Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119854959
Identifier: 119854959
GI number: 119854959
Start: 73062
End: 74261
Strand: Direct
Name: 119854959
Synonym: Mkms_5565
Alternate gene names: NA
Gene position: 73062-74261 (Clockwise)
Preceding gene: 119854957
Following gene: 119854960
Centisome position: 24.19
GC content: 65.25
Gene sequence:
>1200_bases ATGGCAATCCCCCGCCTCGTCGAGTTGATCGACAGGTATCGGACCGCGCACGGCGTGAGCGAATCCGAAGTGGCCCGCCG GATTGGCATGTCCCGCGAGAACCTGCGCAAGTGGCGGATTAACGGTGTCAGCCGCCTCCCGGACCGCGAGAATTTGGCGG CTGTCGCCCGTGTGATCGGCAAGCCCTATCGCGAGGTCGTTTCTGCGGCCTTGTTCGACACCGGATACCTCACTGACGAC CAGGCGTCCACACCGAGGCCTCACGATGAGGTCCTCCACGACGCGATCAGCGTGCTTACCGAGGCAACCCGGCTGACCAA TCAACCTATGCGGCAAGCGACGTCAGGCCAATGGGAGGTTGATCCCGATCCCCGCGCCGCGCTGCGCATCGACTGGGCCG CCTTCGTAACGCTGGCCCTGGCGGGCACGGCGGCCAACGTTGGGAGCATCGAGGAAGCGCTGGCAGGCCGGCCAGGCTCG TGGGAGGCCGAAATGGTGCGGCGCACATTACAAGCCACGGTCTTTGACGACAAAGACTTACTGCGCCATCGCACCGAGCC GGTCGTGGTCGATCTCTGGGTGGAGAGCATTCTTGCCCAGATCGACGACGGCAGCGACGACGCCTATGCCGACGCACAGC TCGAACTCGACGCCCGCGCCGATGCCATTCCTGAGCCCACCGACCTGCCGCCAGGCCCCTTCTCCCCCAACGACCCCCGC ATCGCAGCCGTGGACTGGGTGAATGTGGACGACAACGGCTACCTGGTCATCACCCACGATGGCTGGGCCGGCGACGCTGA CGACGTGGCCCTGCTGACCGAGCTCTCAGCCGAGGCCGAAGCCTCCCGAAATCCGACCCTCGGCGAGATCGCCTATGAGC AGGCCATGCAGTCGATCGCTGCCCTGGTCGACGCGCTCAATGAGCAGCAGAAACGCGAATACACCGAGTACGCGACCCGG CTCACCGAGGCCATCCACGCGCAACTCGCGGCCCTAGAGCTGACGGTACCGCTGTCGATCACCATCACCCTTGCCCCCGA GACCTGGGCTCACGAGGACTTCGACAAGCACGCACCGTCGACGTACTCAAGCAGCGCCATCGAGGGCGCCATCGAAAGCG CCGTCATGGAAACCCCCACCCCTGCAGCCCTCCCCGGCAGTCCCCTCGAACGGCTCGAAGCAAGTCGAAAAGGTCAGTAG
Upstream 100 bases:
>100_bases CAACACATTTCGCCGATAATAGCGATTATGTCAACTCACAGTTGGCACATATGCACACTCACACTTGACGTAGGTGGATT GTCGCAGAATACTTGGCGGT
Downstream 100 bases:
>100_bases CAACAATGAGCGAGGTACTTCTTCACCACGTCGAGTGCGGCCCCGTGCAACTGCTCAACAGCGCGCCGACACCGGCCACA GTGCTGGCCAGCCTGCCCGG
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MAIPRLVELIDRYRTAHGVSESEVARRIGMSRENLRKWRINGVSRLPDRENLAAVARVIGKPYREVVSAALFDTGYLTDD QASTPRPHDEVLHDAISVLTEATRLTNQPMRQATSGQWEVDPDPRAALRIDWAAFVTLALAGTAANVGSIEEALAGRPGS WEAEMVRRTLQATVFDDKDLLRHRTEPVVVDLWVESILAQIDDGSDDAYADAQLELDARADAIPEPTDLPPGPFSPNDPR IAAVDWVNVDDNGYLVITHDGWAGDADDVALLTELSAEAEASRNPTLGEIAYEQAMQSIAALVDALNEQQKREYTEYATR LTEAIHAQLAALELTVPLSITITLAPETWAHEDFDKHAPSTYSSSAIEGAIESAVMETPTPAALPGSPLERLEASRKGQ
Sequences:
