Click here to switch to the map view.

The map label for this gene is 119776483

Identifier: 119776483

GI number: 119776483

Start: 3977718

End: 3978953

Strand: Direct

Name: 119776483

Synonym: Sama_3351

Alternate gene names: NA

Gene position: 3977718-3978953 (Clockwise)

Preceding gene: 119776480

Following gene: 119776484

Centisome position: 92.37

GC content: 56.23

Gene sequence:

>1236_bases
GTGGACACACAAGGCGTGGACAACGCAGAATTTATCGAAAAGCGCAGGTTTATCATTAAGTTGGGAAAGGCTCTGCACAA
ATTTGGCACGCCGGCCTACCGACTCGAAACCCACTTGCAAAATGTATCCAGAATGTTGGGTATCGAGGGATATTTCCTGA
TATCCCCCACCTCCATGACCTTCGTCCTGCAACACGATGCCGATCAGGAATATAACCACGTCGCCCGGGTGAAGCCCGGT
GAGCTGGATTTGGGCTCCCTCGCCCGCACCGATGAACTGGTGGATGAACTGATCAGCGGCAAGCGCACTCTGCAGGATGC
CATGGACCGCCTGGAAGAAATCATCAATAAACCCAACCCCTATGGCCCACTGCTGACCTTGCTGGCGTTCGGCTCGTCGG
CTGCCGCCTTTGCCATGCTGATGGGTTCGGGTTGGAACGATGTACTCTGGTCGGGTCTGCTCGGGCTGATAGTTTATGCG
CTGGTGTACCGGGCCGAGCGATCCAAACGTATGGCGGAGATGCTGGAGCCGCTGGCCGCCATCGTCTGCGCCCTGGGCGC
CACCTTTATCAGCCAATACGATCCGGGCATCAATATTCCCGTGGTTATCCTGTCGGGCATCATTATCTTCATTCCCGGCC
TCGCCCTGACGCTGGGATTAGCAGAGCTCGCCGCACGGGATTTGATGTCCGGCACCATGCGTATCATGGATGCGGTCATG
CTGCTGTTTAAGCTGTATTTTGGTGCCATTCTCGGGCTGGTTGTGGGCAAGGCCCTGTTTGGTGAGGCCATTTATATGGA
GTCTCAGCCCGTTCCCCGGTTGGCCATCTGGTCGGCGGTACCCATTTTGTCCATGGCGCTGGTGATTATCTTTAAAGCCC
GAATGAAGGACGCGCCATGGGGCGTGCTGGCCGGCATTGTGGCCTTCTTTTCCGCCATGGCCGGCGGTATCTACCTTGGC
GACAGCATAGGTATTTTTATCGGCGCCTTCGCCGTGGGTATTTATTCCAACCTGTTCGCTCGCTGGATGAAGGCACCGGC
CTCCATTGCCCTGCTGCAGGGGATCGTTATTCTGGTTCCCGGCAGCAAAACCTACATAGGCCTGAACGTGCTTATTTCGG
GTGAGACTATGCTCAATCAGGCGCATCTGGGCTCGCAGATTTTCCTGATTTTCATGTCCCTCATTGCCGGGCTCATCTTT
GCCAACGTGGCAGTGCCACCGCGCAGAACCCTCTGA

Upstream 100 bases:

>100_bases
ACTCTTTGAAATGTCATTAAATCCGGTTAACCCCCCGGTTGCAACTTGGGGTATGATCCGCGCGCCCGTGCAGTCGCGGG
CAGGCCGACTAATCTACAGG

Downstream 100 bases:

>100_bases
AAAATAGGGGTTGATGGCCAATGTCATCAACCCCGAAATCCATCCATAGTTGCACTTAAGCTTAAGTAAAATTTTAAGTT
TTTTATTACCTTGCCTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MDTQGVDNAEFIEKRRFIIKLGKALHKFGTPAYRLETHLQNVSRMLGIEGYFLISPTSMTFVLQHDADQEYNHVARVKPG
ELDLGSLARTDELVDELISGKRTLQDAMDRLEEIINKPNPYGPLLTLLAFGSSAAAFAMLMGSGWNDVLWSGLLGLIVYA
LVYRAERSKRMAEMLEPLAAIVCALGATFISQYDPGINIPVVILSGIIIFIPGLALTLGLAELAARDLMSGTMRIMDAVM
LLFKLYFGAILGLVVGKALFGEAIYMESQPVPRLAIWSAVPILSMALVIIFKARMKDAPWGVLAGIVAFFSAMAGGIYLG
DSIGIFIGAFAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNVLISGETMLNQAHLGSQIFLIFMSLIAGLIF
ANVAVPPRRTL

Sequences:

>Translated_411_residues
MDTQGVDNAEFIEKRRFIIKLGKALHKFGTPAYRLETHLQNVSRMLGIEGYFLISPTSMTFVLQHDADQEYNHVARVKPG
ELDLGSLARTDELVDELISGKRTLQDAMDRLEEIINKPNPYGPLLTLLAFGSSAAAFAMLMGSGWNDVLWSGLLGLIVYA
LVYRAERSKRMAEMLEPLAAIVCALGATFISQYDPGINIPVVILSGIIIFIPGLALTLGLAELAARDLMSGTMRIMDAVM
LLFKLYFGAILGLVVGKALFGEAIYMESQPVPRLAIWSAVPILSMALVIIFKARMKDAPWGVLAGIVAFFSAMAGGIYLG
DSIGIFIGAFAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNVLISGETMLNQAHLGSQIFLIFMSLIAGLIF
ANVAVPPRRTL
>Mature_411_residues
MDTQGVDNAEFIEKRRFIIKLGKALHKFGTPAYRLETHLQNVSRMLGIEGYFLISPTSMTFVLQHDADQEYNHVARVKPG
ELDLGSLARTDELVDELISGKRTLQDAMDRLEEIINKPNPYGPLLTLLAFGSSAAAFAMLMGSGWNDVLWSGLLGLIVYA
LVYRAERSKRMAEMLEPLAAIVCALGATFISQYDPGINIPVVILSGIIIFIPGLALTLGLAELAARDLMSGTMRIMDAVM
LLFKLYFGAILGLVVGKALFGEAIYMESQPVPRLAIWSAVPILSMALVIIFKARMKDAPWGVLAGIVAFFSAMAGGIYLG
DSIGIFIGAFAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNVLISGETMLNQAHLGSQIFLIFMSLIAGLIF
ANVAVPPRRTL

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322353, Length=307, Percent_Identity=23.7785016286645, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44589; Mature: 44589

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQGVDNAEFIEKRRFIIKLGKALHKFGTPAYRLETHLQNVSRMLGIEGYFLISPTSMT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEE
FVLQHDADQEYNHVARVKPGELDLGSLARTDELVDELISGKRTLQDAMDRLEEIINKPNP
EEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
YGPLLTLLAFGSSAAAFAMLMGSGWNDVLWSGLLGLIVYALVYRAERSKRMAEMLEPLAA
CHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVCALGATFISQYDPGINIPVVILSGIIIFIPGLALTLGLAELAARDLMSGTMRIMDAVM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFKLYFGAILGLVVGKALFGEAIYMESQPVPRLAIWSAVPILSMALVIIFKARMKDAPW
HHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GVLAGIVAFFSAMAGGIYLGDSIGIFIGAFAVGIYSNLFARWMKAPASIALLQGIVILVP
HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEC
GSKTYIGLNVLISGETMLNQAHLGSQIFLIFMSLIAGLIFANVAVPPRRTL
CCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDTQGVDNAEFIEKRRFIIKLGKALHKFGTPAYRLETHLQNVSRMLGIEGYFLISPTSMT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEE
FVLQHDADQEYNHVARVKPGELDLGSLARTDELVDELISGKRTLQDAMDRLEEIINKPNP
EEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
YGPLLTLLAFGSSAAAFAMLMGSGWNDVLWSGLLGLIVYALVYRAERSKRMAEMLEPLAA
CHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVCALGATFISQYDPGINIPVVILSGIIIFIPGLALTLGLAELAARDLMSGTMRIMDAVM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFKLYFGAILGLVVGKALFGEAIYMESQPVPRLAIWSAVPILSMALVIIFKARMKDAPW
HHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GVLAGIVAFFSAMAGGIYLGDSIGIFIGAFAVGIYSNLFARWMKAPASIALLQGIVILVP
HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEC
GSKTYIGLNVLISGETMLNQAHLGSQIFLIFMSLIAGLIFANVAVPPRRTL
CCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA