Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is cysN [H]

Identifier: 119776022

GI number: 119776022

Start: 3432116

End: 3433525

Strand: Reverse

Name: cysN [H]

Synonym: Sama_2890

Alternate gene names: 119776022

Gene position: 3433525-3432116 (Counterclockwise)

Preceding gene: 119776023

Following gene: 119776021

Centisome position: 79.74

GC content: 56.45

Gene sequence:

>1410_bases
ATGTCTATTGCACAGCAAGTTAAAGATCTTGGTATTGAGCAATACCTGGAAAGACAACAGCATAAGTCGCTGCTTAAATT
CCTCACCTGTGGCTCTGTGGACGATGGCAAGTCGACCCTGATTGGTCGTCTGCTGCACGACAGCGCCCAGATTTACGAGG
ATCAGCTGGCCGCCCTGTCCAAAGACTCCAAGGTACACGGTACCACGGGTGAGGCCATCGATTTGGCGCTGCTGGTAGAC
GGCCTGCAGGCCGAGCGCGAGCAGGGCATCACCATCGATGTGGCTTACCGCTATTTCTCCACCGAGAAGCGCAAGTTCAT
CATCGCCGACACCCCCGGCCACGAACAGTACACCCGCAATATGGCCACGGGCGCGTCCAACTGCGACCTGGCCATCATTC
TGGTGGATGCCCGCTACGGCGTGCAAACCCAGACCCGTCGCCACAGCTTTATCTGCTCGCTTTTGGGCATCAAGCAGTTT
GTGGTGGCCGTCAACAAGATGGACTTGCTGGGCTTTGATGAAGCGCGCTTTGAAGAAATCAAACGCGAGTATCTCGCCTT
TGCCGAGCAGCTTAAGGTACCGGACATCAAGTTTGTGCCCCTGTCGGCCCTCAAGGGCGACAACGTGGTCAGCCGCTCAG
AGCAAAGCCCCTGGTACAGCGGCGAAACCTTGCTGTCGATTCTCGAAAATGCCCCGGTTACCGGTGCCAACCGTGACTTT
GAAGCCCGCCTGCCGGTGCAGTACGTGAGCCGCCCGAACCTGGATTTCCGTGGTTTTGCCGGCACCATTGCCAGCGGCAG
TTTCAAAGTGGGTGATGCGGTCAAGGCCCTGCCTTCCGGTAAAGCCTCCACGGTTAAAAGCATTGTCACTTTCGATGGTG
AGCTTGGTGAGGCCTTTGCCGGTCAGGCCGTGACCCTGACGCTGAATGATGAAATCGATATCAGCCGTGGCGATGTGATA
GTGCCTGCATCAAGCGATGTGACCGTATCCAATCGGCTGCTGGCCAAGGTGGTGTGGATGCACGAGCAGCCACTGACTCC
GGGTAAGCAGTACAACATCAAGCTGGGTACCCGTAAGGTGCCGGGTACGGTGCGCCACATCATTCACAGCATAGATGTGA
ACACCTTGGCCGAAGACAAGGCCACAGCGCTGCCACTCAATGGCATTGCCCTGGTGGAGCTTGAGCTGGATGAAGCCGTG
GTGTTTGACCCCTACCAGGATAACCGCGATACCGGTGGATTTATCTTTATCGACCGTATCAGCAACATCACAGTGGGCGC
AGGACTGGTGGAAAGCGCGCTGGAAGCCGAGCACAAAACGACGGATTTCAGTGAGTTTGAGCTTGAGCTCAATGCCCTTA
TCCGCAAGCACTTCCCCCACTGGCAGGCGCTGGATATCAGTAAGCAGTAG

Upstream 100 bases:

>100_bases
AAGAGATGCTGCTGTCCCGCTCCAGTGAGCGTCAGGGCAGGGTGATTGACCACGATTCATCGGGTTCCATGGAAAAGAAA
AAGCGCGAGGGGTATTTCTG

Downstream 100 bases:

>100_bases
CGGCTGATGCCACCAGATACACAGCGGGCCCTCGGGCCCGTTTTTTCCCGGATACAAGGATAAGGCTATGACGCTGGAGC
AATATTGGGTAATAGGCATG

Product: Sulfate adenylyltransferase

Products: NA

Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT [H]

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALSKDSKVHGTTGEAIDLALLVD
GLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQF
VVAVNKMDLLGFDEARFEEIKREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF
EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFAGQAVTLTLNDEIDISRGDVI
VPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKVPGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAV
VFDPYQDNRDTGGFIFIDRISNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ

Sequences:

>Translated_469_residues
MSIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALSKDSKVHGTTGEAIDLALLVD
GLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQF
VVAVNKMDLLGFDEARFEEIKREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF
EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFAGQAVTLTLNDEIDISRGDVI
VPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKVPGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAV
VFDPYQDNRDTGGFIFIDRISNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ
>Mature_468_residues
SIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALSKDSKVHGTTGEAIDLALLVDG
LQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQFV
VAVNKMDLLGFDEARFEEIKREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDFE
ARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFAGQAVTLTLNDEIDISRGDVIV
PASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKVPGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAVV
FDPYQDNRDTGGFIFIDRISNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ

Specific function: May be the GTPase, regulating ATP sulfurylase activity [H]

COG id: COG2895

COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily [H]

Homologues:

Organism=Homo sapiens, GI223555963, Length=431, Percent_Identity=31.554524361949, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI5729864, Length=431, Percent_Identity=31.554524361949, Blast_Score=191, Evalue=8e-49,
Organism=Homo sapiens, GI4503475, Length=436, Percent_Identity=27.9816513761468, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI4503471, Length=325, Percent_Identity=32, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI194018522, Length=418, Percent_Identity=26.555023923445, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI194018520, Length=418, Percent_Identity=26.555023923445, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI194097354, Length=420, Percent_Identity=27.1428571428571, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI46094014, Length=416, Percent_Identity=26.9230769230769, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI34147630, Length=313, Percent_Identity=30.3514376996805, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI157426893, Length=343, Percent_Identity=23.6151603498542, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1789108, Length=468, Percent_Identity=62.8205128205128, Blast_Score=593, Evalue=1e-170,
Organism=Escherichia coli, GI1790412, Length=434, Percent_Identity=25.5760368663594, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789737, Length=434, Percent_Identity=25.5760368663594, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI2367247, Length=298, Percent_Identity=27.1812080536913, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115532067, Length=438, Percent_Identity=29.4520547945205, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI115532065, Length=438, Percent_Identity=29.4520547945205, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI32566629, Length=434, Percent_Identity=29.0322580645161, Blast_Score=157, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17552884, Length=436, Percent_Identity=29.5871559633028, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17569207, Length=436, Percent_Identity=29.5871559633028, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32566303, Length=429, Percent_Identity=27.972027972028, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI25141371, Length=286, Percent_Identity=26.5734265734266, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32566301, Length=138, Percent_Identity=36.9565217391304, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17556456, Length=346, Percent_Identity=26.878612716763, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322937, Length=414, Percent_Identity=31.1594202898551, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6325337, Length=330, Percent_Identity=31.5151515151515, Blast_Score=160, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6319594, Length=330, Percent_Identity=31.5151515151515, Blast_Score=160, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6320377, Length=426, Percent_Identity=26.2910798122066, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324761, Length=290, Percent_Identity=29.6551724137931, Blast_Score=87, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6323320, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45550900, Length=431, Percent_Identity=28.7703016241299, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI45553807, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI45553816, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24651721, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI17864154, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24652838, Length=314, Percent_Identity=31.8471337579618, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI17137572, Length=314, Percent_Identity=31.8471337579618, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI17137380, Length=433, Percent_Identity=24.7113163972286, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281363316, Length=431, Percent_Identity=27.6102088167053, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17864358, Length=431, Percent_Identity=27.6102088167053, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI19921738, Length=159, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR011779
- InterPro:   IPR009001
- InterPro:   IPR004161
- InterPro:   IPR009000 [H]

Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]

EC number: =2.7.7.4 [H]

Molecular weight: Translated: 51667; Mature: 51536

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00301 EFACTOR_GTP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALS
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
KDSKVHGTTGEAIDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRN
CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH
MATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQFVVAVNKMDLLGFDEARFEEI
HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHH
KREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF
HHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFA
CCCCCHHHHCCCCCCCCCCCCEECCCCEECCHHHHHCCCCCHHHHHHHHEECCCCCHHHC
GQAVTLTLNDEIDISRGDVIVPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKV
CCEEEEEECCCEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
PGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAVVFDPYQDNRDTGGFIFIDRI
CHHHHHHHHHCCCCHHCCCCCCEECCCCEEEEEEECCCEEEECCCCCCCCCCCEEEEEEC
SNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ
CCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure 
SIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALS
CHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
KDSKVHGTTGEAIDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRN
CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH
MATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQFVVAVNKMDLLGFDEARFEEI
HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHH
KREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF
HHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFA
CCCCCHHHHCCCCCCCCCCCCEECCCCEECCHHHHHCCCCCHHHHHHHHEECCCCCHHHC
GQAVTLTLNDEIDISRGDVIVPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKV
CCEEEEEECCCEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
PGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAVVFDPYQDNRDTGGFIFIDRI
CHHHHHHHHHCCCCHHCCCCCCEECCCCEEEEEEECCCEEEECCCCCCCCCCCEEEEEEC
SNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ
CCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA