Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is xylX [H]
Identifier: 119855022
GI number: 119855022
Start: 142545
End: 143726
Strand: Direct
Name: xylX [H]
Synonym: Mkms_5630
Alternate gene names: 119855022
Gene position: 142545-143726 (Clockwise)
Preceding gene: 119855021
Following gene: 119855023
Centisome position: 47.19
GC content: 63.62
Gene sequence:
>1182_bases GTGAAGCTTGGACCGACGATGGAGTTCGACCACATACAGCCGGCGATCCGGAAACGGTTCACCTCTGCAGCGGACATCCC CAAGGAGGTGTTCAGCGACCCCGACGTCTACCGGGAAGAGCTCACCCGCATCTTCTATGGCCCCTACTGGCATCCGATCG CGCACCGGGCCGAGCTGGCCGAGCGCAACGCCTTCCGGACGAGATGGCTGGCCGACGTGCCGCTGCTGATGGTGCGGGAC GGCGATGACCGCATCCGCGTGTTCGTCAACTCCTGCGCCCATCGGGGAACGCTACTGGAACAGCGCCGGTGCGGGGTGGC GGAGCGATTCGAGTGTCCGTATCACCGGTGGATCTTCAACAATGACGGCCGTTTCGCCGGCGCGCCCCGCCGCATGCAGT TTCGCCCGGACTTTCGCGAGGAGGACTACGGCCTCCGGGAGCTGCACGTAGTCGAGGCGTGGGGTTTGATCTTCGTCAGC ATGGCTGCGCAGCCGCCGCCGTTCGACGATTATCTCGGCGATAGCGCGGATCCGTTGCGCGACTGCATGGTCGATGACGG GGACTTGACGTTGCTGGGCTACCAGACGGTGGTGTTTCAGAGTAATTGGAAAACCTACATCGACAACGATCCCTATCACG CGCCGCTGCTGCACAGCGCGTTCAAACTGCTCAACTGGCAGGGCGGCAGCGGAAACGTGCTGGTCAGCGAGCCCTATGGG CACATGTCGATTCTGTACGATGCGCAACCCTACGTGGACAACGGTTTCCTGGCTGACCCGAGTGTGGTCACGCGGATGGG GGATGACAGCCGAGCCCGCGTGATTGCGTTACGGCCGGTTACCGGGATCGTGCGTCACGTCGACACGATCAACGTCCGGT ACGCCCGCCCGCTGGGGGTTGATCGTACCGAGGTGCGATACACGTTCTTCGGCCATGCCAGTGACTCCGAGGACTTCGCA CGCCACCGAGTCCGCCAGTCGTCAAACCTGCTGGGGCCGAGCGGCTTCATCAGTATCGAGGACGCCGCCGTCTACAACCG CGTGCAGGCGACCGCGCGTGACGGCGGCTATCAGCGCTTTGTCGCCGGCGTCGGCCGACCATTGTCGGAGTCGTCGCAGA ACGACGAGGTCGCCAATACCGGCTGGTGGGCGCACTACCAGGAGGTGATGGAGTTTTGTTGA
Upstream 100 bases:
>100_bases GGCTTTACGTGTCGGAAGACGAGGGCCACACCTGGAAGTGCCTGGCCGACGGCCTGGGCGCGATCACCCACATCGCGACG CCGAAGAAGGGAACAGCGCA
Downstream 100 bases:
>100_bases CATCGAGCGTCGAAGATCGGCGGGCACGTGCCGCGTACCTGGTGGACGAACTGCTGGGAGCCTACGCCCGCGCAGTCGAC GATCAAGACTTCACCGCGTG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKLGPTMEFDHIQPAIRKRFTSAADIPKEVFSDPDVYREELTRIFYGPYWHPIAHRAELAERNAFRTRWLADVPLLMVRD GDDRIRVFVNSCAHRGTLLEQRRCGVAERFECPYHRWIFNNDGRFAGAPRRMQFRPDFREEDYGLRELHVVEAWGLIFVS MAAQPPPFDDYLGDSADPLRDCMVDDGDLTLLGYQTVVFQSNWKTYIDNDPYHAPLLHSAFKLLNWQGGSGNVLVSEPYG HMSILYDAQPYVDNGFLADPSVVTRMGDDSRARVIALRPVTGIVRHVDTINVRYARPLGVDRTEVRYTFFGHASDSEDFA RHRVRQSSNLLGPSGFISIEDAAVYNRVQATARDGGYQRFVAGVGRPLSESSQNDEVANTGWWAHYQEVMEFC
Sequences:
>Translated_393_residues MKLGPTMEFDHIQPAIRKRFTSAADIPKEVFSDPDVYREELTRIFYGPYWHPIAHRAELAERNAFRTRWLADVPLLMVRD GDDRIRVFVNSCAHRGTLLEQRRCGVAERFECPYHRWIFNNDGRFAGAPRRMQFRPDFREEDYGLRELHVVEAWGLIFVS MAAQPPPFDDYLGDSADPLRDCMVDDGDLTLLGYQTVVFQSNWKTYIDNDPYHAPLLHSAFKLLNWQGGSGNVLVSEPYG HMSILYDAQPYVDNGFLADPSVVTRMGDDSRARVIALRPVTGIVRHVDTINVRYARPLGVDRTEVRYTFFGHASDSEDFA RHRVRQSSNLLGPSGFISIEDAAVYNRVQATARDGGYQRFVAGVGRPLSESSQNDEVANTGWWAHYQEVMEFC >Mature_393_residues MKLGPTMEFDHIQPAIRKRFTSAADIPKEVFSDPDVYREELTRIFYGPYWHPIAHRAELAERNAFRTRWLADVPLLMVRD GDDRIRVFVNSCAHRGTLLEQRRCGVAERFECPYHRWIFNNDGRFAGAPRRMQFRPDFREEDYGLRELHVVEAWGLIFVS MAAQPPPFDDYLGDSADPLRDCMVDDGDLTLLGYQTVVFQSNWKTYIDNDPYHAPLLHSAFKLLNWQGGSGNVLVSEPYG HMSILYDAQPYVDNGFLADPSVVTRMGDDSRARVIALRPVTGIVRHVDTINVRYARPLGVDRTEVRYTFFGHASDSEDFA RHRVRQSSNLLGPSGFISIEDAAVYNRVQATARDGGYQRFVAGVGRPLSESSQNDEVANTGWWAHYQEVMEFC
Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788888, Length=367, Percent_Identity=26.7029972752044, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788103, Length=360, Percent_Identity=25.8333333333333, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017639 - InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR015879 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 44993; Mature: 44993
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGPTMEFDHIQPAIRKRFTSAADIPKEVFSDPDVYREELTRIFYGPYWHPIAHRAELA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ERNAFRTRWLADVPLLMVRDGDDRIRVFVNSCAHRGTLLEQRRCGVAERFECPYHRWIFN HHHHHHHHHHCCCCEEEEECCCCCEEHEEHHHHHCCHHHHHHHCCCHHHCCCCCEEEEEC NDGRFAGAPRRMQFRPDFREEDYGLRELHVVEAWGLIFVSMAAQPPPFDDYLGDSADPLR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHH DCMVDDGDLTLLGYQTVVFQSNWKTYIDNDPYHAPLLHSAFKLLNWQGGSGNVLVSEPYG HHHCCCCCEEEEEEEEEEEECCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCC HMSILYDAQPYVDNGFLADPSVVTRMGDDSRARVIALRPVTGIVRHVDTINVRYARPLGV CEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHEEEEEEECCCCC DRTEVRYTFFGHASDSEDFARHRVRQSSNLLGPSGFISIEDAAVYNRVQATARDGGYQRF CCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCHHHH VAGVGRPLSESSQNDEVANTGWWAHYQEVMEFC HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MKLGPTMEFDHIQPAIRKRFTSAADIPKEVFSDPDVYREELTRIFYGPYWHPIAHRAELA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ERNAFRTRWLADVPLLMVRDGDDRIRVFVNSCAHRGTLLEQRRCGVAERFECPYHRWIFN HHHHHHHHHHCCCCEEEEECCCCCEEHEEHHHHHCCHHHHHHHCCCHHHCCCCCEEEEEC NDGRFAGAPRRMQFRPDFREEDYGLRELHVVEAWGLIFVSMAAQPPPFDDYLGDSADPLR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHH DCMVDDGDLTLLGYQTVVFQSNWKTYIDNDPYHAPLLHSAFKLLNWQGGSGNVLVSEPYG HHHCCCCCEEEEEEEEEEEECCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCC HMSILYDAQPYVDNGFLADPSVVTRMGDDSRARVIALRPVTGIVRHVDTINVRYARPLGV CEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHEEEEEEECCCCC DRTEVRYTFFGHASDSEDFARHRVRQSSNLLGPSGFISIEDAAVYNRVQATARDGGYQRF CCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCHHHH VAGVGRPLSESSQNDEVANTGWWAHYQEVMEFC HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: 2Fe-2S. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; Proton; O2; 3-phenylpropionate [C]
Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1740120; 1938949 [H]