>Translated_399_residues MAIPRLVELIDRYRTAHGVSESEVARRIGMSRENLRKWRINGVSRLPDRENLAAVARVIGKPYREVVSAALFDTGYLTDD QASTPRPHDEVLHDAISVLTEATRLTNQPMRQATSGQWEVDPDPRAALRIDWAAFVTLALAGTAANVGSIEEALAGRPGS WEAEMVRRTLQATVFDDKDLLRHRTEPVVVDLWVESILAQIDDGSDDAYADAQLELDARADAIPEPTDLPPGPFSPNDPR IAAVDWVNVDDNGYLVITHDGWAGDADDVALLTELSAEAEASRNPTLGEIAYEQAMQSIAALVDALNEQQKREYTEYATR LTEAIHAQLAALELTVPLSITITLAPETWAHEDFDKHAPSTYSSSAIEGAIESAVMETPTPAALPGSPLERLEASRKGQ >Mature_398_residues AIPRLVELIDRYRTAHGVSESEVARRIGMSRENLRKWRINGVSRLPDRENLAAVARVIGKPYREVVSAALFDTGYLTDDQ ASTPRPHDEVLHDAISVLTEATRLTNQPMRQATSGQWEVDPDPRAALRIDWAAFVTLALAGTAANVGSIEEALAGRPGSW EAEMVRRTLQATVFDDKDLLRHRTEPVVVDLWVESILAQIDDGSDDAYADAQLELDARADAIPEPTDLPPGPFSPNDPRI AAVDWVNVDDNGYLVITHDGWAGDADDVALLTELSAEAEASRNPTLGEIAYEQAMQSIAALVDALNEQQKREYTEYATRL TEAIHAQLAALELTVPLSITITLAPETWAHEDFDKHAPSTYSSSAIEGAIESAVMETPTPAALPGSPLERLEASRKGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43584; Mature: 43453
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPRLVELIDRYRTAHGVSESEVARRIGMSRENLRKWRINGVSRLPDRENLAAVARVIG CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCHHCCCCHHHHHHHHHHHC KPYREVVSAALFDTGYLTDDQASTPRPHDEVLHDAISVLTEATRLTNQPMRQATSGQWEV CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC DPDPRAALRIDWAAFVTLALAGTAANVGSIEEALAGRPGSWEAEMVRRTLQATVFDDKDL CCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH LRHRTEPVVVDLWVESILAQIDDGSDDAYADAQLELDARADAIPEPTDLPPGPFSPNDPR HHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC IAAVDWVNVDDNGYLVITHDGWAGDADDVALLTELSAEAEASRNPTLGEIAYEQAMQSIA EEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALVDALNEQQKREYTEYATRLTEAIHAQLAALELTVPLSITITLAPETWAHEDFDKHAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCHHHCCCC TYSSSAIEGAIESAVMETPTPAALPGSPLERLEASRKGQ CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure AIPRLVELIDRYRTAHGVSESEVARRIGMSRENLRKWRINGVSRLPDRENLAAVARVIG CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCHHCCCCHHHHHHHHHHHC KPYREVVSAALFDTGYLTDDQASTPRPHDEVLHDAISVLTEATRLTNQPMRQATSGQWEV CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC DPDPRAALRIDWAAFVTLALAGTAANVGSIEEALAGRPGSWEAEMVRRTLQATVFDDKDL CCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH LRHRTEPVVVDLWVESILAQIDDGSDDAYADAQLELDARADAIPEPTDLPPGPFSPNDPR HHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC IAAVDWVNVDDNGYLVITHDGWAGDADDVALLTELSAEAEASRNPTLGEIAYEQAMQSIA EEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALVDALNEQQKREYTEYATRLTEAIHAQLAALELTVPLSITITLAPETWAHEDFDKHAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCHHHCCCC TYSSSAIEGAIESAVMETPTPAALPGSPLERLEASRKGQ CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA