Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119854958
Identifier: 119854958
GI number: 119854958
Start: 71903
End: 72607
Strand: Reverse
Name: 119854958
Synonym: Mkms_5564
Alternate gene names: NA
Gene position: 72607-71903 (Counterclockwise)
Preceding gene: 119854962
Following gene: 119854956
Centisome position: 24.03
GC content: 66.67
Gene sequence:
>705_bases ATGAGCGCACCAGCTGCTGTTGACCTCGCCGAGTACTTACGCGGGCCGCACGTGGCGCGCCGAGGTGCCGCGGAGCTGGG CCTGCCGGTGCTGCACTTCGAAAGCCTCGACGCCGCCACGGTCAGTTGGTGTCGCGATTGGCGCGCAGAGATACGAATGA CCGATCTGGCAGCCGAGGTGGCCGCCTCCCCCGCGGTGACGGTTGGAGCGGTGGACTTCGTGCTGGTGCACCTCGGACAG AGCCGCCAGCCTGTCGCTGACCGTCTCGCCCAGTTGGGCACTCGGGAGGCCCGTTTCGGAGAGCTGTTCAACGGCGGAGA ACTTGAGGCGGCGCTCGACGAACACATCGAATTCTTCGACGGCATGCCAATATTCACCGTTCTGCCGGTGGTGGCCGCAA TCGTCGACGACCTCATGCCAGTCTCCCGGCTACGCGCCTGGTCGGTGGCCGAGGTCATCCATACAATGCTGCCGACCAAT TCAGGCATGGCGGTCGCTTCTGCCCTCGACGGCGCTGGCCGGCCTGGTCGTCAGTTGGTGTCGGCCGACCGGCTCGACCG CGACTGGCTCGATGTCGGCCTCACGGGAATCCCCGGTCATCCGGCCCTGGTCGGCCGGGCGACGATGTTCACCTACCTCG ACGATGCGCGCGCCGCCCTAGCAGGCGTCGCCGACGAGGTGTTCACTGTTCGAGCTGGCGGTTAA
Upstream 100 bases:
>100_bases TCCCCCGTCGACCGCACTACGTATGCTGCGGGTCGGCCGCGTTATTTCGTCACTGTGACGAATTGAGGATGCCGACCGCT GCCACGGAGTGTGCAACCTG
Downstream 100 bases:
>100_bases CCCGGGTCTCAGTTCTGCTGTGCTGCTGGACATTTGAGTCTTCCGGCCAGCACGCTAACTAGAAGTGCGGTGTCATCTTC ACTCACGCTGCGCGACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSAPAAVDLAEYLRGPHVARRGAAELGLPVLHFESLDAATVSWCRDWRAEIRMTDLAAEVAASPAVTVGAVDFVLVHLGQ SRQPVADRLAQLGTREARFGELFNGGELEAALDEHIEFFDGMPIFTVLPVVAAIVDDLMPVSRLRAWSVAEVIHTMLPTN SGMAVASALDGAGRPGRQLVSADRLDRDWLDVGLTGIPGHPALVGRATMFTYLDDARAALAGVADEVFTVRAGG
Sequences:
>Translated_234_residues MSAPAAVDLAEYLRGPHVARRGAAELGLPVLHFESLDAATVSWCRDWRAEIRMTDLAAEVAASPAVTVGAVDFVLVHLGQ SRQPVADRLAQLGTREARFGELFNGGELEAALDEHIEFFDGMPIFTVLPVVAAIVDDLMPVSRLRAWSVAEVIHTMLPTN SGMAVASALDGAGRPGRQLVSADRLDRDWLDVGLTGIPGHPALVGRATMFTYLDDARAALAGVADEVFTVRAGG >Mature_233_residues SAPAAVDLAEYLRGPHVARRGAAELGLPVLHFESLDAATVSWCRDWRAEIRMTDLAAEVAASPAVTVGAVDFVLVHLGQS RQPVADRLAQLGTREARFGELFNGGELEAALDEHIEFFDGMPIFTVLPVVAAIVDDLMPVSRLRAWSVAEVIHTMLPTNS GMAVASALDGAGRPGRQLVSADRLDRDWLDVGLTGIPGHPALVGRATMFTYLDDARAALAGVADEVFTVRAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24864; Mature: 24732
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPAAVDLAEYLRGPHVARRGAAELGLPVLHFESLDAATVSWCRDWRAEIRMTDLAAEV CCCCHHHHHHHHHCCCHHHHCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AASPAVTVGAVDFVLVHLGQSRQPVADRLAQLGTREARFGELFNGGELEAALDEHIEFFD HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHC GMPIFTVLPVVAAIVDDLMPVSRLRAWSVAEVIHTMLPTNSGMAVASALDGAGRPGRQLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH SADRLDRDWLDVGLTGIPGHPALVGRATMFTYLDDARAALAGVADEVFTVRAGG HHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC >Mature Secondary Structure SAPAAVDLAEYLRGPHVARRGAAELGLPVLHFESLDAATVSWCRDWRAEIRMTDLAAEV CCCHHHHHHHHHCCCHHHHCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AASPAVTVGAVDFVLVHLGQSRQPVADRLAQLGTREARFGELFNGGELEAALDEHIEFFD HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHC GMPIFTVLPVVAAIVDDLMPVSRLRAWSVAEVIHTMLPTNSGMAVASALDGAGRPGRQLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH SADRLDRDWLDVGLTGIPGHPALVGRATMFTYLDDARAALAGVADEVFTVRAGG HHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA