWDPKETVSFIAWVAYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFINLVIAGLH
SYAGVG

Sequences:

>Translated_326_residues
MNVVGTRESLALYSDWAYASAVGVLTLALVLLSATFAIGWSRTRETSAARVGVAPDSASPGVVAVMSRRSRAERMERAGI
AVVFVGAVLLLMCIVLRGLATSRAPWGNMYEFINLTCLCGLVAAAVVLRRPQFRALWVFVLIPVLILLAVSGKWLYADAA
PVMPALQSYWLPIHVSVVSLGSGVFLVAGVASILFLVKTSIHGEQRADGRNGYVAGIMSRLPDAQVLDRIAYRTTIFAFP
TFGFGVIFGAIWAEETWGRFWGWDPKETVSFIAWVAYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFINLVIAGLH
SYAGVG
>Mature_326_residues
MNVVGTRESLALYSDWAYASAVGVLTLALVLLSATFAIGWSRTRETSAARVGVAPDSASPGVVAVMSRRSRAERMERAGI
AVVFVGAVLLLMCIVLRGLATSRAPWGNMYEFINLTCLCGLVAAAVVLRRPQFRALWVFVLIPVLILLAVSGKWLYADAA
PVMPALQSYWLPIHVSVVSLGSGVFLVAGVASILFLVKTSIHGEQRADGRNGYVAGIMSRLPDAQVLDRIAYRTTIFAFP
TFGFGVIFGAIWAEETWGRFWGWDPKETVSFIAWVAYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFINLVIAGLH
SYAGVG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 35385; Mature: 35385

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVGTRESLALYSDWAYASAVGVLTLALVLLSATFAIGWSRTRETSAARVGVAPDSASP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
GVVAVMSRRSRAERMERAGIAVVFVGAVLLLMCIVLRGLATSRAPWGNMYEFINLTCLCG
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LVAAAVVLRRPQFRALWVFVLIPVLILLAVSGKWLYADAAPVMPALQSYWLPIHVSVVSL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCHHHEEEEEHH
GSGVFLVAGVASILFLVKTSIHGEQRADGRNGYVAGIMSRLPDAQVLDRIAYRTTIFAFP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
TFGFGVIFGAIWAEETWGRFWGWDPKETVSFIAWVAYAAYLHARSTAGWRDRKAAWINVA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GFVAMVFNLFFINLVIAGLHSYAGVG
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVVGTRESLALYSDWAYASAVGVLTLALVLLSATFAIGWSRTRETSAARVGVAPDSASP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
GVVAVMSRRSRAERMERAGIAVVFVGAVLLLMCIVLRGLATSRAPWGNMYEFINLTCLCG
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LVAAAVVLRRPQFRALWVFVLIPVLILLAVSGKWLYADAAPVMPALQSYWLPIHVSVVSL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCHHHEEEEEHH
GSGVFLVAGVASILFLVKTSIHGEQRADGRNGYVAGIMSRLPDAQVLDRIAYRTTIFAFP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
TFGFGVIFGAIWAEETWGRFWGWDPKETVSFIAWVAYAAYLHARSTAGWRDRKAAWINVA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GFVAMVFNLFFINLVIAGLHSYAGVG
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]