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The map label for this gene is ygbA [H]

Identifier: 119776458

GI number: 119776458

Start: 3953446

End: 3953835

Strand: Direct

Name: ygbA [H]

Synonym: Sama_3326

Alternate gene names: 119776458

Gene position: 3953446-3953835 (Clockwise)

Preceding gene: 119776456

Following gene: 119776459

Centisome position: 91.81

GC content: 55.38

Gene sequence:

>390_bases
ATGTCAGAGTCCTTCAGCTTGAGCGGTAATCTGGGACGGGAATTTGCCACCATTTGTGCCATGGTCGCCATCTATTGCCG
GGACCATCATGGCGGCAAAACACCCTGTACCGAGTGTCAGGCCTTTATGGAATACGCCAAGACCCGGCTGGACCGCTGCC
CCTACGGCCAGGAAAAACCCACCTGCAACAAGTGCCCAGTGCATTGCTACAAGCCAGAGCCCCGGGAGCTGGCGCGCCAA
ATCATGCGTTATGCTGGCCCCAGAATGTTACTGCCCCACCCTATCATGGCGATACGGCACCTGTTGCTGGAGCGTAAACC
CGCCCCCGAAAAGCCACCCAAAAATCTTTCAAACCGACATTTGCGGTTACAAAAAGCCGCATCAGAATAA

Upstream 100 bases:

>100_bases
GGCTCTTTTTGTGCGCATCTTCATGCTTTGGCGATCCACTTTTGAGTTGGCCGGGCGCCGGGACTAAGATAAAACCAAGT
AAATTACTTGGGTATTAATC

Downstream 100 bases:

>100_bases
GGCAGGATTGCCACCCGTGTGCACTTGGGCTAAAAGAGGACGTCGAAGAGTCGCTTTTTTAATCACACGAGTGTACCCAC
ATGATGGAGTTTCTGGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSESFSLSGNLGREFATICAMVAIYCRDHHGGKTPCTECQAFMEYAKTRLDRCPYGQEKPTCNKCPVHCYKPEPRELARQ
IMRYAGPRMLLPHPIMAIRHLLLERKPAPEKPPKNLSNRHLRLQKAASE

Sequences:

>Translated_129_residues
MSESFSLSGNLGREFATICAMVAIYCRDHHGGKTPCTECQAFMEYAKTRLDRCPYGQEKPTCNKCPVHCYKPEPRELARQ
IMRYAGPRMLLPHPIMAIRHLLLERKPAPEKPPKNLSNRHLRLQKAASE
>Mature_128_residues
SESFSLSGNLGREFATICAMVAIYCRDHHGGKTPCTECQAFMEYAKTRLDRCPYGQEKPTCNKCPVHCYKPEPRELARQI
MRYAGPRMLLPHPIMAIRHLLLERKPAPEKPPKNLSNRHLRLQKAASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=109, Percent_Identity=45.8715596330275, Blast_Score=102, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 14765; Mature: 14634

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESFSLSGNLGREFATICAMVAIYCRDHHGGKTPCTECQAFMEYAKTRLDRCPYGQEKP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
TCNKCPVHCYKPEPRELARQIMRYAGPRMLLPHPIMAIRHLLLERKPAPEKPPKNLSNRH
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
LRLQKAASE
HHHHHHCCC
>Mature Secondary Structure 
SESFSLSGNLGREFATICAMVAIYCRDHHGGKTPCTECQAFMEYAKTRLDRCPYGQEKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
TCNKCPVHCYKPEPRELARQIMRYAGPRMLLPHPIMAIRHLLLERKPAPEKPPKNLSNRH
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
LRLQKAASE
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]