Definition Mycobacterium sp. KMS plasmid pMKMS01, complete sequence.
Accession NC_008703
Length 302,089

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The map label for this gene is 119854943

Identifier: 119854943

GI number: 119854943

Start: 57907

End: 58737

Strand: Reverse

Name: 119854943

Synonym: Mkms_5548

Alternate gene names: NA

Gene position: 58737-57907 (Counterclockwise)

Preceding gene: 119854944

Following gene: 119854940

Centisome position: 19.44

GC content: 63.3

Gene sequence:

>831_bases
GTGCTCGACTGGCTGCGACACCTGCGACATGGTTCCCGCCGTTCGAAACCACGCCAGCCGGTAACCGCCAACGAGTACTG
CCGGGTAGCCGCCCCTATCCTGCGCGACTGGTCAAAGTCCTACGGCAACCTACGGGAAGTCACCAGCGACGACATCTGCG
TAGTCATCGACGGTCTTCCCGCGCACCGCCGCAGCCATACCTTGGTGGTCTTGCGCTCGCTGTTTCGATACCTCAAGCGT
GAGAAACGGATCTTCGCCAATCCGACCATCCGCTTACGCCCTGGCCGCGTGGCCCCGGCCGCGCTGGTGCCGGTTGACGC
TGACGATTACCAAGAAGCCGTCGTGGCCGCCACCACACCCCAGCATCGCGTCGCGCTGGCCCTCGCTGCCGTCCACGCAG
CCCGGCCGGCAGACATCCGGAACCTGCGACTTGACGACATCGACTTGGGCGCACGTCGACTGACGATCAGAGGACACACC
CGCCGCGTTGATGAACTGACGCACCGAATACTCACTCAATACCTCGACTATCGAAGAAAAACCTGGCCCTACACCGCAAA
CCGCCACCTACTGGTGACCTCCATAACAGCCAACGACACCCGGCCGGTCAGCGACTACACGGTCACTCAACTCTTCGGTG
GGCTGAAGGCGACGCTCGGAAAACTCAGCGTCGATCGCCAACTCGAAGAGGCCATCACGCACGGACCAGATCCACTCCAC
CTTGCCGCCGTCTTCGGACTATCCCACGGCACAGCCGTCCGGTACTCAGAGGCCGCCCGGGTCGTGCTGAACGACGACCG
GGCCTCAACCGCAGGATGTGGCCCCAACTGA

Upstream 100 bases:

>100_bases
CCTCGATGATGCCGGTCTGCTCCTCGATGACCGACCCGACGTCGCAGAACTGAACTGGCATCGCCGACTCACCGACATCT
CGGATGGAATCAAAGACGAC

Downstream 100 bases:

>100_bases
AGGACGGTTCCTTCGACTTCTTGCACGTGTTGCAATCGGATGTGCCCGATCCCGCGGTATGAGCCGGTGTGAGCAAACTC
CCGTCGCACGCGCCGCAGTC

Product: phage integrase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MLDWLRHLRHGSRRSKPRQPVTANEYCRVAAPILRDWSKSYGNLREVTSDDICVVIDGLPAHRRSHTLVVLRSLFRYLKR
EKRIFANPTIRLRPGRVAPAALVPVDADDYQEAVVAATTPQHRVALALAAVHAARPADIRNLRLDDIDLGARRLTIRGHT
RRVDELTHRILTQYLDYRRKTWPYTANRHLLVTSITANDTRPVSDYTVTQLFGGLKATLGKLSVDRQLEEAITHGPDPLH
LAAVFGLSHGTAVRYSEAARVVLNDDRASTAGCGPN

Sequences:

>Translated_276_residues
MLDWLRHLRHGSRRSKPRQPVTANEYCRVAAPILRDWSKSYGNLREVTSDDICVVIDGLPAHRRSHTLVVLRSLFRYLKR
EKRIFANPTIRLRPGRVAPAALVPVDADDYQEAVVAATTPQHRVALALAAVHAARPADIRNLRLDDIDLGARRLTIRGHT
RRVDELTHRILTQYLDYRRKTWPYTANRHLLVTSITANDTRPVSDYTVTQLFGGLKATLGKLSVDRQLEEAITHGPDPLH
LAAVFGLSHGTAVRYSEAARVVLNDDRASTAGCGPN
>Mature_276_residues
MLDWLRHLRHGSRRSKPRQPVTANEYCRVAAPILRDWSKSYGNLREVTSDDICVVIDGLPAHRRSHTLVVLRSLFRYLKR
EKRIFANPTIRLRPGRVAPAALVPVDADDYQEAVVAATTPQHRVALALAAVHAARPADIRNLRLDDIDLGARRLTIRGHT
RRVDELTHRILTQYLDYRRKTWPYTANRHLLVTSITANDTRPVSDYTVTQLFGGLKATLGKLSVDRQLEEAITHGPDPLH
LAAVFGLSHGTAVRYSEAARVVLNDDRASTAGCGPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30961; Mature: 30961

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDWLRHLRHGSRRSKPRQPVTANEYCRVAAPILRDWSKSYGNLREVTSDDICVVIDGLP
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCC
AHRRSHTLVVLRSLFRYLKREKRIFANPTIRLRPGRVAPAALVPVDADDYQEAVVAATTP
CCCCCHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEEEECCCCHHHHEEEEECCC
QHRVALALAAVHAARPADIRNLRLDDIDLGARRLTIRGHTRRVDELTHRILTQYLDYRRK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
TWPYTANRHLLVTSITANDTRPVSDYTVTQLFGGLKATLGKLSVDRQLEEAITHGPDPLH
CCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAAVFGLSHGTAVRYSEAARVVLNDDRASTAGCGPN
HHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLDWLRHLRHGSRRSKPRQPVTANEYCRVAAPILRDWSKSYGNLREVTSDDICVVIDGLP
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCC
AHRRSHTLVVLRSLFRYLKREKRIFANPTIRLRPGRVAPAALVPVDADDYQEAVVAATTP
CCCCCHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEEEECCCCHHHHEEEEECCC
QHRVALALAAVHAARPADIRNLRLDDIDLGARRLTIRGHTRRVDELTHRILTQYLDYRRK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
TWPYTANRHLLVTSITANDTRPVSDYTVTQLFGGLKATLGKLSVDRQLEEAITHGPDPLH
CCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAAVFGLSHGTAVRYSEAARVVLNDDRASTAGCGPN
HHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA