| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cysN [H]
Identifier: 119776022
GI number: 119776022
Start: 3432116
End: 3433525
Strand: Reverse
Name: cysN [H]
Synonym: Sama_2890
Alternate gene names: 119776022
Gene position: 3433525-3432116 (Counterclockwise)
Preceding gene: 119776023
Following gene: 119776021
Centisome position: 79.74
GC content: 56.45
Gene sequence:
>1410_bases ATGTCTATTGCACAGCAAGTTAAAGATCTTGGTATTGAGCAATACCTGGAAAGACAACAGCATAAGTCGCTGCTTAAATT CCTCACCTGTGGCTCTGTGGACGATGGCAAGTCGACCCTGATTGGTCGTCTGCTGCACGACAGCGCCCAGATTTACGAGG ATCAGCTGGCCGCCCTGTCCAAAGACTCCAAGGTACACGGTACCACGGGTGAGGCCATCGATTTGGCGCTGCTGGTAGAC GGCCTGCAGGCCGAGCGCGAGCAGGGCATCACCATCGATGTGGCTTACCGCTATTTCTCCACCGAGAAGCGCAAGTTCAT CATCGCCGACACCCCCGGCCACGAACAGTACACCCGCAATATGGCCACGGGCGCGTCCAACTGCGACCTGGCCATCATTC TGGTGGATGCCCGCTACGGCGTGCAAACCCAGACCCGTCGCCACAGCTTTATCTGCTCGCTTTTGGGCATCAAGCAGTTT GTGGTGGCCGTCAACAAGATGGACTTGCTGGGCTTTGATGAAGCGCGCTTTGAAGAAATCAAACGCGAGTATCTCGCCTT TGCCGAGCAGCTTAAGGTACCGGACATCAAGTTTGTGCCCCTGTCGGCCCTCAAGGGCGACAACGTGGTCAGCCGCTCAG AGCAAAGCCCCTGGTACAGCGGCGAAACCTTGCTGTCGATTCTCGAAAATGCCCCGGTTACCGGTGCCAACCGTGACTTT GAAGCCCGCCTGCCGGTGCAGTACGTGAGCCGCCCGAACCTGGATTTCCGTGGTTTTGCCGGCACCATTGCCAGCGGCAG TTTCAAAGTGGGTGATGCGGTCAAGGCCCTGCCTTCCGGTAAAGCCTCCACGGTTAAAAGCATTGTCACTTTCGATGGTG AGCTTGGTGAGGCCTTTGCCGGTCAGGCCGTGACCCTGACGCTGAATGATGAAATCGATATCAGCCGTGGCGATGTGATA GTGCCTGCATCAAGCGATGTGACCGTATCCAATCGGCTGCTGGCCAAGGTGGTGTGGATGCACGAGCAGCCACTGACTCC GGGTAAGCAGTACAACATCAAGCTGGGTACCCGTAAGGTGCCGGGTACGGTGCGCCACATCATTCACAGCATAGATGTGA ACACCTTGGCCGAAGACAAGGCCACAGCGCTGCCACTCAATGGCATTGCCCTGGTGGAGCTTGAGCTGGATGAAGCCGTG GTGTTTGACCCCTACCAGGATAACCGCGATACCGGTGGATTTATCTTTATCGACCGTATCAGCAACATCACAGTGGGCGC AGGACTGGTGGAAAGCGCGCTGGAAGCCGAGCACAAAACGACGGATTTCAGTGAGTTTGAGCTTGAGCTCAATGCCCTTA TCCGCAAGCACTTCCCCCACTGGCAGGCGCTGGATATCAGTAAGCAGTAG
Upstream 100 bases:
>100_bases AAGAGATGCTGCTGTCCCGCTCCAGTGAGCGTCAGGGCAGGGTGATTGACCACGATTCATCGGGTTCCATGGAAAAGAAA AAGCGCGAGGGGTATTTCTG
Downstream 100 bases:
>100_bases CGGCTGATGCCACCAGATACACAGCGGGCCCTCGGGCCCGTTTTTTCCCGGATACAAGGATAAGGCTATGACGCTGGAGC AATATTGGGTAATAGGCATG
Product: Sulfate adenylyltransferase
Products: NA
Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALSKDSKVHGTTGEAIDLALLVD GLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQF VVAVNKMDLLGFDEARFEEIKREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFAGQAVTLTLNDEIDISRGDVI VPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKVPGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAV VFDPYQDNRDTGGFIFIDRISNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ
Sequences:
>Translated_469_residues MSIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALSKDSKVHGTTGEAIDLALLVD GLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQF VVAVNKMDLLGFDEARFEEIKREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFAGQAVTLTLNDEIDISRGDVI VPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKVPGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAV VFDPYQDNRDTGGFIFIDRISNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ >Mature_468_residues SIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALSKDSKVHGTTGEAIDLALLVDG LQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQFV VAVNKMDLLGFDEARFEEIKREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDFE ARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFAGQAVTLTLNDEIDISRGDVIV PASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKVPGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAVV FDPYQDNRDTGGFIFIDRISNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ
Specific function: May be the GTPase, regulating ATP sulfurylase activity [H]
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI223555963, Length=431, Percent_Identity=31.554524361949, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI5729864, Length=431, Percent_Identity=31.554524361949, Blast_Score=191, Evalue=8e-49, Organism=Homo sapiens, GI4503475, Length=436, Percent_Identity=27.9816513761468, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI4503471, Length=325, Percent_Identity=32, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI194018522, Length=418, Percent_Identity=26.555023923445, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI194018520, Length=418, Percent_Identity=26.555023923445, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI194097354, Length=420, Percent_Identity=27.1428571428571, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI46094014, Length=416, Percent_Identity=26.9230769230769, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI34147630, Length=313, Percent_Identity=30.3514376996805, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI157426893, Length=343, Percent_Identity=23.6151603498542, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789108, Length=468, Percent_Identity=62.8205128205128, Blast_Score=593, Evalue=1e-170, Organism=Escherichia coli, GI1790412, Length=434, Percent_Identity=25.5760368663594, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789737, Length=434, Percent_Identity=25.5760368663594, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI2367247, Length=298, Percent_Identity=27.1812080536913, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115532067, Length=438, Percent_Identity=29.4520547945205, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI115532065, Length=438, Percent_Identity=29.4520547945205, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI32566629, Length=434, Percent_Identity=29.0322580645161, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17552884, Length=436, Percent_Identity=29.5871559633028, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17569207, Length=436, Percent_Identity=29.5871559633028, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI32566303, Length=429, Percent_Identity=27.972027972028, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI25141371, Length=286, Percent_Identity=26.5734265734266, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI32566301, Length=138, Percent_Identity=36.9565217391304, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17556456, Length=346, Percent_Identity=26.878612716763, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322937, Length=414, Percent_Identity=31.1594202898551, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6325337, Length=330, Percent_Identity=31.5151515151515, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6319594, Length=330, Percent_Identity=31.5151515151515, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320377, Length=426, Percent_Identity=26.2910798122066, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6324761, Length=290, Percent_Identity=29.6551724137931, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6323320, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45550900, Length=431, Percent_Identity=28.7703016241299, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI45553807, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI45553816, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24651721, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI17864154, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24652838, Length=314, Percent_Identity=31.8471337579618, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI17137572, Length=314, Percent_Identity=31.8471337579618, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI17137380, Length=433, Percent_Identity=24.7113163972286, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI281363316, Length=431, Percent_Identity=27.6102088167053, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI17864358, Length=431, Percent_Identity=27.6102088167053, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI19921738, Length=159, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 51667; Mature: 51536
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALS CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC KDSKVHGTTGEAIDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRN CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH MATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQFVVAVNKMDLLGFDEARFEEI HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHH KREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF HHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFA CCCCCHHHHCCCCCCCCCCCCEECCCCEECCHHHHHCCCCCHHHHHHHHEECCCCCHHHC GQAVTLTLNDEIDISRGDVIVPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKV CCEEEEEECCCEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC PGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAVVFDPYQDNRDTGGFIFIDRI CHHHHHHHHHCCCCHHCCCCCCEECCCCEEEEEEECCCEEEECCCCCCCCCCCEEEEEEC SNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ CCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure SIAQQVKDLGIEQYLERQQHKSLLKFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLAALS CHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC KDSKVHGTTGEAIDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRN CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH MATGASNCDLAIILVDARYGVQTQTRRHSFICSLLGIKQFVVAVNKMDLLGFDEARFEEI HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHH KREYLAFAEQLKVPDIKFVPLSALKGDNVVSRSEQSPWYSGETLLSILENAPVTGANRDF HHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC EARLPVQYVSRPNLDFRGFAGTIASGSFKVGDAVKALPSGKASTVKSIVTFDGELGEAFA CCCCCHHHHCCCCCCCCCCCCEECCCCEECCHHHHHCCCCCHHHHHHHHEECCCCCHHHC GQAVTLTLNDEIDISRGDVIVPASSDVTVSNRLLAKVVWMHEQPLTPGKQYNIKLGTRKV CCEEEEEECCCEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC PGTVRHIIHSIDVNTLAEDKATALPLNGIALVELELDEAVVFDPYQDNRDTGGFIFIDRI CHHHHHHHHHCCCCHHCCCCCCEECCCCEEEEEEECCCEEEECCCCCCCCCCCEEEEEEC SNITVGAGLVESALEAEHKTTDFSEFELELNALIRKHFPHWQALDISKQ CCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA