Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119855054
Identifier: 119855054
GI number: 119855054
Start: 173092
End: 174087
Strand: Direct
Name: 119855054
Synonym: Mkms_5665
Alternate gene names: NA
Gene position: 173092-174087 (Clockwise)
Preceding gene: 119855053
Following gene: 119855059
Centisome position: 57.3
GC content: 65.16
Gene sequence:
>996_bases ATGGTGGGCTGCCCCGTGATCGGTCAGGTGGTGCTCCCCACCTCACCGCCGTCGCTATCGGCGATGCTCGGTTGGTTACC GCCACCGGTTCCGATACTGCCGGTATCGGCAATTGTTTTGGCGGTGTGGTACCTGCTCGCCGTTCGAGTCGTCAGATCCC GTGGCCGCCAGTGGGCGTGGAAACGGACGGCGAGCTTCCTGGCGGGCTGTATCGCCTTGGCGGCGGTGACGGGCCTGGCC ATCGACGGCTACGGCTACGGACTGTTCAGTGCCTTCATGTTCCAGCACCTCACGCTCTCGATTCTTGTTCCGCCGCTGCT GGTGCTGGGTGCGCCCGGCCGGCTGCTACTCAGGTCCACGCCCCATCGTGGACTCGGACGCTACGTCGTGATCTCCGCGC TGGGCGGACTGCGCTGCCGGGCGAGCAGGATCGTGCTGCACCCCGGCTTCACCATTCCGGTGTTCCTGTTGAGCTACTAC GGCCTGTACCTCTCCGACCTGTTCGACGCGGCGGCGGCCAGCGTGGCCGGACACGTCACACTGCAGGTGTTCTTCCTCGC CAGCGGCCTATTGTTCATCCTGCCGATCCTGTCGACCGGTCCCTTGCCGGTCCGGCAGAGCAACCTGGGCCGCTTCTTCG ACATCTTCGTCGAAATGCCGTTGCATGTCTTCATCGGCGTCATCTTGATGATGGCGCCTCGGACGCTCACCGAGACCTTC TCCCAACCTCCGCCTGACTGGAACGTCGACCCCGTCGCCGACCAGGGGGTCGCCGGCGCCTTAGCGTGGTCCTACGGCGA GCCCGTCGCGCTGCTGACTACAGTGATCTTCGCCATCCGGTGGCGCCGTGACGAGGAGTCGGAGTCGAAGAAAAGGGAGG CCGACGTCGAACGCGACGACGCGGAACTGGCTGCCTACAACGCGTTTCTGCGCGGACTGCACCAACAGCGGCGACCACCT ACTGACTTGCCGAGCACCGCCAACGAGCACGACTGA
Upstream 100 bases:
>100_bases ACCGCAACCGGCTCAGGCCCCCCGCGATGAATGGCGACCCCGCCCCGGCTGCACGTCGCCGCGGGGCGCGGCCGACACTC GGGCGCAACGCTGCGACGCG
Downstream 100 bases:
>100_bases CGCCGTGGTGACAACGCGCCAGCCATCATCCCGGCGCCATGACCGAGGTTGTCGCAGCGACACTCGTCAGCGCCGCAGGG TCTCCATGACGGAAATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MVGCPVIGQVVLPTSPPSLSAMLGWLPPPVPILPVSAIVLAVWYLLAVRVVRSRGRQWAWKRTASFLAGCIALAAVTGLA IDGYGYGLFSAFMFQHLTLSILVPPLLVLGAPGRLLLRSTPHRGLGRYVVISALGGLRCRASRIVLHPGFTIPVFLLSYY GLYLSDLFDAAAASVAGHVTLQVFFLASGLLFILPILSTGPLPVRQSNLGRFFDIFVEMPLHVFIGVILMMAPRTLTETF SQPPPDWNVDPVADQGVAGALAWSYGEPVALLTTVIFAIRWRRDEESESKKREADVERDDAELAAYNAFLRGLHQQRRPP TDLPSTANEHD
Sequences:
>Translated_331_residues MVGCPVIGQVVLPTSPPSLSAMLGWLPPPVPILPVSAIVLAVWYLLAVRVVRSRGRQWAWKRTASFLAGCIALAAVTGLA IDGYGYGLFSAFMFQHLTLSILVPPLLVLGAPGRLLLRSTPHRGLGRYVVISALGGLRCRASRIVLHPGFTIPVFLLSYY GLYLSDLFDAAAASVAGHVTLQVFFLASGLLFILPILSTGPLPVRQSNLGRFFDIFVEMPLHVFIGVILMMAPRTLTETF SQPPPDWNVDPVADQGVAGALAWSYGEPVALLTTVIFAIRWRRDEESESKKREADVERDDAELAAYNAFLRGLHQQRRPP TDLPSTANEHD >Mature_331_residues MVGCPVIGQVVLPTSPPSLSAMLGWLPPPVPILPVSAIVLAVWYLLAVRVVRSRGRQWAWKRTASFLAGCIALAAVTGLA IDGYGYGLFSAFMFQHLTLSILVPPLLVLGAPGRLLLRSTPHRGLGRYVVISALGGLRCRASRIVLHPGFTIPVFLLSYY GLYLSDLFDAAAASVAGHVTLQVFFLASGLLFILPILSTGPLPVRQSNLGRFFDIFVEMPLHVFIGVILMMAPRTLTETF SQPPPDWNVDPVADQGVAGALAWSYGEPVALLTTVIFAIRWRRDEESESKKREADVERDDAELAAYNAFLRGLHQQRRPP TDLPSTANEHD
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1998 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 - InterPro: IPR019108 [H]
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 36090; Mature: 36090
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGCPVIGQVVLPTSPPSLSAMLGWLPPPVPILPVSAIVLAVWYLLAVRVVRSRGRQWAW CCCCCCCCEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KRTASFLAGCIALAAVTGLAIDGYGYGLFSAFMFQHLTLSILVPPLLVLGAPGRLLLRST HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC PHRGLGRYVVISALGGLRCRASRIVLHPGFTIPVFLLSYYGLYLSDLFDAAAASVAGHVT CCCCCCHHHHHHHHCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQVFFLASGLLFILPILSTGPLPVRQSNLGRFFDIFVEMPLHVFIGVILMMAPRTLTETF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SQPPPDWNVDPVADQGVAGALAWSYGEPVALLTTVIFAIRWRRDEESESKKREADVERDD CCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH AELAAYNAFLRGLHQQRRPPTDLPSTANEHD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVGCPVIGQVVLPTSPPSLSAMLGWLPPPVPILPVSAIVLAVWYLLAVRVVRSRGRQWAW CCCCCCCCEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KRTASFLAGCIALAAVTGLAIDGYGYGLFSAFMFQHLTLSILVPPLLVLGAPGRLLLRST HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC PHRGLGRYVVISALGGLRCRASRIVLHPGFTIPVFLLSYYGLYLSDLFDAAAASVAGHVT CCCCCCHHHHHHHHCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQVFFLASGLLFILPILSTGPLPVRQSNLGRFFDIFVEMPLHVFIGVILMMAPRTLTETF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SQPPPDWNVDPVADQGVAGALAWSYGEPVALLTTVIFAIRWRRDEESESKKREADVERDD CCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH AELAAYNAFLRGLHQQRRPPTDLPSTANEHD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]