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The map label for this gene is bepC [H]

Identifier: 119776393

GI number: 119776393

Start: 3869538

End: 3870947

Strand: Direct

Name: bepC [H]

Synonym: Sama_3261

Alternate gene names: 119776393

Gene position: 3869538-3870947 (Clockwise)

Preceding gene: 119776392

Following gene: 119776394

Centisome position: 89.86

GC content: 53.62

Gene sequence:

>1410_bases
ATGAACAAGAAACGCTTGCAACAGTTGCGCTTGGGCGTACTGGCTGCAGCCATAGGCGGCATCATGATGCCTATGGCTGC
AAGTGCCATGACGCTTGAACAGGCCGTCGCCCACACGCTGGACAGCAACCCTGACCTGCGTGCTGCTTTCAACCGCTTTA
AAGCGCGTGAAGAGCAGGTAAGTCAGGCGATTTCCGGCTATATGCCTACGGTAGATATCACCGGTGGCTGGGGCTGGGAA
CAAACGGACAGTCCAGCAACACGTCGTCGTTTCGGCCGTGAAGATGGTGACTTTGAACTCAAGCGCGGTGAAGCCGGTAT
CAGCATCCGTCAGATGCTGTTCGATGGTTTTTATACGGCCAGCGAAGTAGATCGCCTGAGCTTTGAAGCCAGTGCAGATC
AGTGGGCCTTGTTCGCCGCTGCTGAGGATATGGCGCTGGATGTGGCGAAAGTGTACGTCAATTACATCCGTGCCGAGCAG
GTGATGACGCTGGCGGAGAAAAACCTGGCGACTCACAAAGAAATCTATGACCAAATCAAGCAGCGTACTGATTCTGGTCT
GGGTTCTATTGCTGACTTGTCTCAAATTACCGGTCGTTTGGCCCGCGCCAACGCCAACGTGATTTCAGCGCGTAATAATT
TCTTCGATGCCAAGGCGCAGTTCGCCCGCGTGGTAGATAAAGCACCCGACGACATGATTGTACCTGTACCGGATGCCGAT
ATGCTGCCAACTGACTTGTCCACCAGTGTATCTTTGGCGCAGGAGAACCATCCGGTGCTCAAGTCGGCCGCTGCCGACAT
CAACGCAGCCGAGAACGAGCGCTCATCGGCGCAATCGAGCTACTATCCACGCGTTACGCTTGAGCTCGACGGGAACTGGA
ACAACAACCTTGATGGCGAAGATGGTATCGCAGGCACTGGCGCCTTCCGTACCGATGTTGGTGGTTATAACAACGACCTG
GTTGCCATGGTGCGTGTACGTTACAACCTGTTCGCCGGCGGTAAAGATCTCGCCCGTGAAAAAGAAGCTGCCTACAAAAT
CGGTGAGGCCAAAGAAATTCGCCAACGCGCTTACCGCGAAGTCGTTGAAGGCGTCAACCTGGCATGGAATGCCTATGAAA
TGCTGACACCACAAAAAGACTACATCCGTGAACATGTGAAAGCGGCGAAGGACACACAAGTGGCTTACACCCAACAGTTC
AATCTGGGTCAGCGCACCTTACTCGACTTGCTGGATACCGAAAACGAACTCTTTGAAGCCCGTAAAGACTATCTGCAGGC
TGAGTTCGATGAGATTGTCGCCAAGTATCGGGTACTGAATGCCACCGGTCGCCTGTTGGATTCACTGAAGGTAACCAGAC
CCACGGTATGGCAGGGAGAGCGTGAATATGAAGGGGGAGTAAAACCATGA

Upstream 100 bases:

>100_bases
AAAGATCTATTCTTGAATACATACTTAATCCAATTCTAAGAGCCAAAGACACCGCACTTAGGGAACGATGAGGCTCTAAC
TAAACCGGGAGGGTTTATCA

Downstream 100 bases:

>100_bases
GAATGACTTTATTGATGTTGGCTCTGCTGAGCCTTGGCGCTTGTTCTATGCGCGATACCGTGAGTATGGATCAGCCTACA
ACACAGGTATTTGATCTGAA

Product: type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNKKRLQQLRLGVLAAAIGGIMMPMAASAMTLEQAVAHTLDSNPDLRAAFNRFKAREEQVSQAISGYMPTVDITGGWGWE
QTDSPATRRRFGREDGDFELKRGEAGISIRQMLFDGFYTASEVDRLSFEASADQWALFAAAEDMALDVAKVYVNYIRAEQ
VMTLAEKNLATHKEIYDQIKQRTDSGLGSIADLSQITGRLARANANVISARNNFFDAKAQFARVVDKAPDDMIVPVPDAD
MLPTDLSTSVSLAQENHPVLKSAAADINAAENERSSAQSSYYPRVTLELDGNWNNNLDGEDGIAGTGAFRTDVGGYNNDL
VAMVRVRYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYREVVEGVNLAWNAYEMLTPQKDYIREHVKAAKDTQVAYTQQF
NLGQRTLLDLLDTENELFEARKDYLQAEFDEIVAKYRVLNATGRLLDSLKVTRPTVWQGEREYEGGVKP

Sequences:

>Translated_469_residues
MNKKRLQQLRLGVLAAAIGGIMMPMAASAMTLEQAVAHTLDSNPDLRAAFNRFKAREEQVSQAISGYMPTVDITGGWGWE
QTDSPATRRRFGREDGDFELKRGEAGISIRQMLFDGFYTASEVDRLSFEASADQWALFAAAEDMALDVAKVYVNYIRAEQ
VMTLAEKNLATHKEIYDQIKQRTDSGLGSIADLSQITGRLARANANVISARNNFFDAKAQFARVVDKAPDDMIVPVPDAD
MLPTDLSTSVSLAQENHPVLKSAAADINAAENERSSAQSSYYPRVTLELDGNWNNNLDGEDGIAGTGAFRTDVGGYNNDL
VAMVRVRYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYREVVEGVNLAWNAYEMLTPQKDYIREHVKAAKDTQVAYTQQF
NLGQRTLLDLLDTENELFEARKDYLQAEFDEIVAKYRVLNATGRLLDSLKVTRPTVWQGEREYEGGVKP
>Mature_469_residues
MNKKRLQQLRLGVLAAAIGGIMMPMAASAMTLEQAVAHTLDSNPDLRAAFNRFKAREEQVSQAISGYMPTVDITGGWGWE
QTDSPATRRRFGREDGDFELKRGEAGISIRQMLFDGFYTASEVDRLSFEASADQWALFAAAEDMALDVAKVYVNYIRAEQ
VMTLAEKNLATHKEIYDQIKQRTDSGLGSIADLSQITGRLARANANVISARNNFFDAKAQFARVVDKAPDDMIVPVPDAD
MLPTDLSTSVSLAQENHPVLKSAAADINAAENERSSAQSSYYPRVTLELDGNWNNNLDGEDGIAGTGAFRTDVGGYNNDL
VAMVRVRYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYREVVEGVNLAWNAYEMLTPQKDYIREHVKAAKDTQVAYTQQF
NLGQRTLLDLLDTENELFEARKDYLQAEFDEIVAKYRVLNATGRLLDSLKVTRPTVWQGEREYEGGVKP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=420, Percent_Identity=22.8571428571429, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52211; Mature: 52211

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRLQQLRLGVLAAAIGGIMMPMAASAMTLEQAVAHTLDSNPDLRAAFNRFKAREEQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SQAISGYMPTVDITGGWGWEQTDSPATRRRFGREDGDFELKRGEAGISIRQMLFDGFYTA
HHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCH
SEVDRLSFEASADQWALFAAAEDMALDVAKVYVNYIRAEQVMTLAEKNLATHKEIYDQIK
HHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTDSGLGSIADLSQITGRLARANANVISARNNFFDAKAQFARVVDKAPDDMIVPVPDAD
HHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCC
MLPTDLSTSVSLAQENHPVLKSAAADINAAENERSSAQSSYYPRVTLELDGNWNNNLDGE
CCCCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
DGIAGTGAFRTDVGGYNNDLVAMVRVRYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYRE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
VVEGVNLAWNAYEMLTPQKDYIREHVKAAKDTQVAYTQQFNLGQRTLLDLLDTENELFEA
HHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEHHHHCCCCHHHHHHHHCCHHHHHHH
RKDYLQAEFDEIVAKYRVLNATGRLLDSLKVTRPTVWQGEREYEGGVKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MNKKRLQQLRLGVLAAAIGGIMMPMAASAMTLEQAVAHTLDSNPDLRAAFNRFKAREEQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SQAISGYMPTVDITGGWGWEQTDSPATRRRFGREDGDFELKRGEAGISIRQMLFDGFYTA
HHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCH
SEVDRLSFEASADQWALFAAAEDMALDVAKVYVNYIRAEQVMTLAEKNLATHKEIYDQIK
HHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTDSGLGSIADLSQITGRLARANANVISARNNFFDAKAQFARVVDKAPDDMIVPVPDAD
HHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCC
MLPTDLSTSVSLAQENHPVLKSAAADINAAENERSSAQSSYYPRVTLELDGNWNNNLDGE
CCCCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
DGIAGTGAFRTDVGGYNNDLVAMVRVRYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYRE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
VVEGVNLAWNAYEMLTPQKDYIREHVKAAKDTQVAYTQQFNLGQRTLLDLLDTENELFEA
HHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEHHHHCCCCHHHHHHHHCCHHHHHHH
RKDYLQAEFDEIVAKYRVLNATGRLLDSLKVTRPTVWQGEREYEGGVKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]